Guide to the Human Genome
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Name: BCR Sequence: fasta or formatted (1227aa) NCBI GI: 82546845
Description:

breakpoint cluster region isoform 2

Referenced in:

Rho and Rac
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [1271aa] breakpoint cluster region isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         85           3
 C cysteine            1.3         16           2
 D aspartate           5.5         67           2
 E glutamate           8.1         99           2
 F phenylalanine       3.8         47           2
 G glycine             5.9         72           3
 H histidine           2.0         24           2
 I isoleucine          3.3         41           1
 K lysine              6.2         76           3
 L leucine             9.2        113           4
 M methionine          2.3         28           2
 N asparagine          3.3         41           2
 P proline             6.5         80           3
 Q glutamine           5.1         62           2
 R arginine            7.1         87           2
 S serine              9.9        121           3
 T threonine           4.2         52           2
 V valine              5.9         72           3
 W tryptophan          1.0         12           1
 Y tyrosine            2.6         32           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   breakpoint cluster region isoform 2 
BCR                   0.991   breakpoint cluster region isoform 1 
ABR                   0.420   active breakpoint cluster region-related  protein is...
ABR                   0.419   active breakpoint cluster region-related  protein i...
ABR                   0.410   active breakpoint cluster region-related  protein is...
LOC100289600          0.061   PREDICTED: hypothetical protein XP_002343826 
LOC100292941          0.059   PREDICTED: hypothetical protein 
LOC100290826          0.059   PREDICTED: hypothetical protein XP_002348160 
LOC100287161          0.059   PREDICTED: hypothetical protein XP_002343833 
ARHGAP27              0.047   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.047   Rho GTPase activating protein 27 isoform a 
ARHGEF17              0.045   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
CHN1                  0.043   chimerin (chimaerin) 1 isoform a 
CHN1                  0.043   chimerin (chimaerin) 1 isoform b 
ARHGAP15              0.041   ARHGAP15 
SYDE2                 0.039   synapse defective 1, Rho GTPase, homolog 2 
ARHGAP12              0.039   Rho GTPase activating protein 12 
ARHGAP21              0.038   Rho GTPase activating protein 21 
SYDE1                 0.038   synapse defective 1, Rho GTPase, homolog 1 
CHN2                  0.038   beta chimerin isoform 2 
CHN2                  0.038   beta chimerin isoform 1 
ARHGAP23              0.036   Rho GTPase activating protein 23 
ARHGEF10              0.035   Rho guanine nucleotide exchange factor 10 
ARHGAP9               0.035   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.035   Rho GTPase activating protein 9 isoform 3 
HMHA1                 0.034   minor histocompatibility antigen HA-1 
RALBP1                0.034   ralA binding protein 1 
ARHGEF10L             0.033   Rho guanine nucleotide exchange factor (GEF) 10-like...
ARHGEF10L             0.033   Rho guanine nucleotide exchange factor (GEF) 10-like...
GRLF1                 0.032   glucocorticoid receptor DNA binding factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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