Guide to the Human Genome
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Name: ARHGEF10L Sequence: fasta or formatted (1279aa) NCBI GI: 58761492
Description:

Rho guanine nucleotide exchange factor (GEF) 10-like isoform 1

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [1240aa] Rho guanine nucleotide exchange factor (GEF) 10-like isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         96           3
 C cysteine            2.2         28           2
 D aspartate           5.8         74           2
 E glutamate           6.9         88           3
 F phenylalanine       2.7         35           2
 G glycine             6.9         88           3
 H histidine           2.4         31           1
 I isoleucine          4.0         51           2
 K lysine              4.8         61           2
 L leucine            11.7        150           3
 M methionine          2.1         27           1
 N asparagine          2.1         27           2
 P proline             7.5         96           3
 Q glutamine           4.8         62           2
 R arginine            5.6         72           2
 S serine              8.5        109           3
 T threonine           4.5         58           2
 V valine              6.9         88           2
 W tryptophan          1.3         16           1
 Y tyrosine            1.7         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho guanine nucleotide exchange factor (GEF) 10-like... 
ARHGEF10L             0.962   Rho guanine nucleotide exchange factor (GEF) 10-like...
ARHGEF10              0.358   Rho guanine nucleotide exchange factor 10 
ARHGEF17              0.054   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
MAPK8IP3              0.034   mitogen-activated protein kinase 8 interacting prote...
MAPK8IP3              0.034   mitogen-activated protein kinase 8 interacting prote...
BCR                   0.031   breakpoint cluster region isoform 2 
BCR                   0.031   breakpoint cluster region isoform 1 
ECT2                  0.031   epithelial cell transforming sequence 2 oncogene pro...
SPAG9                 0.031   sperm associated antigen 9 isoform 1 
SPAG9                 0.031   sperm associated antigen 9 isoform 3 
ABR                   0.027   active breakpoint cluster region-related  protein i...
ABR                   0.027   active breakpoint cluster region-related  protein is...
PREX1                 0.026   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
ABR                   0.026   active breakpoint cluster region-related  protein is...
FGD3                  0.024   FYVE, RhoGEF and PH domain containing 3 
FGD3                  0.024   FYVE, RhoGEF and PH domain containing 3 
ITSN1                 0.024   intersectin 1 isoform ITSN-l 
ECT2L                 0.023   epithelial cell transforming sequence 2 oncogene-li...
FGD4                  0.023   FYVE, RhoGEF and PH domain containing 4 
PLEKHG2               0.023   common-site lymphoma/leukemia guanine nucleotide ex...
FGD2                  0.021   FYVE, RhoGEF and PH domain containing 2 
FGD1                  0.021   faciogenital dysplasia protein 
FGD6                  0.021   FYVE, RhoGEF and PH domain containing 6 
ARHGEF4               0.020   Rho guanine nucleotide exchange factor 4 isoform a [...
ARHGEF4               0.020   Rho guanine nucleotide exchange factor 4 isoform b [...
RASGRF1               0.019   Ras protein-specific guanine nucleotide-releasing f...
RASGRF1               0.019   Ras protein-specific guanine nucleotide-releasing fa...
PLEKHG1               0.019   pleckstrin homology domain containing, family G (wit...
ITSN2                 0.018   intersectin 2 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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