MYOCD 15346

Name: MYOCD	Sequence: fasta or formatted (986aa)		NCBI GI: 226423889
Description: myocardin isoform 1		Referenced in: Muscle Platelets and Megakaryocytes
Other entries for this name: alt prot [684aa] myocardin isoform 3 alt prot [938aa] myocardin isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 61 2 C cysteine 1.3 13 1 D aspartate 5.5 54 2 E glutamate 5.0 49 2 F phenylalanine 3.4 34 1 G glycine 5.2 51 2 H histidine 3.0 30 1 I isoleucine 2.8 28 2 K lysine 5.9 58 2 L leucine 9.4 93 2 M methionine 1.9 19 1 N asparagine 4.3 42 2 P proline 9.7 96 3 Q glutamine 7.7 76 7 R arginine 3.4 34 2 S serine 15.2 150 4 T threonine 4.4 43 2 V valine 4.4 43 1 W tryptophan 0.4 4 1 Y tyrosine 0.8 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 myocardin isoform 1 MYOCD 0.899 myocardin isoform 2 MYOCD 0.691 myocardin isoform 3 MKL2 0.248 megakaryoblastic leukemia 2 protein MKL1 0.219 megakaryoblastic leukemia 1 protein MAMSTR 0.020 MEF2 activating motif and SAP domain containing tra... MAMSTR 0.016 MEF2 activating motif and SAP domain containing tran... MUC6 0.015 mucin 6, gastric EP300 0.013 E1A binding protein p300 KIF26B 0.013 kinesin family member 26B NACAD 0.012 NAC alpha domain containing NACAD 0.012 PREDICTED: NAC alpha domain containing NACAD 0.012 PREDICTED: NAC alpha domain containing NACAD 0.012 PREDICTED: NAC alpha domain containing NACAD 0.012 PREDICTED: NAC alpha domain containing MED15 0.011 mediator complex subunit 15 isoform b NCOA6 0.011 nuclear receptor coactivator 6 SGK269 0.011 NKF3 kinase family member BAT2 0.010 HLA-B associated transcript-2 FLJ10404 0.010 hypothetical protein LOC54540 PAX8 0.010 paired box 8 isoform PAX8A ZMYND8 0.010 zinc finger, MYND-type containing 8 isoform a LOC643446 0.010 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.010 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.010 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.010 PREDICTED: similar to ribonucleic acid binding prote... LOC643446 0.009 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.009 PREDICTED: similar to ribonucleic acid binding prot... ANK2 0.009 ankyrin 2 isoform 1 RERE 0.009 atrophin-1 like protein isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.