Guide to the Human Genome
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Name: NME1 Sequence: fasta or formatted (177aa) NCBI GI: 38045913
Description:

non-metastatic cells 1, protein (NM23A) expressed in isoform a

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt prot [152aa] non-metastatic cells 1, protein (NM23A) expressed in isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          8           1
 C cysteine            2.3          4           1
 D aspartate           5.1          9           1
 E glutamate           7.9         14           2
 F phenylalanine       5.1          9           2
 G glycine            10.7         19           1
 H histidine           2.3          4           1
 I isoleucine          6.8         12           2
 K lysine              5.6         10           1
 L leucine             7.9         14           2
 M methionine          3.4          6           1
 N asparagine          2.8          5           1
 P proline             4.5          8           2
 Q glutamine           3.4          6           1
 R arginine            4.5          8           1
 S serine              5.6         10           2
 T threonine           4.5          8           1
 V valine              9.0         16           2
 W tryptophan          1.7          3           1
 Y tyrosine            2.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   non-metastatic cells 1, protein (NM23A) expressed in... 
NME1                  0.853   non-metastatic cells 1, protein (NM23A) expressed in ...
NME1-NME2             0.759   NME1-NME2 protein 
NME2                  0.753   nucleoside diphosphate kinase B 
NME2                  0.753   nucleoside diphosphate kinase B 
NME2                  0.753   nucleoside diphosphate kinase B 
NME2                  0.753   nucleoside diphosphate kinase B 
NME3                  0.579   nucleoside diphosphate kinase 3 
NME4                  0.476   nucleoside diphosphate kinase 4 
NME7                  0.135   nucleoside diphosphate kinase 7 isoform b 
NME7                  0.135   nucleoside diphosphate kinase 7 isoform a 
NME6                  0.115   nucleoside diphosphate kinase type 6 
NME5                  0.112   non-metastatic cells 5, protein expressed in (nucleos...
TXNDC6                0.097   thioredoxin domain containing 6 
TXNDC3                0.097   thioredoxin domain containing 3 
ABCA1                 0.015   ATP-binding cassette, sub-family A member 1 
ACLY                  0.009   ATP citrate lyase isoform 2 
ACLY                  0.009   ATP citrate lyase isoform 1 
ABCA12                0.009   ATP-binding cassette, sub-family A, member 12 isofor...
ABCA12                0.009   ATP-binding cassette, sub-family A, member 12 isofor...
ZNF716                0.009   PREDICTED: zinc finger protein 716 
ACRV1                 0.006   acrosomal vesicle protein 1 isoform c precursor [Homo...
ACRV1                 0.006   acrosomal vesicle protein 1 isoform a precursor [Homo...
ACRV1                 0.006   acrosomal vesicle protein 1 isoform f precursor [Homo...
ACRV1                 0.006   acrosomal vesicle protein 1 isoform d precursor [Homo...
FRMPD2                0.006   FERM and PDZ domain containing 2 isoform 1 
ASB6                  0.006   ankyrin repeat and SOCS box-containing 6 isoform 1 [H...
FRMPD2                0.006   FERM and PDZ domain containing 2 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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