Guide to the Human Genome
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Name: PSG8 Sequence: fasta or formatted (297aa) NCBI GI: 194328712
Description:

pregnancy specific beta-1-glycoprotein 8 isoform c

Referenced in:

Ovary, Uterus and Placenta

Other entries for this name:
alt prot [419aa] pregnancy specific beta-1-glycoprotein 8 isoform b
alt prot [426aa] pregnancy specific beta-1-glycoprotein 8 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         10           1
 C cysteine            2.4          7           1
 D aspartate           2.7          8           1
 E glutamate           5.1         15           1
 F phenylalanine       2.0          6           1
 G glycine             5.1         15           2
 H histidine           0.7          2           1
 I isoleucine          5.1         15           1
 K lysine              5.4         16           1
 L leucine            11.1         33           3
 M methionine          1.7          5           1
 N asparagine          5.7         17           2
 P proline             9.8         29           2
 Q glutamine           3.4         10           1
 R arginine            5.4         16           1
 S serine             10.8         32           3
 T threonine           8.1         24           2
 V valine              4.7         14           1
 W tryptophan          2.4          7           2
 Y tyrosine            5.4         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy specific beta-1-glycoprotein 8 isoform c ... 
PSG8                  0.926   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.907   pregnancy specific beta-1-glycoprotein 8 isoform a [...
PSG1                  0.852   pregnancy specific beta-1-glycoprotein 1 
PSG7                  0.845   pregnancy specific beta-1-glycoprotein 7 precursor ...
PSG3                  0.838   pregnancy specific beta-1-glycoprotein 3 
PSG4                  0.830   pregnancy specific beta-1-glycoprotein 4 isoform 1 [...
PSG6                  0.806   pregnancy specific beta-1-glycoprotein 6 isoform a [H...
PSG6                  0.803   pregnancy specific beta-1-glycoprotein 6 isoform b [...
PSG9                  0.788   pregnancy specific beta-1-glycoprotein 9 
PSG5                  0.589   pregnancy specific beta-1-glycoprotein 5 
PSG5                  0.589   pregnancy specific beta-1-glycoprotein 5 
PSG4                  0.455   pregnancy specific beta-1-glycoprotein 4 isoform 2 [...
PSG2                  0.418   pregnancy specific beta-1-glycoprotein 2 
PSG11                 0.398   pregnancy specific beta-1-glycoprotein 11 isoform 1...
CEACAM8               0.369   carcinoembryonic antigen-related cell adhesion molec...
CEACAM6               0.347   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.346   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.346   carcinoembryonic antigen-related cell adhesion molec...
PSG11                 0.344   pregnancy specific beta-1-glycoprotein 11 isoform 2...
PSG11                 0.344   pregnancy specific beta-1-glycoprotein 11 isoform 2...
CEACAM5               0.339   carcinoembryonic antigen-related cell adhesion molec...
CEACAM7               0.169   carcinoembryonic antigen-related cell adhesion molecu...
CEACAM20              0.165   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.165   carcinoembryonic antigen-related cell adhesion mole...
CEACAM16              0.113   carcinoembryonic antigen-related cell adhesion molec...
CEACAM20              0.111   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.111   carcinoembryonic antigen-related cell adhesion mole...
LOC147645             0.083   PREDICTED: hypothetical protein 
LOC147645             0.083   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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