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Search of human proteins with 5803117
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5803117 paired box 8 isoform PAX8A [Homo sapiens]
(450 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5803117 paired box 8 isoform PAX8A [Homo sapiens] 918 0.0
gi|7524361 paired box 8 isoform PAX8B [Homo sapiens] 689 0.0
gi|7524363 paired box 8 isoform PAX8C [Homo sapiens] 616 e-176
gi|7524365 paired box 8 isoform PAX8D [Homo sapiens] 533 e-151
gi|7669542 paired box 8 isoform PAX8E [Homo sapiens] 532 e-151
gi|34878701 paired box protein 2 isoform b [Homo sapiens] 440 e-123
gi|34878699 paired box protein 2 isoform a [Homo sapiens] 430 e-120
gi|34878716 paired box protein 2 isoform d [Homo sapiens] 420 e-117
gi|34878703 paired box protein 2 isoform e [Homo sapiens] 410 e-114
gi|9951920 paired box 5 [Homo sapiens] 390 e-108
gi|34878709 paired box protein 2 isoform c [Homo sapiens] 379 e-105
gi|189083681 paired box gene 6 isoform a [Homo sapiens] 227 2e-59
gi|4505615 paired box gene 6 isoform a [Homo sapiens] 227 2e-59
gi|4580424 paired box gene 6 isoform b [Homo sapiens] 217 2e-56
gi|188219638 paired box 3 isoform PAX3i [Homo sapiens] 214 2e-55
gi|31563344 paired box 3 isoform PAX3e [Homo sapiens] 209 4e-54
gi|31563342 paired box 3 isoform PAX3d [Homo sapiens] 209 4e-54
gi|31563340 paired box 3 isoform PAX3 [Homo sapiens] 209 4e-54
gi|31563348 paired box 3 isoform PAX3g [Homo sapiens] 207 1e-53
gi|31563346 paired box 3 isoform PAX3h [Homo sapiens] 207 1e-53
gi|7524359 paired box 7 isoform 2 [Homo sapiens] 205 6e-53
gi|4505619 paired box 7 isoform 1 [Homo sapiens] 200 2e-51
gi|207029223 paired box 7 isoform 3 [Homo sapiens] 200 2e-51
gi|197276661 paired box 1 [Homo sapiens] 194 1e-49
gi|7242167 paired box 9 [Homo sapiens] 194 1e-49
gi|7524356 paired box 3 isoform PAX3b [Homo sapiens] 191 2e-48
gi|6654638 paired box 3 isoform PAX3a [Homo sapiens] 191 2e-48
gi|170784824 paired box 4 [Homo sapiens] 164 2e-40
gi|226423889 myocardin isoform 1 [Homo sapiens] 44 2e-04
gi|226423891 myocardin isoform 3 [Homo sapiens] 44 2e-04
>gi|5803117 paired box 8 isoform PAX8A [Homo sapiens]
Length = 450
Score = 918 bits (2372), Expect = 0.0
Identities = 450/450 (100%), Positives = 450/450 (100%)
Query: 1 MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK 60
MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK
Sbjct: 1 MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK 60
Query: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND
Sbjct: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
Query: 121 TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY 180
TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY
Sbjct: 121 TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY 180
Query: 181 SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF 240
SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF
Sbjct: 181 SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF 240
Query: 241 ERQHYPEAYASPSHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVVAD 300
ERQHYPEAYASPSHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVVAD
Sbjct: 241 ERQHYPEAYASPSHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVVAD 300
Query: 301 PHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQAL 360
PHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQAL
Sbjct: 301 PHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQAL 360
Query: 361 LSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRFP 420
LSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRFP
Sbjct: 361 LSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRFP 420
Query: 421 NSSLLSSPYYYSSTSRPSAPPTTATAFDHL 450
NSSLLSSPYYYSSTSRPSAPPTTATAFDHL
Sbjct: 421 NSSLLSSPYYYSSTSRPSAPPTTATAFDHL 450
>gi|7524361 paired box 8 isoform PAX8B [Homo sapiens]
Length = 387
Score = 689 bits (1779), Expect = 0.0
Identities = 359/451 (79%), Positives = 365/451 (80%), Gaps = 65/451 (14%)
Query: 1 MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK 60
MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK
Sbjct: 1 MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK 60
Query: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND
Sbjct: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
Query: 121 TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY 180
TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY
Sbjct: 121 TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY 180
Query: 181 SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF 240
SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF
Sbjct: 181 SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF 240
Query: 241 ERQHYPEAYASPSHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVVAD 300
ERQHYPEAYASPSHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVVA
Sbjct: 241 ERQHYPEAYASPSHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVVA- 299
Query: 301 PHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAFPH-AASVYGQFTGQA 359
+ VG +P + PH S G + A
Sbjct: 300 ------------------------------GREMVGPTLPGYP--PHIPTSGQGSYASSA 327
Query: 360 LLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRF 419
+ G A S +G NAYGHTPYSSYSEAWRF
Sbjct: 328 I----------------------AGMVAGSEYSG---------NAYGHTPYSSYSEAWRF 356
Query: 420 PNSSLLSSPYYYSSTSRPSAPPTTATAFDHL 450
PNSSLLSSPYYYSSTSRPSAPPTTATAFDHL
Sbjct: 357 PNSSLLSSPYYYSSTSRPSAPPTTATAFDHL 387
>gi|7524363 paired box 8 isoform PAX8C [Homo sapiens]
Length = 398
Score = 616 bits (1588), Expect = e-176
Identities = 309/329 (93%), Positives = 309/329 (93%), Gaps = 10/329 (3%)
Query: 1 MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK 60
MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK
Sbjct: 1 MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK 60
Query: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND
Sbjct: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
Query: 121 TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY 180
TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY
Sbjct: 121 TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY 180
Query: 181 SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF 240
SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF
Sbjct: 181 SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF 240
Query: 241 ERQHYPEAYASPSHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVVAD 300
ERQHYPEAYASPSHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVVA
Sbjct: 241 ERQHYPEAYASPSHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVVAA 300
Query: 301 PHSPFAIKQETPEVSSSSSTPSSLSSSAF 329
P PF I S S P S S F
Sbjct: 301 P--PFWI--------CSKSAPGSRPSMPF 319
>gi|7524365 paired box 8 isoform PAX8D [Homo sapiens]
Length = 321
Score = 533 bits (1374), Expect = e-151
Identities = 260/260 (100%), Positives = 260/260 (100%)
Query: 1 MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK 60
MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK
Sbjct: 1 MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK 60
Query: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND
Sbjct: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
Query: 121 TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY 180
TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY
Sbjct: 121 TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY 180
Query: 181 SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF 240
SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF
Sbjct: 181 SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF 240
Query: 241 ERQHYPEAYASPSHTKGEQG 260
ERQHYPEAYASPSHTKGEQG
Sbjct: 241 ERQHYPEAYASPSHTKGEQG 260
>gi|7669542 paired box 8 isoform PAX8E [Homo sapiens]
Length = 287
Score = 532 bits (1370), Expect = e-151
Identities = 261/270 (96%), Positives = 264/270 (97%)
Query: 1 MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK 60
MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK
Sbjct: 1 MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK 60
Query: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND
Sbjct: 61 ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND 120
Query: 121 TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY 180
TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY
Sbjct: 121 TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY 180
Query: 181 SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF 240
SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF
Sbjct: 181 SINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPF 240
Query: 241 ERQHYPEAYASPSHTKGEQGLYPLPLLNST 270
ERQHYPEAYASPSHTKGEQ + L + +T
Sbjct: 241 ERQHYPEAYASPSHTKGEQEVNTLAMPMAT 270
>gi|34878701 paired box protein 2 isoform b [Homo sapiens]
Length = 393
Score = 440 bits (1132), Expect = e-123
Identities = 245/449 (54%), Positives = 291/449 (64%), Gaps = 68/449 (15%)
Query: 2 PHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKI 61
P +++ GHGG+NQLGG FVNGRPLP+VVRQRIV+LAHQGVRPCDISRQLRVSHGCVSKI
Sbjct: 9 PFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKI 68
Query: 62 LGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDT 121
LGRYYETGSI+PGVIGGSKPKVATPKVV+KI +YKRQNPTMFAWEIRDRLLAEG+CDNDT
Sbjct: 69 LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDT 128
Query: 122 VPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYS 181
VPSVSSINRIIRTKVQQPF+ P T +PGHT++PS+A P S +D +GS YS
Sbjct: 129 VPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGS-YS 186
Query: 182 INGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFE 241
ING+LGI + +KRK D+ + + DSQS RKHLR D F+Q LE L+ FE
Sbjct: 187 INGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFE 246
Query: 242 RQHYPEAYASPSHTKGEQG-LYPLPLLNSTLDDGKATLTPSNTP-LGRNLSTHQTYPVVA 299
R YP+ + + H K EQG Y LP L LD+ K++L+ S P LG N+S QTYPVV
Sbjct: 247 RPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVV- 305
Query: 300 DPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQA 359
T +S++ P G PP
Sbjct: 306 -----------TGRDMASTTLP----------------GYPPH----------------- 321
Query: 360 LLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRF 419
PP +GQGSY +S +AGMV GSE+SGN Y H Y++Y+EAWRF
Sbjct: 322 --------------VPP----TGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEAWRF 363
Query: 420 PNSSLLSSPYYYSSTSRPSAPPTTATAFD 448
N +LLSSPYYYS+ R SAP A A+D
Sbjct: 364 SNPALLSSPYYYSAAPR-SAPAAAAAAYD 391
>gi|34878699 paired box protein 2 isoform a [Homo sapiens]
Length = 416
Score = 430 bits (1105), Expect = e-120
Identities = 247/472 (52%), Positives = 294/472 (62%), Gaps = 91/472 (19%)
Query: 2 PHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKI 61
P +++ GHGG+NQLGG FVNGRPLP+VVRQRIV+LAHQGVRPCDISRQLRVSHGCVSKI
Sbjct: 9 PFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKI 68
Query: 62 LGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDT 121
LGRYYETGSI+PGVIGGSKPKVATPKVV+KI +YKRQNPTMFAWEIRDRLLAEG+CDNDT
Sbjct: 69 LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDT 128
Query: 122 VPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYS 181
VPSVSSINRIIRTKVQQPF+ P T +PGHT++PS+A P S +D +GS YS
Sbjct: 129 VPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGS-YS 186
Query: 182 INGLLGIAQPGSDKRKMDDSD--------------------QDSCRLSI---DSQSSSSG 218
ING+LGI + +KRK D+ + +D S+ DSQS
Sbjct: 187 INGILGIPRSNGEKRKRDEVEVYTDPAHIRGGGGLHLVWTLRDVSEGSVPNGDSQSGVDS 246
Query: 219 PRKHLRTDAFSQHHLEPLECPFERQHYPEAYASPSHTKGEQG-LYPLPLLNSTLDDGKAT 277
RKHLR D F+Q LE L+ FER YP+ + + H K EQG Y LP L LD+ K++
Sbjct: 247 LRKHLRADTFTQQQLEALDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSS 306
Query: 278 LTPSNTP-LGRNLSTHQTYPVVADPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVG 336
L+ S P LG N+S QTYPVV T +S++ P
Sbjct: 307 LSASTNPELGSNVSGTQTYPVV------------TGRDMASTTLP--------------- 339
Query: 337 SGVPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVA 396
G PP PP +GQGSY +S +AGMV
Sbjct: 340 -GYPPH-------------------------------VPP----TGQGSYPTSTLAGMVP 363
Query: 397 GSEYSGNAYGHTPYSSYSEAWRFPNSSLLSSPYYYSSTSRPSAPPTTATAFD 448
GSE+SGN Y H Y++Y+EAWRF N +LLSSPYYYS+ R SAP A A+D
Sbjct: 364 GSEFSGNPYSHPQYTAYNEAWRFSNPALLSSPYYYSAAPR-SAPAAAAAAYD 414
>gi|34878716 paired box protein 2 isoform d [Homo sapiens]
Length = 408
Score = 420 bits (1080), Expect = e-117
Identities = 240/454 (52%), Positives = 287/454 (63%), Gaps = 73/454 (16%)
Query: 2 PHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKI 61
P +++ GHGG+NQLGG FVNGRPLP+VVRQRIV+LAHQGVRPCDISRQLRVSHGCVSKI
Sbjct: 9 PFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKI 68
Query: 62 LGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDT 121
LGRYYETGSI+PGVIGGSKPKVATPKVV+KI +YKRQNPTMFAWEIRDRLLAEG+CDNDT
Sbjct: 69 LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDT 128
Query: 122 VPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYS 181
VPSVSSINRIIRTKVQQPF+ P T +PGHT++PS+A P S +D +GS YS
Sbjct: 129 VPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGS-YS 186
Query: 182 INGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFE 241
ING+LGI + +KRK D+ + + DSQS RKHLR D F+Q LE L+ FE
Sbjct: 187 INGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFE 246
Query: 242 RQHYPEAYASPSHTKGEQG-LYPLPLLNSTLDDGKATLTPSNTP-LGRNLSTHQTYPVVA 299
R YP+ + + H K EQG Y LP L LD+ K++L+ S P LG N+S QTYPVV
Sbjct: 247 RPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVV- 305
Query: 300 DPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQA 359
T +S++ P G PP
Sbjct: 306 -----------TGRDMASTTLP----------------GYPPH----------------- 321
Query: 360 LLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRF 419
PP +GQGSY +S +AGMV GSE+SGN Y H Y++Y+EAWRF
Sbjct: 322 --------------VPP----TGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTAYNEAWRF 363
Query: 420 PNSSLLSSPYYYSSTSRPSAP-PTTATAF--DHL 450
N +LL P P P P TAT++ DH+
Sbjct: 364 SNPALLMPP---PGPPLPLLPLPMTATSYRGDHI 394
>gi|34878703 paired box protein 2 isoform e [Homo sapiens]
Length = 431
Score = 410 bits (1053), Expect = e-114
Identities = 242/477 (50%), Positives = 290/477 (60%), Gaps = 96/477 (20%)
Query: 2 PHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKI 61
P +++ GHGG+NQLGG FVNGRPLP+VVRQRIV+LAHQGVRPCDISRQLRVSHGCVSKI
Sbjct: 9 PFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKI 68
Query: 62 LGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDT 121
LGRYYETGSI+PGVIGGSKPKVATPKVV+KI +YKRQNPTMFAWEIRDRLLAEG+CDNDT
Sbjct: 69 LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDT 128
Query: 122 VPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYS 181
VPSVSSINRIIRTKVQQPF+ P T +PGHT++PS+A P S +D +GS YS
Sbjct: 129 VPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGS-YS 186
Query: 182 INGLLGIAQPGSDKRKMDDSD--------------------QDSCRLSI---DSQSSSSG 218
ING+LGI + +KRK D+ + +D S+ DSQS
Sbjct: 187 INGILGIPRSNGEKRKRDEVEVYTDPAHIRGGGGLHLVWTLRDVSEGSVPNGDSQSGVDS 246
Query: 219 PRKHLRTDAFSQHHLEPLECPFERQHYPEAYASPSHTKGEQG-LYPLPLLNSTLDDGKAT 277
RKHLR D F+Q LE L+ FER YP+ + + H K EQG Y LP L LD+ K++
Sbjct: 247 LRKHLRADTFTQQQLEALDRVFERPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSS 306
Query: 278 LTPSNTP-LGRNLSTHQTYPVVADPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVG 336
L+ S P LG N+S QTYPVV T +S++ P
Sbjct: 307 LSASTNPELGSNVSGTQTYPVV------------TGRDMASTTLP--------------- 339
Query: 337 SGVPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVA 396
G PP PP +GQGSY +S +AGMV
Sbjct: 340 -GYPPH-------------------------------VPP----TGQGSYPTSTLAGMVP 363
Query: 397 GSEYSGNAYGHTPYSSYSEAWRFPNSSLLSSPYYYSSTSRPSAP-PTTATAF--DHL 450
GSE+SGN Y H Y++Y+EAWRF N +LL P P P P TAT++ DH+
Sbjct: 364 GSEFSGNPYSHPQYTAYNEAWRFSNPALLMPP---PGPPLPLLPLPMTATSYRGDHI 417
>gi|9951920 paired box 5 [Homo sapiens]
Length = 391
Score = 390 bits (1002), Expect = e-108
Identities = 230/447 (51%), Positives = 276/447 (61%), Gaps = 76/447 (17%)
Query: 7 RSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYY 66
R+GHGG+NQLGG FVNGRPLP+VVRQRIV+LAHQGVRPCDISRQLRVSHGCVSKILGRYY
Sbjct: 14 RTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYY 73
Query: 67 ETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVS 126
ETGSI+PGVIGGSKPKVATPKVVEKI +YKRQNPTMFAWEIRDRLLAE VCDNDTVPSVS
Sbjct: 74 ETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVS 133
Query: 127 SINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGLL 186
SINRIIRTKVQQP N P+ + H+++ + +VT S +DS GS+YSI+G+L
Sbjct: 134 SINRIIRTKVQQPPNQPVP--------ASSHSIVSTGSVTQVSSVSTDSAGSSYSISGIL 185
Query: 187 GIAQPGSD--KRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFERQH 244
GI P +D KRK D+ Q+S + S RK +R D F+Q LE L+ FERQH
Sbjct: 186 GITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRVFERQH 245
Query: 245 YPEAYASPSHTKGEQ--GLYPLPLLNSTLDDGKATL-TPSNTPLGRNLSTHQTYPVVADP 301
Y + + + K EQ + L LDD KA L +P+ +G ++ Q+YP+V
Sbjct: 246 YSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLASPTPADIGSSVPGPQSYPIV--- 302
Query: 302 HSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQALL 361
T L+S+ G PP P A GQ
Sbjct: 303 ------------------TGRDLASTTL-------PGYPPH--VPPA--------GQGSY 327
Query: 362 SGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRFPN 421
S PTL GMV GSE+SG+ Y H YSSY+++WRFPN
Sbjct: 328 S-----APTL--------------------TGMVPGSEFSGSPYSHPQYSSYNDSWRFPN 362
Query: 422 SSLLSSPYYYSSTSRPSAPPTTATAFD 448
LL SPYYYS+ +R +APP ATA+D
Sbjct: 363 PGLLGSPYYYSAAARGAAPPAAATAYD 389
>gi|34878709 paired box protein 2 isoform c [Homo sapiens]
Length = 396
Score = 379 bits (973), Expect = e-105
Identities = 225/447 (50%), Positives = 269/447 (60%), Gaps = 85/447 (19%)
Query: 2 PHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKI 61
P +++ GHGG+NQLGG FVNGRPLP+VVRQRIV+LAHQGVRPCDISRQLRVSHGCVSKI
Sbjct: 9 PFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKI 68
Query: 62 LGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDT 121
LGRYYETGSI+PGVIGGSKPKVATPKVV+KI +YKRQNPTMFAWEIRDRLLAEG+CDNDT
Sbjct: 69 LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDT 128
Query: 122 VPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYS 181
VPSVSSINRIIRTKVQQPF+ P T +PGHT++PS+A P S +D +GS YS
Sbjct: 129 VPSVSSINRIIRTKVQQPFH-PTPDGAGTGVTAPGHTIVPSTASPPVSSASNDPVGS-YS 186
Query: 182 INGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFE 241
ING+LGI + +KRK D+ + + DSQS RKHLR D F+Q LE L+ FE
Sbjct: 187 INGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFE 246
Query: 242 RQHYPEAYASPSHTKGEQG-LYPLPLLNSTLDDGKATLTPSNTP-LGRNLSTHQTYPVVA 299
R YP+ + + H K EQG Y LP L LD+ K++L+ S P LG N+S QTYPVV
Sbjct: 247 RPSYPDVFQASEHIKSEQGNEYSLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVV- 305
Query: 300 DPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQA 359
T +S++ P G PP
Sbjct: 306 -----------TGRDMASTTLP----------------GYPPH----------------- 321
Query: 360 LLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRF 419
PP +GQGSY +S +AGMV EA
Sbjct: 322 --------------VPP----TGQGSYPTSTLAGMV------------------PEAAVG 345
Query: 420 PNSSLLSSPYYYSSTSRPSAPPTTATA 446
P+SSL+S P + P PT A++
Sbjct: 346 PSSSLMSKPGRKLAEVPPCVQPTGASS 372
>gi|189083681 paired box gene 6 isoform a [Homo sapiens]
Length = 422
Score = 227 bits (578), Expect = 2e-59
Identities = 154/411 (37%), Positives = 206/411 (50%), Gaps = 68/411 (16%)
Query: 6 IRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRY 65
+++ H G+NQLGG FVNGRPLP+ RQ+IV+LAH G RPCDISR L+VS+GCVSKILGRY
Sbjct: 1 MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRY 60
Query: 66 YETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSV 125
YETGSIRP IGGSKP+VATP+VV KI YKR+ P++FAWEIRDRLL+EGVC ND +PSV
Sbjct: 61 YETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSV 120
Query: 126 SSINRIIRTKVQQPFNLPMDSCVATKSLSPGHT--------LIPSSAVTPPESPQSDSLG 177
SSINR++R + + D + G T P ++V P P D
Sbjct: 121 SSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSV--PGQPTQDGCQ 178
Query: 178 STYSINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLE 237
G S +DSD+ RL + + + RT +F+Q +E LE
Sbjct: 179 QQEG-----GGENTNSISSNGEDSDEAQMRLQLKRKLQRN------RT-SFTQEQIEALE 226
Query: 238 CPFERQHYPEAYASPSHTKGEQGLYPLPLLNSTL-------------------DDGKATL 278
FER HYP+ +A E+ + L + + +A+
Sbjct: 227 KEFERTHYPDVFAR------ERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 280
Query: 279 TPSNTPLGRNLSTHQTYPVVADPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSG 338
TPS+ P+ + ST Y + P +P SS T S+ L S
Sbjct: 281 TPSHIPISSSFST-SVYQPIPQPTTPV-----------SSFTSGSMLGRTDTALTNTYSA 328
Query: 339 VPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGY---------PPHIPT 380
+PP +F A ++ Q + S + PT P PPH+ T
Sbjct: 329 LPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQT 379
>gi|4505615 paired box gene 6 isoform a [Homo sapiens]
Length = 422
Score = 227 bits (578), Expect = 2e-59
Identities = 154/411 (37%), Positives = 206/411 (50%), Gaps = 68/411 (16%)
Query: 6 IRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRY 65
+++ H G+NQLGG FVNGRPLP+ RQ+IV+LAH G RPCDISR L+VS+GCVSKILGRY
Sbjct: 1 MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRY 60
Query: 66 YETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSV 125
YETGSIRP IGGSKP+VATP+VV KI YKR+ P++FAWEIRDRLL+EGVC ND +PSV
Sbjct: 61 YETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSV 120
Query: 126 SSINRIIRTKVQQPFNLPMDSCVATKSLSPGHT--------LIPSSAVTPPESPQSDSLG 177
SSINR++R + + D + G T P ++V P P D
Sbjct: 121 SSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSV--PGQPTQDGCQ 178
Query: 178 STYSINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLE 237
G S +DSD+ RL + + + RT +F+Q +E LE
Sbjct: 179 QQEG-----GGENTNSISSNGEDSDEAQMRLQLKRKLQRN------RT-SFTQEQIEALE 226
Query: 238 CPFERQHYPEAYASPSHTKGEQGLYPLPLLNSTL-------------------DDGKATL 278
FER HYP+ +A E+ + L + + +A+
Sbjct: 227 KEFERTHYPDVFAR------ERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 280
Query: 279 TPSNTPLGRNLSTHQTYPVVADPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSG 338
TPS+ P+ + ST Y + P +P SS T S+ L S
Sbjct: 281 TPSHIPISSSFST-SVYQPIPQPTTPV-----------SSFTSGSMLGRTDTALTNTYSA 328
Query: 339 VPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGY---------PPHIPT 380
+PP +F A ++ Q + S + PT P PPH+ T
Sbjct: 329 LPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQT 379
>gi|4580424 paired box gene 6 isoform b [Homo sapiens]
Length = 436
Score = 217 bits (553), Expect = 2e-56
Identities = 154/425 (36%), Positives = 206/425 (48%), Gaps = 82/425 (19%)
Query: 6 IRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLR------------- 52
+++ H G+NQLGG FVNGRPLP+ RQ+IV+LAH G RPCDISR L+
Sbjct: 1 MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQ 60
Query: 53 -VSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRL 111
VS+GCVSKILGRYYETGSIRP IGGSKP+VATP+VV KI YKR+ P++FAWEIRDRL
Sbjct: 61 NVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRL 120
Query: 112 LAEGVCDNDTVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHT--------LIPSS 163
L+EGVC ND +PSVSSINR++R + + D + G T P +
Sbjct: 121 LSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGT 180
Query: 164 AVTPPESPQSDSLGSTYSINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHL 223
+V P P D G S +DSD+ RL + + +
Sbjct: 181 SV--PGQPTQDGCQQQEG-----GGENTNSISSNGEDSDEAQMRLQLKRKLQRN------ 227
Query: 224 RTDAFSQHHLEPLECPFERQHYPEAYASPSHTKGEQGLYPLPLLNSTL------------ 271
RT +F+Q +E LE FER HYP+ +A E+ + L + +
Sbjct: 228 RT-SFTQEQIEALEKEFERTHYPDVFAR------ERLAAKIDLPEARIQVWFSNRRAKWR 280
Query: 272 -------DDGKATLTPSNTPLGRNLSTHQTYPVVADPHSPFAIKQETPEVSSSSSTPSSL 324
+A+ TPS+ P+ + ST Y + P +P SS T S+
Sbjct: 281 REEKLRNQRRQASNTPSHIPISSSFST-SVYQPIPQPTTPV-----------SSFTSGSM 328
Query: 325 SSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGY---------P 375
L S +PP +F A ++ Q + S + PT P P
Sbjct: 329 LGRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTP 388
Query: 376 PHIPT 380
PH+ T
Sbjct: 389 PHMQT 393
>gi|188219638 paired box 3 isoform PAX3i [Homo sapiens]
Length = 483
Score = 214 bits (544), Expect = 2e-55
Identities = 154/429 (35%), Positives = 208/429 (48%), Gaps = 75/429 (17%)
Query: 9 GHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYET 68
G G +NQLGG F+NGRPLP +R +IV++AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 69 GSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSI 128
GSIRPG IGGSKPKV TP V +KI +YKR+NP MF+WEIRD+LL + VCD +TVPSVSSI
Sbjct: 94 GSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSI 153
Query: 129 NRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGLLGI 188
+RI+R+K G + + E+ +S+ + +SI+G+L
Sbjct: 154 SRILRSKF-------------------GKGEEEEADLERKEAEESEK-KAKHSIDGIL-- 191
Query: 189 AQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRT-DAFSQHHLEPLECPFERQHYPE 247
S++ SD+ S IDS+ RK R+ F+ LE LE FER HYP+
Sbjct: 192 ----SERASAPQSDEGS---DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPD 244
Query: 248 AYASP---------------------SHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLG 286
Y + + + G L N + G P+ P
Sbjct: 245 IYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGG---FPPTAMP-- 299
Query: 287 RNLSTHQTYPVVADPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAFP 346
T TY + + P +I Q + SS+ P L S V P N P
Sbjct: 300 ----TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPST------VHQSTIPSN--P 347
Query: 347 HAASVYGQFTGQALLSGREMVGPTLPGY-PPHIPTSGQGSYASSAIAGMVAGSEYSGNAY 405
++S Y L S R + PP P++ + ++ V G +
Sbjct: 348 DSSSAY------CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGV 401
Query: 406 GHTPYSSYS 414
H P + Y+
Sbjct: 402 PHQPQTDYA 410
>gi|31563344 paired box 3 isoform PAX3e [Homo sapiens]
Length = 505
Score = 209 bits (532), Expect = 4e-54
Identities = 154/430 (35%), Positives = 208/430 (48%), Gaps = 76/430 (17%)
Query: 9 GHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYET 68
G G +NQLGG F+NGRPLP +R +IV++AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 69 GSIRPGVIGGSKPK-VATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSS 127
GSIRPG IGGSKPK V TP V +KI +YKR+NP MF+WEIRD+LL + VCD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 128 INRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGLLG 187
I+RI+R+K G + + E+ +S+ + +SI+G+L
Sbjct: 154 ISRILRSKF-------------------GKGEEEEADLERKEAEESEK-KAKHSIDGIL- 192
Query: 188 IAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRT-DAFSQHHLEPLECPFERQHYP 246
S++ SD+ S IDS+ RK R+ F+ LE LE FER HYP
Sbjct: 193 -----SERASAPQSDEGS---DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 247 EAYASP---------------------SHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPL 285
+ Y + + + G L N + G P+ P
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGG---FPPTAMP- 300
Query: 286 GRNLSTHQTYPVVADPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAF 345
T TY + + P +I Q + SS+ P L S V P N
Sbjct: 301 -----TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPST------VHQSTIPSN-- 347
Query: 346 PHAASVYGQFTGQALLSGREMVGPTLPGY-PPHIPTSGQGSYASSAIAGMVAGSEYSGNA 404
P ++S Y L S R + PP P++ + ++ V G +
Sbjct: 348 PDSSSAY------CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGG 401
Query: 405 YGHTPYSSYS 414
H P + Y+
Sbjct: 402 VPHQPQTDYA 411
>gi|31563342 paired box 3 isoform PAX3d [Homo sapiens]
Length = 484
Score = 209 bits (532), Expect = 4e-54
Identities = 154/430 (35%), Positives = 208/430 (48%), Gaps = 76/430 (17%)
Query: 9 GHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYET 68
G G +NQLGG F+NGRPLP +R +IV++AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 69 GSIRPGVIGGSKPK-VATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSS 127
GSIRPG IGGSKPK V TP V +KI +YKR+NP MF+WEIRD+LL + VCD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 128 INRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGLLG 187
I+RI+R+K G + + E+ +S+ + +SI+G+L
Sbjct: 154 ISRILRSKF-------------------GKGEEEEADLERKEAEESEK-KAKHSIDGIL- 192
Query: 188 IAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRT-DAFSQHHLEPLECPFERQHYP 246
S++ SD+ S IDS+ RK R+ F+ LE LE FER HYP
Sbjct: 193 -----SERASAPQSDEGS---DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 247 EAYASP---------------------SHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPL 285
+ Y + + + G L N + G P+ P
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGG---FPPTAMP- 300
Query: 286 GRNLSTHQTYPVVADPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAF 345
T TY + + P +I Q + SS+ P L S V P N
Sbjct: 301 -----TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPST------VHQSTIPSN-- 347
Query: 346 PHAASVYGQFTGQALLSGREMVGPTLPGY-PPHIPTSGQGSYASSAIAGMVAGSEYSGNA 404
P ++S Y L S R + PP P++ + ++ V G +
Sbjct: 348 PDSSSAY------CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGG 401
Query: 405 YGHTPYSSYS 414
H P + Y+
Sbjct: 402 VPHQPQTDYA 411
>gi|31563340 paired box 3 isoform PAX3 [Homo sapiens]
Length = 479
Score = 209 bits (532), Expect = 4e-54
Identities = 154/430 (35%), Positives = 208/430 (48%), Gaps = 76/430 (17%)
Query: 9 GHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYET 68
G G +NQLGG F+NGRPLP +R +IV++AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 69 GSIRPGVIGGSKPK-VATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSS 127
GSIRPG IGGSKPK V TP V +KI +YKR+NP MF+WEIRD+LL + VCD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 128 INRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGLLG 187
I+RI+R+K G + + E+ +S+ + +SI+G+L
Sbjct: 154 ISRILRSKF-------------------GKGEEEEADLERKEAEESEK-KAKHSIDGIL- 192
Query: 188 IAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRT-DAFSQHHLEPLECPFERQHYP 246
S++ SD+ S IDS+ RK R+ F+ LE LE FER HYP
Sbjct: 193 -----SERASAPQSDEGS---DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 247 EAYASP---------------------SHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPL 285
+ Y + + + G L N + G P+ P
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGG---FPPTAMP- 300
Query: 286 GRNLSTHQTYPVVADPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVGSGVPPFNAF 345
T TY + + P +I Q + SS+ P L S V P N
Sbjct: 301 -----TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPST------VHQSTIPSN-- 347
Query: 346 PHAASVYGQFTGQALLSGREMVGPTLPGY-PPHIPTSGQGSYASSAIAGMVAGSEYSGNA 404
P ++S Y L S R + PP P++ + ++ V G +
Sbjct: 348 PDSSSAY------CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGG 401
Query: 405 YGHTPYSSYS 414
H P + Y+
Sbjct: 402 VPHQPQTDYA 411
>gi|31563348 paired box 3 isoform PAX3g [Homo sapiens]
Length = 403
Score = 207 bits (528), Expect = 1e-53
Identities = 120/243 (49%), Positives = 153/243 (62%), Gaps = 31/243 (12%)
Query: 9 GHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYET 68
G G +NQLGG F+NGRPLP +R +IV++AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 69 GSIRPGVIGGSKPK-VATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSS 127
GSIRPG IGGSKPK V TP V +KI +YKR+NP MF+WEIRD+LL + VCD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 128 INRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGLLG 187
I+RI+R+K G + + E+ +S+ + +SI+G+L
Sbjct: 154 ISRILRSKF-------------------GKGEEEEADLERKEAEESEK-KAKHSIDGIL- 192
Query: 188 IAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRT-DAFSQHHLEPLECPFERQHYP 246
S++ SD+ S IDS+ RK R+ F+ LE LE FER HYP
Sbjct: 193 -----SERASAPQSDEGS---DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 247 EAY 249
+ Y
Sbjct: 245 DIY 247
>gi|31563346 paired box 3 isoform PAX3h [Homo sapiens]
Length = 407
Score = 207 bits (528), Expect = 1e-53
Identities = 120/243 (49%), Positives = 153/243 (62%), Gaps = 31/243 (12%)
Query: 9 GHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYET 68
G G +NQLGG F+NGRPLP +R +IV++AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 69 GSIRPGVIGGSKPK-VATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSS 127
GSIRPG IGGSKPK V TP V +KI +YKR+NP MF+WEIRD+LL + VCD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 128 INRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGLLG 187
I+RI+R+K G + + E+ +S+ + +SI+G+L
Sbjct: 154 ISRILRSKF-------------------GKGEEEEADLERKEAEESEK-KAKHSIDGIL- 192
Query: 188 IAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRT-DAFSQHHLEPLECPFERQHYP 246
S++ SD+ S IDS+ RK R+ F+ LE LE FER HYP
Sbjct: 193 -----SERASAPQSDEGS---DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 247 EAY 249
+ Y
Sbjct: 245 DIY 247
>gi|7524359 paired box 7 isoform 2 [Homo sapiens]
Length = 518
Score = 205 bits (522), Expect = 6e-53
Identities = 120/243 (49%), Positives = 147/243 (60%), Gaps = 35/243 (14%)
Query: 9 GHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYET 68
G G +NQLGG F+NGRPLP +R +IV++AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 69 GSIRPGVIGGSKPK-VATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSS 127
GSIRPG IGGSKP+ VATP V +KI +YKR+NP MF+WEIRDRLL +G CD TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSVSS 153
Query: 128 INRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGLLG 187
I+R++R K F + A K G + +SI+G+LG
Sbjct: 154 ISRVLRIK----FGKKEEEDEADKKEDDGEK------------------KAKHSIDGILG 191
Query: 188 IAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRT-DAFSQHHLEPLECPFERQHYP 246
DK D D ++S+ RK R+ F+ LE LE FER HYP
Sbjct: 192 ------DKGNRLDEGSD-----VESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYP 240
Query: 247 EAY 249
+ Y
Sbjct: 241 DIY 243
>gi|4505619 paired box 7 isoform 1 [Homo sapiens]
Length = 520
Score = 200 bits (509), Expect = 2e-51
Identities = 120/245 (48%), Positives = 147/245 (60%), Gaps = 37/245 (15%)
Query: 9 GHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYET 68
G G +NQLGG F+NGRPLP +R +IV++AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 69 GSIRPGVIGGSKPK-VATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPS--V 125
GSIRPG IGGSKP+ VATP V +KI +YKR+NP MF+WEIRDRLL +G CD TVPS V
Sbjct: 94 GSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLV 153
Query: 126 SSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGL 185
SSI+R++R K F + A K G + +SI+G+
Sbjct: 154 SSISRVLRIK----FGKKEEEDEADKKEDDGEK------------------KAKHSIDGI 191
Query: 186 LGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRT-DAFSQHHLEPLECPFERQH 244
LG DK D D ++S+ RK R+ F+ LE LE FER H
Sbjct: 192 LG------DKGNRLDEGSD-----VESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTH 240
Query: 245 YPEAY 249
YP+ Y
Sbjct: 241 YPDIY 245
>gi|207029223 paired box 7 isoform 3 [Homo sapiens]
Length = 505
Score = 200 bits (509), Expect = 2e-51
Identities = 120/245 (48%), Positives = 147/245 (60%), Gaps = 37/245 (15%)
Query: 9 GHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYET 68
G G +NQLGG F+NGRPLP +R +IV++AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 69 GSIRPGVIGGSKPK-VATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPS--V 125
GSIRPG IGGSKP+ VATP V +KI +YKR+NP MF+WEIRDRLL +G CD TVPS V
Sbjct: 94 GSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLV 153
Query: 126 SSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGL 185
SSI+R++R K F + A K G + +SI+G+
Sbjct: 154 SSISRVLRIK----FGKKEEEDEADKKEDDGEK------------------KAKHSIDGI 191
Query: 186 LGIAQPGSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRT-DAFSQHHLEPLECPFERQH 244
LG DK D D ++S+ RK R+ F+ LE LE FER H
Sbjct: 192 LG------DKGNRLDEGSD-----VESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTH 240
Query: 245 YPEAY 249
YP+ Y
Sbjct: 241 YPDIY 245
>gi|197276661 paired box 1 [Homo sapiens]
Length = 534
Score = 194 bits (494), Expect = 1e-49
Identities = 102/183 (55%), Positives = 122/183 (66%), Gaps = 8/183 (4%)
Query: 10 HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETG 69
+G +NQLGG FVNGRPLP +R RIV+LA G+RPCDISRQLRVSHGCVSKIL RY ETG
Sbjct: 99 YGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETG 158
Query: 70 SIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSIN 129
SI PG IGGSKP+V TP VV+ I DYK+ +P +FAWEIRDRLLA+GVCD VPSVSSI+
Sbjct: 159 SILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVPSVSSIS 218
Query: 130 RIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAV-----TPPESPQSDSLGSTYSING 184
RI+R K+ +L P +P + + P SP +GS + G
Sbjct: 219 RILRNKIG---SLAQPGPYEASKQPPSQPTLPYNHIYQYPYPSPVSPTGAKMGSHPGVPG 275
Query: 185 LLG 187
G
Sbjct: 276 TAG 278
>gi|7242167 paired box 9 [Homo sapiens]
Length = 341
Score = 194 bits (493), Expect = 1e-49
Identities = 109/205 (53%), Positives = 130/205 (63%), Gaps = 33/205 (16%)
Query: 11 GGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETGS 70
G +NQLGG FVNGRPLP +R RIV+LA G+RPCDISRQLRVSHGCVSKIL RY ETGS
Sbjct: 6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGS 65
Query: 71 IRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINR 130
I PG IGGSKP+V TP VV+ I YK+++P +FAWEIRDRLLA+GVCD VPSVSSI+R
Sbjct: 66 ILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISR 125
Query: 131 IIRTKV----QQ-----------------PFN------LPMDSCVATKSLSPGHTLIPSS 163
I+R K+ QQ P+N P+ + A PG IP S
Sbjct: 126 ILRNKIGNLAQQGHYDSYKQHQPTPQPALPYNHIYSYPSPITAAAAKVPTPPGVPAIPGS 185
Query: 164 AVTPPESPQSDSLGSTYSINGLLGI 188
P P S++S+ +LGI
Sbjct: 186 VAMPRTWP------SSHSVTDILGI 204
>gi|7524356 paired box 3 isoform PAX3b [Homo sapiens]
Length = 206
Score = 191 bits (484), Expect = 2e-48
Identities = 91/128 (71%), Positives = 108/128 (84%), Gaps = 1/128 (0%)
Query: 9 GHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYET 68
G G +NQLGG F+NGRPLP +R +IV++AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 69 GSIRPGVIGGSKPK-VATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSS 127
GSIRPG IGGSKPK V TP V +KI +YKR+NP MF+WEIRD+LL + VCD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 128 INRIIRTK 135
I+RI+R+K
Sbjct: 154 ISRILRSK 161
>gi|6654638 paired box 3 isoform PAX3a [Homo sapiens]
Length = 215
Score = 191 bits (484), Expect = 2e-48
Identities = 91/128 (71%), Positives = 108/128 (84%), Gaps = 1/128 (0%)
Query: 9 GHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYET 68
G G +NQLGG F+NGRPLP +R +IV++AH G+RPC ISRQLRVSHGCVSKIL RY ET
Sbjct: 34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQET 93
Query: 69 GSIRPGVIGGSKPK-VATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSS 127
GSIRPG IGGSKPK V TP V +KI +YKR+NP MF+WEIRD+LL + VCD +TVPSVSS
Sbjct: 94 GSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSS 153
Query: 128 INRIIRTK 135
I+RI+R+K
Sbjct: 154 ISRILRSK 161
>gi|170784824 paired box 4 [Homo sapiens]
Length = 343
Score = 164 bits (415), Expect = 2e-40
Identities = 86/155 (55%), Positives = 107/155 (69%), Gaps = 1/155 (0%)
Query: 13 LNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIR 72
+NQLGG FVNGRPLP RQ+IV LA G+RPCDISR L+VS+GCVSKILGRYY TG +
Sbjct: 1 MNQLGGLFVNGRPLPLDTRQQIVRLAVSGMRPCDISRILKVSNGCVSKILGRYYRTGVLE 60
Query: 73 PGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRII 132
P IGGSKP++ATP VV +I K + P +FAWEI+ +L AEG+C D PSVSSINR++
Sbjct: 61 PKGIGGSKPRLATPPVVARIAQLKGECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVL 120
Query: 133 RTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTP 167
R +Q+ LP + L+P S + TP
Sbjct: 121 RA-LQEDQGLPCTRLRSPAVLAPAVLTPHSGSETP 154
>gi|226423889 myocardin isoform 1 [Homo sapiens]
Length = 986
Score = 44.3 bits (103), Expect = 2e-04
Identities = 83/355 (23%), Positives = 129/355 (36%), Gaps = 74/355 (20%)
Query: 107 IRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFNLP-MDSCVATKSLSPGHTLIPSSAV 165
+ DRL C + VP+ I + T P LP S +T +LS G S++
Sbjct: 397 LMDRLRPFQDCSGNPVPNFGDITTV--TFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSS 454
Query: 166 TPPESPQSDSLGSTYSINGLLGIAQP-----------------------GSDKRKMDDSD 202
+PP SP S L S+ A P GS ++D D
Sbjct: 455 SPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLD 514
Query: 203 QDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFERQHYPEAYASPSHTKGEQGLY 262
+ ++ ++ Q + L+ + Q +E L ++Q S K
Sbjct: 515 SEKDKMLVEKQKVINELTWKLQQE---QRQVEELRMQLQKQKRNNC----SEKK------ 561
Query: 263 PLPLLNSTLDDGKATLT---PSNTPLGRNLSTHQTYPVVADPHSPFAIKQETPEVSS-SS 318
PLP L +++ +A + S P+ R S+ + +P P A Q S
Sbjct: 562 PLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHP----PACEAAQLQPLGNAHCVES 617
Query: 319 STPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGYPPHI 378
S +++ SS FL Q P A+ S + + P P P +
Sbjct: 618 SDQTNVLSSTFLSPQCSPQHSPL----------------GAVKSPQHISLPPSPNNPHFL 661
Query: 379 PTS----GQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRFPNSSLLSSPY 429
P+S G+G SS I+ V ++ SG GH P S P+SS L P+
Sbjct: 662 PSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFS-------PHSSSLHPPF 709
>gi|226423891 myocardin isoform 3 [Homo sapiens]
Length = 684
Score = 44.3 bits (103), Expect = 2e-04
Identities = 83/355 (23%), Positives = 129/355 (36%), Gaps = 74/355 (20%)
Query: 107 IRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFNLP-MDSCVATKSLSPGHTLIPSSAV 165
+ DRL C + VP+ I + T P LP S +T +LS G S++
Sbjct: 301 LMDRLRPFQDCSGNPVPNFGDITTV--TFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSS 358
Query: 166 TPPESPQSDSLGSTYSINGLLGIAQP-----------------------GSDKRKMDDSD 202
+PP SP S L S+ A P GS ++D D
Sbjct: 359 SPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLD 418
Query: 203 QDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFERQHYPEAYASPSHTKGEQGLY 262
+ ++ ++ Q + L+ + Q +E L ++Q S K
Sbjct: 419 SEKDKMLVEKQKVINELTWKLQQE---QRQVEELRMQLQKQKRNNC----SEKK------ 465
Query: 263 PLPLLNSTLDDGKATLT---PSNTPLGRNLSTHQTYPVVADPHSPFAIKQETPEVSS-SS 318
PLP L +++ +A + S P+ R S+ + +P P A Q S
Sbjct: 466 PLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHP----PACEAAQLQPLGNAHCVES 521
Query: 319 STPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGYPPHI 378
S +++ SS FL Q P A+ S + + P P P +
Sbjct: 522 SDQTNVLSSTFLSPQCSPQHSPL----------------GAVKSPQHISLPPSPNNPHFL 565
Query: 379 PTS----GQGSYASSAIAGMVAGSEYSGNAYGHTPYSSYSEAWRFPNSSLLSSPY 429
P+S G+G SS I+ V ++ SG GH P S P+SS L P+
Sbjct: 566 PSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFS-------PHSSSLHPPF 613
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,507,506
Number of Sequences: 37866
Number of extensions: 1063284
Number of successful extensions: 3405
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 3036
Number of HSP's gapped (non-prelim): 444
length of query: 450
length of database: 18,247,518
effective HSP length: 106
effective length of query: 344
effective length of database: 14,233,722
effective search space: 4896400368
effective search space used: 4896400368
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.