Guide to the Human Genome
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Name: PSG5 Sequence: fasta or formatted (335aa) NCBI GI: 194097369
Description:

pregnancy specific beta-1-glycoprotein 5

Referenced in:

Ovary, Uterus and Placenta

Other entries for this name:
alt mRNA [335aa] pregnancy specific beta-1-glycoprotein 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         13           1
 C cysteine            1.5          5           1
 D aspartate           3.0         10           1
 E glutamate           4.8         16           1
 F phenylalanine       2.4          8           1
 G glycine             7.2         24           2
 H histidine           1.5          5           1
 I isoleucine          6.9         23           2
 K lysine              4.8         16           1
 L leucine            10.7         36           3
 M methionine          1.2          4           1
 N asparagine          6.3         21           2
 P proline             8.1         27           2
 Q glutamine           3.3         11           2
 R arginine            5.1         17           1
 S serine              8.1         27           2
 T threonine           7.8         26           2
 V valine              5.4         18           2
 W tryptophan          1.8          6           2
 Y tyrosine            6.6         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy specific beta-1-glycoprotein 5 
PSG5                  1.000   pregnancy specific beta-1-glycoprotein 5 
PSG2                  0.746   pregnancy specific beta-1-glycoprotein 2 
PSG11                 0.714   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG4                  0.707   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
CEACAM8               0.529   carcinoembryonic antigen-related cell adhesion molec...
PSG7                  0.523   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG8                  0.522   pregnancy specific beta-1-glycoprotein 8 isoform c ...
PSG3                  0.522   pregnancy specific beta-1-glycoprotein 3 
CEACAM6               0.516   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.513   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.513   carcinoembryonic antigen-related cell adhesion molec...
PSG8                  0.511   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.511   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG1                  0.510   pregnancy specific beta-1-glycoprotein 1 
PSG6                  0.502   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.502   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG9                  0.498   pregnancy specific beta-1-glycoprotein 9 
PSG4                  0.496   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
CEACAM5               0.484   carcinoembryonic antigen-related cell adhesion molec...
CEACAM7               0.338   carcinoembryonic antigen-related cell adhesion molecu...
PSG11                 0.315   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.315   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM16              0.212   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.208   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.205   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.202   carcinoembryonic antigen-related cell adhesion mole...
CEACAM4               0.175   carcinoembryonic antigen-related cell adhesion molec...
CEACAM20              0.127   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.127   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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