Guide to the Human Genome
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Name: HES2 Sequence: fasta or formatted (173aa) NCBI GI: 63055047
Description:

hairy and enhancer of split homolog 2

Referenced in:

Notch Pathway
Helix-Loop-Helix Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.5         25           2
 C cysteine            2.9          5           1
 D aspartate           2.9          5           1
 E glutamate           5.8         10           1
 F phenylalanine       0.6          1           1
 G glycine             6.4         11           2
 H histidine           0.6          1           1
 I isoleucine          1.2          2           1
 K lysine              3.5          6           1
 L leucine            13.9         24           2
 M methionine          1.2          2           1
 N asparagine          1.7          3           1
 P proline            13.3         23           2
 Q glutamine           1.7          3           1
 R arginine           10.4         18           3
 S serine             10.4         18           2
 T threonine           1.7          3           1
 V valine              4.0          7           1
 W tryptophan          2.3          4           1
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hairy and enhancer of split homolog 2 
HES4                  0.290   hairy and enhancer of split 4 isoform 2 
HES1                  0.271   hairy and enhancer of split 1 
HES4                  0.265   hairy and enhancer of split 4 isoform 1 
HES5                  0.165   hairy and enhancer of split 5 
HES6                  0.159   hairy and enhancer of split 6 isoform b 
HES6                  0.155   hairy and enhancer of split 6 isoform a 
HES7                  0.149   hairy and enhancer of split 7 
HES3                  0.125   hairy and enhancer of split 3 
HEY1                  0.113   hairy/enhancer-of-split related with YRPW motif 1 i...
HEY2                  0.110   hairy/enhancer-of-split related with YRPW motif 2 [Ho...
HEY1                  0.107   hairy/enhancer-of-split related with YRPW motif 1 i...
HEYL                  0.107   hairy/enhancer-of-split related with YRPW motif-like ...
BHLHE40               0.085   basic helix-loop-helix family, member e40 
HCN2                  0.058   hyperpolarization activated cyclic nucleotide-gated...
HELT                  0.055   HES/HEY-like transcription factor 
CDX1                  0.052   caudal type homeobox 1 
MAP7                  0.052   microtubule-associated protein 7 
MXRA7                 0.052   transmembrane anchor protein 1 isoform 3 
MXRA7                 0.052   transmembrane anchor protein 1 isoform 2 
MXRA7                 0.052   transmembrane anchor protein 1 isoform 1 
BHLHE41               0.049   basic helix-loop-helix domain containing, class B, 3...
ZNF828                0.046   zinc finger protein 828 
SEC24B                0.046   SEC24 (S. cerevisiae) homolog B isoform b 
SEC24B                0.046   SEC24 (S. cerevisiae) homolog B isoform a 
TRIM33                0.046   tripartite motif-containing 33 protein isoform beta ...
TRIM33                0.046   tripartite motif-containing 33 protein isoform alpha...
TRRAP                 0.046   transformation/transcription domain-associated protei...
LBXCOR1               0.046   LBXCOR1 homolog 
TRIM47                0.043   tripartite motif-containing 47 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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