Guide to the Human Genome
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Name: HSPA2 Sequence: fasta or formatted (639aa) NCBI GI: 13676857
Description:

heat shock 70kDa protein 2

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         49           3
 C cysteine            0.8          5           1
 D aspartate           7.0         45           2
 E glutamate           7.7         49           2
 F phenylalanine       3.3         21           2
 G glycine             9.1         58           4
 H histidine           1.1          7           1
 I isoleucine          7.2         46           2
 K lysine              8.1         52           2
 L leucine             7.0         45           4
 M methionine          1.6         10           1
 N asparagine          4.9         31           2
 P proline             3.4         22           2
 Q glutamine           4.1         26           1
 R arginine            5.0         32           2
 S serine              5.3         34           3
 T threonine           7.5         48           2
 V valine              6.4         41           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heat shock 70kDa protein 2 
HSPA8                 0.877   heat shock 70kDa protein 8 isoform 1 
HSPA1B                0.845   heat shock 70kDa protein 1B 
HSPA1A                0.845   heat shock 70kDa protein 1A 
HSPA1L                0.829   heat shock 70kDa protein 1-like 
HSPA6                 0.799   heat shock 70kDa protein 6 (HSP70B') 
HSPA8                 0.658   heat shock 70kDa protein 8 isoform 2 
HSPA5                 0.615   heat shock 70kDa protein 5 
HSPA9                 0.443   heat shock 70kDa protein 9 precursor 
HSPA14                0.239   heat shock 70kDa protein 14 isoform 1 
HSPA13                0.203   heat shock protein 70kDa family member 13 precursor ...
HSPA4                 0.199   heat shock 70kDa protein 4 
HSPA4L                0.189   heat shock 70kDa protein 4-like 
HSPH1                 0.186   heat shock 105kD 
HYOU1                 0.154   hypoxia up-regulated 1 precursor 
HYOU1                 0.154   hypoxia up-regulated 1 precursor 
ANKRD45               0.017   ankyrin repeat domain 45 
AEBP2                 0.012   AE binding protein 2 isoform b 
AEBP2                 0.012   AE binding protein 2 isoform a 
SFRS12                0.012   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.012   splicing factor, arginine/serine-rich 12 isoform b [...
KIF15                 0.010   kinesin family member 15 
FOXA1                 0.009   forkhead box A1 
ARIH1                 0.009   ariadne ubiquitin-conjugating enzyme E2 binding pro...
KRT1                  0.009   keratin 1 
GOLGB1                0.009   golgi autoantigen, golgin subfamily b, macrogolgin ...
ONECUT2               0.008   one cut domain, family member 2 
ZSWIM5                0.008   zinc finger, SWIM domain containing 5 
MBD2                  0.008   methyl-CpG binding domain protein 2 testis-specific i...
MBD2                  0.008   methyl-CpG binding domain protein 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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