CTDP1 34711

Name: CTDP1	Sequence: fasta or formatted (867aa)		NCBI GI: 67188550
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 isoform FCP1b		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [961aa] CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) p...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.0 87 3 C cysteine 1.8 16 1 D aspartate 4.8 42 2 E glutamate 8.9 77 6 F phenylalanine 2.2 19 1 G glycine 9.1 79 2 H histidine 2.8 24 1 I isoleucine 2.8 24 2 K lysine 4.3 37 2 L leucine 8.1 70 2 M methionine 1.3 11 1 N asparagine 2.0 17 1 P proline 8.7 75 2 Q glutamine 4.6 40 2 R arginine 7.8 68 3 S serine 8.3 72 4 T threonine 4.7 41 2 V valine 5.8 50 2 W tryptophan 0.8 7 1 Y tyrosine 1.3 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDP1 0.929 CTD (carboxy-terminal domain, RNA polymerase II, pol... PRB3 0.023 proline-rich protein BstNI subfamily 3 precursor [H... RPGR 0.021 retinitis pigmentosa GTPase regulator isoform C [Hom... PRB2 0.021 proline-rich protein BstNI subfamily 2 CTDSPL2 0.020 CTD (carboxy-terminal domain, RNA polymerase II, po... RP1L1 0.019 retinitis pigmentosa 1-like 1 CCDC96 0.019 coiled-coil domain containing 96 PRB4 0.018 proline-rich protein BstNI subfamily 4 precursor [Ho... PRB1 0.017 proline-rich protein BstNI subfamily 1 isoform 1 pre... TGOLN2 0.016 trans-golgi network protein 2 APC2 0.016 adenomatosis polyposis coli 2 OGFR 0.016 opioid growth factor receptor TNRC18 0.014 trinucleotide repeat containing 18 COL25A1 0.014 collagen, type XXV, alpha 1 isoform 1 COL25A1 0.014 collagen, type XXV, alpha 1 isoform 2 COL5A1 0.014 alpha 1 type V collagen preproprotein COL9A3 0.014 alpha 3 type IX collagen SLC24A1 0.013 solute carrier family 24 (sodium/potassium/calcium ex... SMTNL1 0.013 smoothelin-like 1 C1orf173 0.013 hypothetical protein LOC127254 MARCO 0.013 macrophage receptor with collagenous structure PCLO 0.013 piccolo isoform 2 PCLO 0.013 piccolo isoform 1 DULLARD 0.013 dullard homolog DULLARD 0.013 dullard homolog COL2A1 0.013 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.013 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL3A1 0.013 collagen type III alpha 1 preproprotein TNIK 0.013 TRAF2 and NCK interacting kinase isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.