Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ANKRD45 Sequence: fasta or formatted (266aa) NCBI GI: 38348298
Description:

ankyrin repeat domain 45

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         24           3
 C cysteine            1.9          5           1
 D aspartate           5.6         15           2
 E glutamate          13.9         37           4
 F phenylalanine       2.6          7           2
 G glycine             4.1         11           1
 H histidine           1.9          5           2
 I isoleucine          3.4          9           1
 K lysine              6.4         17           2
 L leucine            10.5         28           3
 M methionine          1.5          4           1
 N asparagine          4.1         11           1
 P proline             3.8         10           2
 Q glutamine           5.6         15           2
 R arginine            4.5         12           1
 S serine              6.0         16           2
 T threonine           7.1         19           2
 V valine              4.9         13           1
 W tryptophan          1.1          3           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 45 
HSPA5                 0.069   heat shock 70kDa protein 5 
TP53BP2               0.065   tumor protein p53 binding protein, 2 isoform 1 [Hom...
TP53BP2               0.065   tumor protein p53 binding protein, 2 isoform 2 
ANKRD55               0.063   ankyrin repeat domain 55 isoform 1 
PPP1R13B              0.061   apoptosis-stimulating protein of p53, 1 
LOC100287718          0.057   hypothetical protein LOC100287718 
LOC100293913          0.057   PREDICTED: similar to ankyrin repeat domain 2 [Homo...
ANK1                  0.057   ankyrin 1 isoform 9 
ANK1                  0.057   ankyrin 1 isoform 1 
ANK1                  0.057   ankyrin 1 isoform 3 
ANK1                  0.057   ankyrin 1 isoform 2 
ANK1                  0.057   ankyrin 1 isoform 4 
ANKRD44               0.053   ankyrin repeat domain 44 
ANKS1A                0.051   ankyrin repeat and sterile alpha motif domain conta...
ANKDD1A               0.051   ankyrin repeat and death domain containing 1A 
PSMD10                0.049   proteasome 26S non-ATPase subunit 10 isoform 1 
PSMD10                0.049   proteasome 26S non-ATPase subunit 10 isform 2 
RIPK4                 0.049   ankyrin repeat domain 3 
FEM1C                 0.049   feminization 1 homolog a 
NFKBIL2               0.049   NF-kappa-B inhibitor-like protein 2 
MYO16                 0.047   myosin heavy chain Myr 8 
PPP1R12A              0.047   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.047   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.047   protein phosphatase 1, regulatory (inhibitor) subunit...
FEM1B                 0.047   fem-1 homolog b 
ANKRD42               0.047   ankyrin repeat domain 42 
PPP1R16B              0.047   protein phosphatase 1 regulatory inhibitor subunit 1...
ANK2                  0.045   ankyrin 2 isoform 3 
ANK2                  0.045   ankyrin 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press