Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: HES4 Sequence: fasta or formatted (247aa) NCBI GI: 216548627
Description:

hairy and enhancer of split 4 isoform 1

Referenced in:

Notch Pathway
Helix-Loop-Helix Transcription Factors

Other entries for this name:
alt prot [221aa] hairy and enhancer of split 4 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.6         36           2
 C cysteine            1.2          3           1
 D aspartate           2.8          7           1
 E glutamate           4.9         12           1
 F phenylalanine       1.2          3           1
 G glycine             9.3         23           2
 H histidine           2.0          5           1
 I isoleucine          1.2          3           1
 K lysine              4.0         10           1
 L leucine            11.7         29           2
 M methionine          1.6          4           1
 N asparagine          0.8          2           1
 P proline            13.0         32           2
 Q glutamine           2.4          6           1
 R arginine           11.7         29           3
 S serine              7.7         19           2
 T threonine           3.2          8           1
 V valine              4.9         12           1
 W tryptophan          0.8          2           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hairy and enhancer of split 4 isoform 1 
HES4                  0.856   hairy and enhancer of split 4 isoform 2 
HES1                  0.418   hairy and enhancer of split 1 
HES2                  0.185   hairy and enhancer of split homolog 2 
HES7                  0.151   hairy and enhancer of split 7 
HEYL                  0.142   hairy/enhancer-of-split related with YRPW motif-like ...
HES6                  0.136   hairy and enhancer of split 6 isoform b 
HES6                  0.136   hairy and enhancer of split 6 isoform a 
HEY1                  0.132   hairy/enhancer-of-split related with YRPW motif 1 i...
HEY1                  0.127   hairy/enhancer-of-split related with YRPW motif 1 i...
HEY2                  0.125   hairy/enhancer-of-split related with YRPW motif 2 [Ho...
HES3                  0.115   hairy and enhancer of split 3 
HES5                  0.113   hairy and enhancer of split 5 
BHLHE41               0.081   basic helix-loop-helix domain containing, class B, 3...
BHLHE40               0.076   basic helix-loop-helix family, member e40 
HELT                  0.051   HES/HEY-like transcription factor 
INSM2                 0.036   insulinoma-associated protein IA-6 
BEST2                 0.032   vitelliform macular dystrophy 2-like 1 
C15orf39              0.032   hypothetical protein LOC56905 
GMIP                  0.032   GEM interacting protein 
MNT                   0.030   MAX binding protein 
SOX18                 0.030   SRY-box 18 
PRPF40B               0.030   Huntingtin interacting protein C isoform 2 
PRPF40B               0.030   Huntingtin interacting protein C isoform 1 
SMARCA4               0.028   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.028   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.028   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.028   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.028   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.028   SWI/SNF-related matrix-associated actin-dependent r...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press