Guide to the Human Genome
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Name: PSG9 Sequence: fasta or formatted (426aa) NCBI GI: 156616284
Description:

pregnancy specific beta-1-glycoprotein 9

Referenced in:

Ovary, Uterus and Placenta

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         16           1
 C cysteine            1.9          8           1
 D aspartate           3.1         13           1
 E glutamate           5.9         25           2
 F phenylalanine       2.6         11           1
 G glycine             6.1         26           2
 H histidine           1.9          8           1
 I isoleucine          7.0         30           3
 K lysine              4.5         19           1
 L leucine            10.6         45           3
 M methionine          1.2          5           1
 N asparagine          6.3         27           2
 P proline             8.5         36           2
 Q glutamine           3.1         13           2
 R arginine            5.2         22           1
 S serine              8.0         34           3
 T threonine           7.7         33           2
 V valine              4.9         21           1
 W tryptophan          1.9          8           2
 Y tyrosine            6.1         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy specific beta-1-glycoprotein 9 
PSG6                  0.868   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG6                  0.846   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG3                  0.843   pregnancy specific beta-1-glycoprotein 3 
PSG8                  0.830   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG8                  0.828   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG7                  0.826   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG4                  0.825   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG1                  0.808   pregnancy specific beta-1-glycoprotein 1 
PSG8                  0.542   pregnancy specific beta-1-glycoprotein 8 isoform c ...
PSG4                  0.476   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG11                 0.466   pregnancy specific beta-1-glycoprotein 11 isoform 1...
PSG2                  0.463   pregnancy specific beta-1-glycoprotein 2 
PSG5                  0.387   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.387   pregnancy specific beta-1-glycoprotein 5 
CEACAM8               0.312   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.311   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.311   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.310   carcinoembryonic antigen-related cell adhesion molec...
CEACAM5               0.305   carcinoembryonic antigen-related cell adhesion molec...
CEACAM7               0.249   carcinoembryonic antigen-related cell adhesion molecu...
PSG11                 0.229   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.229   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM21              0.170   carcinoembryonic antigen-related cell adhesion molec...
CEACAM21              0.170   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.157   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.150   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.150   carcinoembryonic antigen-related cell adhesion mole...
CEACAM16              0.127   carcinoembryonic antigen-related cell adhesion molec...
CEACAM4               0.123   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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