PAX8 35523

Name: PAX8	Sequence: fasta or formatted (398aa)		NCBI GI: 7524363
Description: paired box 8 isoform PAX8C		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [450aa] paired box 8 isoform PAX8A alt prot [387aa] paired box 8 isoform PAX8B alt prot [321aa] paired box 8 isoform PAX8D alt prot [287aa] paired box 8 isoform PAX8E
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 25 2 C cysteine 2.5 10 1 D aspartate 4.8 19 2 E glutamate 3.3 13 1 F phenylalanine 1.8 7 1 G glycine 7.5 30 2 H histidine 3.0 12 2 I isoleucine 4.0 16 2 K lysine 3.5 14 1 L leucine 7.3 29 2 M methionine 2.3 9 1 N asparagine 3.0 12 1 P proline 13.1 52 2 Q glutamine 4.5 18 2 R arginine 6.8 27 1 S serine 11.6 46 4 T threonine 6.3 25 1 V valine 5.0 20 2 W tryptophan 1.5 6 2 Y tyrosine 2.0 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paired box 8 isoform PAX8C PAX8 0.731 paired box 8 isoform PAX8A PAX8 0.728 paired box 8 isoform PAX8B PAX8 0.653 paired box 8 isoform PAX8D PAX8 0.627 paired box 8 isoform PAX8E PAX2 0.451 paired box protein 2 isoform c PAX2 0.444 paired box protein 2 isoform d PAX2 0.443 paired box protein 2 isoform b PAX2 0.431 paired box protein 2 isoform e PAX2 0.429 paired box protein 2 isoform a PAX5 0.389 paired box 5 PAX6 0.244 paired box gene 6 isoform a PAX6 0.244 paired box gene 6 isoform a PAX6 0.232 paired box gene 6 isoform b PAX3 0.231 paired box 3 isoform PAX3i PAX3 0.225 paired box 3 isoform PAX3g PAX3 0.225 paired box 3 isoform PAX3h PAX3 0.225 paired box 3 isoform PAX3e PAX3 0.225 paired box 3 isoform PAX3d PAX3 0.225 paired box 3 isoform PAX3 PAX7 0.224 paired box 7 isoform 2 PAX7 0.218 paired box 7 isoform 1 PAX7 0.218 paired box 7 isoform 3 PAX1 0.209 paired box 1 PAX9 0.209 paired box 9 PAX3 0.205 paired box 3 isoform PAX3b PAX3 0.205 paired box 3 isoform PAX3a PAX4 0.172 paired box 4 SRRM1 0.026 serine/arginine repetitive matrix 1 MUC7 0.023 mucin 7, secreted precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.