RP2 9412

Name: RP2	Sequence: fasta or formatted (350aa)		NCBI GI: 170016081
Description: XRP2 protein		Referenced in: Crystallins and Other Eye Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 20 1 C cysteine 4.3 15 2 D aspartate 6.9 24 2 E glutamate 7.4 26 3 F phenylalanine 7.4 26 2 G glycine 5.7 20 1 H histidine 0.6 2 1 I isoleucine 6.0 21 2 K lysine 6.3 22 1 L leucine 6.3 22 2 M methionine 1.7 6 1 N asparagine 4.9 17 2 P proline 4.3 15 1 Q glutamine 4.9 17 2 R arginine 5.1 18 2 S serine 6.9 24 3 T threonine 4.6 16 2 V valine 7.7 27 2 W tryptophan 1.1 4 1 Y tyrosine 2.3 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 XRP2 protein TBCC 0.114 beta-tubulin cofactor C TBCCD1 0.053 TBCC domain containing 1 TBCCD1 0.053 TBCC domain containing 1 UBAP2L 0.012 ubiquitin associated protein 2-like isoform a [Homo... UBAP2L 0.012 ubiquitin associated protein 2-like isoform b [Homo... BRAF 0.010 B-Raf UPF3A 0.010 UPF3 regulator of nonsense transcripts homolog A iso... UPF3A 0.010 UPF3 regulator of nonsense transcripts homolog A iso... DIS3L 0.007 DIS3 mitotic control homolog (S. cerevisiae)-like i... NARG1L 0.007 NMDA receptor regulated 1-like protein isoform 1 [Ho... ITGA10 0.007 integrin, alpha 10 precursor CASK 0.006 calcium/calmodulin-dependent serine protein kinase ... CASK 0.006 calcium/calmodulin-dependent serine protein kinase ... CASK 0.006 calcium/calmodulin-dependent serine protein kinase ... NSD1 0.006 nuclear receptor binding SET domain protein 1 isofor... NSD1 0.006 nuclear receptor binding SET domain protein 1 isofor... TMEM132C 0.006 transmembrane protein 132C MAP7D2 0.006 MAP7 domain containing 2 RNF168 0.006 ring finger protein 168 WDR19 0.004 WD repeat domain 19 C1orf14 0.004 chromosome 1 open reading frame 14 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.