MYOCD 15347

Name: MYOCD	Sequence: fasta or formatted (684aa)		NCBI GI: 226423891
Description: myocardin isoform 3		Referenced in: Muscle Platelets and Megakaryocytes
Other entries for this name: alt prot [986aa] myocardin isoform 1 alt prot [938aa] myocardin isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 43 2 C cysteine 1.6 11 1 D aspartate 5.0 34 2 E glutamate 4.4 30 2 F phenylalanine 3.2 22 1 G glycine 5.7 39 2 H histidine 3.1 21 1 I isoleucine 2.2 15 1 K lysine 6.6 45 2 L leucine 8.2 56 2 M methionine 1.5 10 1 N asparagine 4.4 30 2 P proline 10.8 74 3 Q glutamine 8.0 55 7 R arginine 2.8 19 1 S serine 16.1 110 4 T threonine 3.9 27 2 V valine 5.1 35 1 W tryptophan 0.1 1 1 Y tyrosine 1.0 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 myocardin isoform 3 MYOCD 0.996 myocardin isoform 1 MYOCD 0.896 myocardin isoform 2 MKL2 0.233 megakaryoblastic leukemia 2 protein MKL1 0.221 megakaryoblastic leukemia 1 protein MAMSTR 0.028 MEF2 activating motif and SAP domain containing tra... MAMSTR 0.024 MEF2 activating motif and SAP domain containing tran... EP300 0.019 E1A binding protein p300 NACAD 0.017 NAC alpha domain containing NACAD 0.017 PREDICTED: NAC alpha domain containing NACAD 0.017 PREDICTED: NAC alpha domain containing NACAD 0.017 PREDICTED: NAC alpha domain containing NACAD 0.017 PREDICTED: NAC alpha domain containing NCOA6 0.016 nuclear receptor coactivator 6 SGK269 0.016 NKF3 kinase family member BAT2 0.015 HLA-B associated transcript-2 FLJ10404 0.015 hypothetical protein LOC54540 PAX8 0.014 paired box 8 isoform PAX8A ZMYND8 0.014 zinc finger, MYND-type containing 8 isoform a LOC643446 0.014 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.014 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.014 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.014 PREDICTED: similar to ribonucleic acid binding prote... LOC643446 0.013 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.013 PREDICTED: similar to ribonucleic acid binding prot... ANK2 0.013 ankyrin 2 isoform 1 RERE 0.013 atrophin-1 like protein isoform b RERE 0.013 atrophin-1 like protein isoform a RERE 0.013 atrophin-1 like protein isoform a POU6F2 0.013 POU domain, class 6, transcription factor 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.