Guide to the Human Genome
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Name: NME2 Sequence: fasta or formatted (152aa) NCBI GI: 66392227
Description:

nucleoside diphosphate kinase B

Referenced in:

Nuclear Receptors
Nucleotide Pathways

Other entries for this name:
alt mRNA [152aa] nucleoside diphosphate kinase B
alt mRNA [152aa] nucleoside diphosphate kinase B
alt mRNA [152aa] nucleoside diphosphate kinase B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3          8           1
 C cysteine            1.3          2           1
 D aspartate           5.3          8           1
 E glutamate           7.9         12           2
 F phenylalanine       5.3          8           2
 G glycine             8.6         13           1
 H histidine           2.6          4           1
 I isoleucine          6.6         10           2
 K lysine              8.6         13           1
 L leucine             7.2         11           1
 M methionine          3.3          5           1
 N asparagine          3.3          5           1
 P proline             4.6          7           1
 Q glutamine           2.6          4           1
 R arginine            5.9          9           1
 S serine              5.3          8           1
 T threonine           2.6          4           1
 V valine              9.2         14           2
 W tryptophan          2.0          3           1
 Y tyrosine            2.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleoside diphosphate kinase B 
NME2                  1.000   nucleoside diphosphate kinase B 
NME2                  1.000   nucleoside diphosphate kinase B 
NME2                  1.000   nucleoside diphosphate kinase B 
NME1-NME2             1.000   NME1-NME2 protein 
NME1                  0.889   non-metastatic cells 1, protein (NM23A) expressed in...
NME1                  0.889   non-metastatic cells 1, protein (NM23A) expressed in ...
NME3                  0.667   nucleoside diphosphate kinase 3 
NME4                  0.556   nucleoside diphosphate kinase 4 
NME5                  0.163   non-metastatic cells 5, protein expressed in (nucleos...
NME6                  0.160   nucleoside diphosphate kinase type 6 
NME7                  0.156   nucleoside diphosphate kinase 7 isoform b 
NME7                  0.156   nucleoside diphosphate kinase 7 isoform a 
TXNDC3                0.125   thioredoxin domain containing 3 
TXNDC6                0.118   thioredoxin domain containing 6 
ABCA1                 0.014   ATP-binding cassette, sub-family A member 1 
DYRK1B                0.010   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.010   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.010   dual-specificity tyrosine-(Y)-phosphorylation regulat...
POLA1                 0.010   DNA-directed DNA polymerase alpha 1 
RP2                   0.010   XRP2 protein 
DYRK4                 0.007   dual-specificity tyrosine-(Y)-phosphorylation regula...
SMURF1                0.007   Smad ubiquitination regulatory factor 1 isoform 1 [H...
SMURF1                0.007   Smad ubiquitination regulatory factor 1 isoform 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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