Search of human proteins with 56806673

Search of human proteins with 56806673

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
         (211 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]           440   e-124
gi|4504425 high-mobility group box 1 [Homo sapiens]                   412   e-115
gi|194688135 high-mobility group box 2 [Homo sapiens]                 341   2e-94
gi|194688133 high-mobility group box 2 [Homo sapiens]                 341   2e-94
gi|11321591 high-mobility group box 2 [Homo sapiens]                  341   2e-94
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]          310   6e-85
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]          309   1e-84
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]          309   1e-84
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]            308   2e-84
gi|71143137 high-mobility group box 3 [Homo sapiens]                  294   4e-80
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...   268   2e-72
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...   268   2e-72
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...   268   3e-72
gi|169212060 PREDICTED: high mobility group protein B3-like prot...   259   2e-69
gi|239745831 PREDICTED: high mobility group protein B3-like prot...   259   2e-69
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]          254   3e-68
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]          254   3e-68
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap...   254   3e-68
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...   241   4e-64
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...   241   4e-64
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...   241   4e-64
gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]          191   4e-49
gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]          191   4e-49
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...   186   1e-47
gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]          162   1e-40
gi|57232750 HMG2 like isoform 1 [Homo sapiens]                        139   2e-33
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     90   2e-18
gi|7662322 thymus high mobility group box protein TOX [Homo sapi...    74   7e-14
gi|226246533 TOX high mobility group box family member 3 isoform...    74   1e-13
gi|226054295 TOX high mobility group box family member 3 isoform...    74   1e-13

>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score =  440 bits (1131), Expect = e-124
 Identities = 211/211 (100%), Positives = 211/211 (100%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL
Sbjct: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180

Query: 181 SKKKKEEEEDEEDEEDEEEEDEEDEEDDDDE 211
           SKKKKEEEEDEEDEEDEEEEDEEDEEDDDDE
Sbjct: 181 SKKKKEEEEDEEDEEDEEEEDEEDEEDDDDE 211


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score =  412 bits (1058), Expect = e-115
 Identities = 200/215 (93%), Positives = 205/215 (95%), Gaps = 4/215 (1%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           MGKGDPKKPRGKMSSYAFFVQTCREEHKKKH DASVNFSEFS KCSERWKTMSAKEKGKF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           EDMAKADK  YER+MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY PKIKGEHPGL
Sbjct: 61  EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 120

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGDVAKKLGEMWNNTAADDKQP EKKAAKLKEKYEKDIAAY+AKGKP+AAKKGVVKAEK
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 180

Query: 181 SKKKKEEEEDEEDEEDEE----EEDEEDEEDDDDE 211
           SKKKKEEEEDEEDEEDEE    EEDE++EEDDDDE
Sbjct: 181 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  341 bits (875), Expect = 2e-94
 Identities = 159/209 (76%), Positives = 183/209 (87%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           MGKGDP KPRGKMSSYAFFVQTCREEHKKKH D+SVNF+EFS KCSERWKTMSAKEK KF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           EDMAK+DK  Y+R+MK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+ PKIK EHPGL
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGD AKKLGEMW+  +A DKQP E+KAAKLKEKYEKDIAAY+AKGK EA KKG  +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 181 SKKKKEEEEDEEDEEDEEEEDEEDEEDDD 209
           SKKK E E++EE+EE+E+E++EE++ED++
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  341 bits (875), Expect = 2e-94
 Identities = 159/209 (76%), Positives = 183/209 (87%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           MGKGDP KPRGKMSSYAFFVQTCREEHKKKH D+SVNF+EFS KCSERWKTMSAKEK KF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           EDMAK+DK  Y+R+MK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+ PKIK EHPGL
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGD AKKLGEMW+  +A DKQP E+KAAKLKEKYEKDIAAY+AKGK EA KKG  +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 181 SKKKKEEEEDEEDEEDEEEEDEEDEEDDD 209
           SKKK E E++EE+EE+E+E++EE++ED++
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  341 bits (875), Expect = 2e-94
 Identities = 159/209 (76%), Positives = 183/209 (87%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           MGKGDP KPRGKMSSYAFFVQTCREEHKKKH D+SVNF+EFS KCSERWKTMSAKEK KF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           EDMAK+DK  Y+R+MK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+ PKIK EHPGL
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGD AKKLGEMW+  +A DKQP E+KAAKLKEKYEKDIAAY+AKGK EA KKG  +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 181 SKKKKEEEEDEEDEEDEEEEDEEDEEDDD 209
           SKKK E E++EE+EE+E+E++EE++ED++
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score =  310 bits (794), Expect = 6e-85
 Identities = 152/184 (82%), Positives = 164/184 (89%), Gaps = 7/184 (3%)

Query: 35  SVNFSEFSNKCSERWKTMSAKEKGKF-------EDMAKADKTHYERQMKTYIPPKGETKK 87
           SVNFSEFS KCSERWK MSAKEKGKF       EDMAKADK HY+R+MKTYIPPKGETKK
Sbjct: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223

Query: 88  KFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPGEKK 147
           KFKDPNAPKRPPSAFFL+ SEY PKIKGE PGLS GDVAKKLGEMWNNTAADDKQP EK+
Sbjct: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283

Query: 148 AAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEDEEDEED 207
           +AKLKEKYEKDIAAY+AKGK +AA  GVVKA KSKKKKEEEE+EEDEEDEEEE +EDE++
Sbjct: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEDEDE 343

Query: 208 DDDE 211
           +DDE
Sbjct: 344 EDDE 347



 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 52/207 (25%), Positives = 75/207 (36%), Gaps = 78/207 (37%)

Query: 5   DPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMA 64
           DP  P+   S  AFF+       K K     ++F + + K  E W   +A +K  +E  +
Sbjct: 227 DPNAPKRPPS--AFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGD 124
              K  YE+ +  Y                                 + KG+H       
Sbjct: 285 AKLKEKYEKDIAAY---------------------------------RAKGKH------- 304

Query: 125 VAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKK 184
                         D    G  KAAK K+K                      K E+  ++
Sbjct: 305 --------------DAANNGVVKAAKSKKK----------------------KEEEENEE 328

Query: 185 KEEEEDEEDEEDEEEEDEEDEEDDDDE 211
            EE+E+EE +EDE+EED+EDEED DDE
Sbjct: 329 DEEDEEEEKDEDEDEEDDEDEEDGDDE 355


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score =  309 bits (792), Expect = 1e-84
 Identities = 154/185 (83%), Positives = 165/185 (89%), Gaps = 8/185 (4%)

Query: 35  SVNFSEFSNKCSERWKTMSAKEKGKF-------EDMAKADKTHYERQMKTYIPPKGETKK 87
           SVNFSEFS KCSERWK MSAKEKGKF       EDMAKADK HY+R+MKTYIPPKGETKK
Sbjct: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223

Query: 88  KFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPGEKK 147
           KFKDPNAPKRPPSAFFL+ SEY PKIKGE PGLS GDVAKKLGEMWNNTAADDKQP EK+
Sbjct: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283

Query: 148 AAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE-DEEDEE 206
           +AKLKEKYEKDIAAY+AKGK +AA  GVVKA KSKKKKEEEE+EEDEEDEEEE DEEDE+
Sbjct: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDED 343

Query: 207 DDDDE 211
           ++DDE
Sbjct: 344 EEDDE 348



 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 51/207 (24%), Positives = 79/207 (38%), Gaps = 77/207 (37%)

Query: 5   DPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMA 64
           DP  P+   S  AFF+       K K     ++F + + K  E W   +A +K  +E  +
Sbjct: 227 DPNAPKRPPS--AFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGD 124
              K  YE+ +  Y                                 + KG+H       
Sbjct: 285 AKLKEKYEKDIAAY---------------------------------RAKGKH------- 304

Query: 125 VAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKK 184
                         D    G  KAAK K+K E+                     E++++ 
Sbjct: 305 --------------DAANNGVVKAAKSKKKKEE---------------------EENEED 329

Query: 185 KEEEEDEEDEEDEEEEDEEDEEDDDDE 211
           +E+EE+E+DEEDE+EED+EDEE+D D+
Sbjct: 330 EEDEEEEKDEEDEDEEDDEDEEEDGDD 356


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score =  309 bits (792), Expect = 1e-84
 Identities = 154/185 (83%), Positives = 165/185 (89%), Gaps = 8/185 (4%)

Query: 35  SVNFSEFSNKCSERWKTMSAKEKGKF-------EDMAKADKTHYERQMKTYIPPKGETKK 87
           SVNFSEFS KCSERWK MSAKEKGKF       EDMAKADK HY+R+MKTYIPPKGETKK
Sbjct: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223

Query: 88  KFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPGEKK 147
           KFKDPNAPKRPPSAFFL+ SEY PKIKGE PGLS GDVAKKLGEMWNNTAADDKQP EK+
Sbjct: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283

Query: 148 AAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE-DEEDEE 206
           +AKLKEKYEKDIAAY+AKGK +AA  GVVKA KSKKKKEEEE+EEDEEDEEEE DEEDE+
Sbjct: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDED 343

Query: 207 DDDDE 211
           ++DDE
Sbjct: 344 EEDDE 348



 Score = 61.6 bits (148), Expect = 5e-10
 Identities = 53/207 (25%), Positives = 79/207 (38%), Gaps = 77/207 (37%)

Query: 5   DPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMA 64
           DP  P+   S  AFF+       K K     ++F + + K  E W   +A +K  +E  +
Sbjct: 227 DPNAPKRPPS--AFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGD 124
              K  YE+ +  Y                                 + KG+H       
Sbjct: 285 AKLKEKYEKDIAAY---------------------------------RAKGKH------- 304

Query: 125 VAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKK 184
                         D    G  KAAK K+K E+                     E++++ 
Sbjct: 305 --------------DAANNGVVKAAKSKKKKEE---------------------EENEED 329

Query: 185 KEEEEDEEDEEDEEEEDEEDEEDDDDE 211
           +E+EE+E+DEEDE+EED+EDEED DDE
Sbjct: 330 EEDEEEEKDEEDEDEEDDEDEEDGDDE 356


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score =  308 bits (789), Expect = 2e-84
 Identities = 149/181 (82%), Positives = 161/181 (88%)

Query: 25  EEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMAKADKTHYERQMKTYIPPKGE 84
           EEHKKK+ DASV FSEF  KCSE WKT+ AKEKGKFEDMAKADK HYER+MKTYIPPKGE
Sbjct: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758

Query: 85  TKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPG 144
            KKKFKDPNAPKRPP AFFLFCSEY PKIKGEHPGLSI DV KKL  MWNNTAA DKQ  
Sbjct: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818

Query: 145 EKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEDEED 204
           EKKAAKLKEKY+KDIAAY+AKGKP +AKK VVKAEKSKKKKEEEEDEEDE++EE E+++D
Sbjct: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDDD 878

Query: 205 E 205
           +
Sbjct: 879 K 879



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 9/93 (9%)

Query: 5   DPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMA 64
           DP  P+    ++  F    R + K +H   S++  +   K +  W   +A +K  +E  A
Sbjct: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822

Query: 65  KADKTHYERQMKTYIPPKGETKKKFKDPNAPKR 97
              K  Y++ +  Y       + K K  +A KR
Sbjct: 823 AKLKEKYKKDIAAY-------RAKGKPNSAKKR 848


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score =  294 bits (752), Expect = 4e-80
 Identities = 143/205 (69%), Positives = 168/205 (81%), Gaps = 5/205 (2%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M KGDPKKP+GKMS+YAFFVQTCREEHKKK+ +  VNF+EFS KCSERWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           ++MAKADK  Y+R+MK Y P KG  KKK  DPNAPKRPPS FFLFCSE+ PKIK  +PG+
Sbjct: 61  DEMAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 118

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGDVAKKLGEMWNN    +KQP   KAAKLKEKYEKD+A Y++KGK + AK     A+ 
Sbjct: 119 SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKG---PAKV 175

Query: 181 SKKKKEEEEDEEDEEDEEEEDEEDE 205
           ++KK EEE++EE+EE+EEEE+EEDE
Sbjct: 176 ARKKVEEEDEEEEEEEEEEEEEEDE 200


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  268 bits (686), Expect = 2e-72
 Identities = 133/206 (64%), Positives = 162/206 (78%), Gaps = 6/206 (2%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M KGDPKKP+GKMS+YAF VQTC +EHKKK+ +  VNF+EFS KCS RWKTMS+KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
            +MAKAD+  Y+R+MK Y P KG  KK   DPNAPKRPPS FFLFCSE+ PKIK  +PG+
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGDVAKKLGEMWNN    +KQP   KAAKLKEKYEKD+   + KGK   AK+    A+ 
Sbjct: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKR---PAKV 174

Query: 181 SKKKKEEEEDEEDEEDEEEEDEEDEE 206
           ++KK EEE++E++EE+E+E+DEEDE+
Sbjct: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  268 bits (686), Expect = 2e-72
 Identities = 133/206 (64%), Positives = 162/206 (78%), Gaps = 6/206 (2%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M KGDPKKP+GKMS+YAF VQTC +EHKKK+ +  VNF+EFS KCS RWKTMS+KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
            +MAKAD+  Y+R+MK Y P KG  KK   DPNAPKRPPS FFLFCSE+ PKIK  +PG+
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGDVAKKLGEMWNN    +KQP   KAAKLKEKYEKD+   + KGK   AK+    A+ 
Sbjct: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKR---PAKV 174

Query: 181 SKKKKEEEEDEEDEEDEEEEDEEDEE 206
           ++KK EEE++E++EE+E+E+DEEDE+
Sbjct: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200


>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  268 bits (685), Expect = 3e-72
 Identities = 133/206 (64%), Positives = 162/206 (78%), Gaps = 6/206 (2%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M KGDPKKP+GKMS+YAF VQTC +EHKKK+ +  VNF+EFS KCS RWKTMS+KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
            +MAKAD+  Y+R+MK Y P KG  KK   DPNAPKRPPS FFLFCSE+ PKIK  +PG+
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGDVAKKLGEMWNN    +KQP   KAAKLKEKYEKD+   + KGK   AK+    A+ 
Sbjct: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKR---PAKV 174

Query: 181 SKKKKEEEEDEEDEEDEEEEDEEDEE 206
           ++KK EEE++E++EE+E+E+DEEDE+
Sbjct: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200


>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  259 bits (661), Expect = 2e-69
 Identities = 126/194 (64%), Positives = 149/194 (76%), Gaps = 7/194 (3%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M KGDPKKP+GKMS+YAFFVQTCREEHKKK+    +NF+EFS KCSERWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
            ++AKADK HY++++K Y P KG  KK   DPNAPKRPPS FFLFCSE+ PK K  +PG+
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKGGKKK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGI 117

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
            IGDVAKKLGEMW N    +KQP   +AAKLKEKYEKD+A Y++KGK + AK       K
Sbjct: 118 PIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPA----K 173

Query: 181 SKKKKEEEEDEEDE 194
             +KK EEEDE++E
Sbjct: 174 VAQKKVEEEDEDEE 187


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  259 bits (661), Expect = 2e-69
 Identities = 126/194 (64%), Positives = 149/194 (76%), Gaps = 7/194 (3%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M KGDPKKP+GKMS+YAFFVQTCREEHKKK+    +NF+EFS KCSERWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
            ++AKADK HY++++K Y P KG  KK   DPNAPKRPPS FFLFCSE+ PK K  +PG+
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKGGKKK---DPNAPKRPPSGFFLFCSEFCPKSKSTNPGI 117

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
            IGDVAKKLGEMW N    +KQP   +AAKLKEKYEKD+A Y++KGK + AK       K
Sbjct: 118 PIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPA----K 173

Query: 181 SKKKKEEEEDEEDE 194
             +KK EEEDE++E
Sbjct: 174 VAQKKVEEEDEDEE 187


>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  254 bits (650), Expect = 3e-68
 Identities = 128/205 (62%), Positives = 158/205 (77%), Gaps = 4/205 (1%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M +GD KKP+GKMS+YAFF QTCREEHKKK+ +  VNF EFS KCSE+ KTMS KEK KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           ++MAK DK HY+++MK   P +G  KK   DPNA KRP S FFLFCSE+HPKIK  +PG+
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKK---DPNALKRPLSGFFLFCSEFHPKIKSTNPGI 117

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGD+AKKLGEMW N +  +KQP   KAA LKEKYEKD+A Y++KGK ++A KG  K   
Sbjct: 118 SIGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSA-KGPTKIAW 176

Query: 181 SKKKKEEEEDEEDEEDEEEEDEEDE 205
            K K++++EDEE+EE+EEE+ EE E
Sbjct: 177 KKVKEKDKEDEEEEEEEEEKKEEGE 201


>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  254 bits (650), Expect = 3e-68
 Identities = 128/205 (62%), Positives = 158/205 (77%), Gaps = 4/205 (1%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M +GD KKP+GKMS+YAFF QTCREEHKKK+ +  VNF EFS KCSE+ KTMS KEK KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           ++MAK DK HY+++MK   P +G  KK   DPNA KRP S FFLFCSE+HPKIK  +PG+
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKK---DPNALKRPLSGFFLFCSEFHPKIKSTNPGI 117

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGD+AKKLGEMW N +  +KQP   KAA LKEKYEKD+A Y++KGK ++A KG  K   
Sbjct: 118 SIGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSA-KGPTKIAW 176

Query: 181 SKKKKEEEEDEEDEEDEEEEDEEDE 205
            K K++++EDEE+EE+EEE+ EE E
Sbjct: 177 KKVKEKDKEDEEEEEEEEEKKEEGE 201


>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
           sapiens]
          Length = 201

 Score =  254 bits (650), Expect = 3e-68
 Identities = 128/205 (62%), Positives = 158/205 (77%), Gaps = 4/205 (1%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M +GD KKP+GKMS+YAFF QTCREEHKKK+ +  VNF EFS KCSE+ KTMS KEK KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           ++MAK DK HY+++MK   P +G  KK   DPNA KRP S FFLFCSE+HPKIK  +PG+
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKK---DPNALKRPLSGFFLFCSEFHPKIKSTNPGI 117

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGD+AKKLGEMW N +  +KQP   KAA LKEKYEKD+A Y++KGK ++A KG  K   
Sbjct: 118 SIGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSA-KGPTKIAW 176

Query: 181 SKKKKEEEEDEEDEEDEEEEDEEDE 205
            K K++++EDEE+EE+EEE+ EE E
Sbjct: 177 KKVKEKDKEDEEEEEEEEEKKEEGE 201


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  241 bits (614), Expect = 4e-64
 Identities = 126/195 (64%), Positives = 146/195 (74%), Gaps = 11/195 (5%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M KGDPKKP+GKMS+Y FFVQTCREE KKK+    VNF+EFS KCSERWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           ++MAK DK H +R+MK   P KG  KKK  DP+APKRPPS FFLF SE  PKIK  +PG+
Sbjct: 58  DEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGI 113

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGDVAKKLGEMWNN    +KQP   K AKLKEKYEKD+A  ++KGK + +K    +  K
Sbjct: 114 SIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSK----RPAK 169

Query: 181 SKKKKEEEEDEEDEE 195
              KK EEEDE++EE
Sbjct: 170 VAWKKVEEEDEDEEE 184


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  241 bits (614), Expect = 4e-64
 Identities = 126/195 (64%), Positives = 146/195 (74%), Gaps = 11/195 (5%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M KGDPKKP+GKMS+Y FFVQTCREE KKK+    VNF+EFS KCSERWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           ++MAK DK H +R+MK   P KG  KKK  DP+APKRPPS FFLF SE  PKIK  +PG+
Sbjct: 58  DEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGI 113

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGDVAKKLGEMWNN    +KQP   K AKLKEKYEKD+A  ++KGK + +K    +  K
Sbjct: 114 SIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSK----RPAK 169

Query: 181 SKKKKEEEEDEEDEE 195
              KK EEEDE++EE
Sbjct: 170 VAWKKVEEEDEDEEE 184


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score =  241 bits (614), Expect = 4e-64
 Identities = 126/195 (64%), Positives = 146/195 (74%), Gaps = 11/195 (5%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           M KGDPKKP+GKMS+Y FFVQTCREE KKK+    VNF+EFS KCSERWKTMS KEK KF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120
           ++MAK DK H +R+MK   P KG  KKK  DP+APKRPPS FFLF SE  PKIK  +PG+
Sbjct: 58  DEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGI 113

Query: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180
           SIGDVAKKLGEMWNN    +KQP   K AKLKEKYEKD+A  ++KGK + +K    +  K
Sbjct: 114 SIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSK----RPAK 169

Query: 181 SKKKKEEEEDEEDEE 195
              KK EEEDE++EE
Sbjct: 170 VAWKKVEEEDEDEEE 184


>gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  191 bits (485), Expect = 4e-49
 Identities = 94/125 (75%), Positives = 102/125 (81%), Gaps = 1/125 (0%)

Query: 65  KADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGD 124
           K D  HYER+MK YIPPK ETK KF+DPNAPK PP AFF+F SE  PKIK EHPGLSI D
Sbjct: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92

Query: 125 VAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKK 184
           VAKKLGEMWN  A DDK P EKKA KLKEKYEKDIAA+  KGKP+AAKKG +KAEK KKK
Sbjct: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152

Query: 185 KEEEE 189
           KEE++
Sbjct: 153 KEEDK 157



 Score = 29.6 bits (65), Expect = 2.0
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 5   DPKKPRGKMSSYAFFVQTCREEHK-KKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDM 63
           DP  P  K    AFF+ +  +  K K+H   S+  S+ + K  E W  ++  +K  +E  
Sbjct: 60  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSI--SDVAKKLGEMWNYIAEDDKHPYEKK 115

Query: 64  AKADKTHYERQMKTY 78
           A   K  YE+ +  +
Sbjct: 116 AVKLKEKYEKDIAAF 130


>gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  191 bits (485), Expect = 4e-49
 Identities = 94/125 (75%), Positives = 102/125 (81%), Gaps = 1/125 (0%)

Query: 65  KADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGD 124
           K D  HYER+MK YIPPK ETK KF+DPNAPK PP AFF+F SE  PKIK EHPGLSI D
Sbjct: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92

Query: 125 VAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKK 184
           VAKKLGEMWN  A DDK P EKKA KLKEKYEKDIAA+  KGKP+AAKKG +KAEK KKK
Sbjct: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152

Query: 185 KEEEE 189
           KEE++
Sbjct: 153 KEEDK 157



 Score = 29.6 bits (65), Expect = 2.0
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 5   DPKKPRGKMSSYAFFVQTCREEHK-KKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDM 63
           DP  P  K    AFF+ +  +  K K+H   S+  S+ + K  E W  ++  +K  +E  
Sbjct: 60  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSI--SDVAKKLGEMWNYIAEDDKHPYEKK 115

Query: 64  AKADKTHYERQMKTY 78
           A   K  YE+ +  +
Sbjct: 116 AVKLKEKYEKDIAAF 130


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score =  186 bits (473), Expect = 1e-47
 Identities = 98/156 (62%), Positives = 114/156 (73%), Gaps = 8/156 (5%)

Query: 40  EFSNKCSERWKTMSAKEKGKFEDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPP 99
           EFS KCSERWKTMS KEK KF++MAK DK H +R+MK   P KG  KKK  DP+APKRPP
Sbjct: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPP 74

Query: 100 SAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDI 159
           S FFLF SE  PKIK  +PG+SIGDVAKKLGEMWNN    +KQP   K AKLKEKYEKD+
Sbjct: 75  SGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDV 134

Query: 160 AAYQAKGKPEAAKKGVVKAEKSKKKKEEEEDEEDEE 195
           A  ++KGK + +K    +  K   KK EEEDE++EE
Sbjct: 135 ADSKSKGKFDGSK----RPAKVAWKKVEEEDEDEEE 166



 Score = 31.2 bits (69), Expect = 0.67
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 7/95 (7%)

Query: 3   KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFED 62
           K DP  P+   S +  F    R   K K ++  ++  + + K  E W  ++  EK  +  
Sbjct: 64  KKDPSAPKRPPSGFFLFSSEIRP--KIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYIT 121

Query: 63  MAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKR 97
                K  YE+ +        ++K KF     P +
Sbjct: 122 KTAKLKEKYEKDV-----ADSKSKGKFDGSKRPAK 151


>gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 227

 Score =  162 bits (411), Expect = 1e-40
 Identities = 81/108 (75%), Positives = 89/108 (82%), Gaps = 1/108 (0%)

Query: 82  KGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
           + ETK KF+DPNAPK PP AFF+F SE  PKIK EHPGLSI DVAKKLGEMWN  A DDK
Sbjct: 78  RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDK 136

Query: 142 QPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKKKEEEE 189
            P EKKA KLKEKYEKDIAA+  KGKP+AAKKG +KAEK KKKKEE++
Sbjct: 137 HPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEEDK 184



 Score = 29.6 bits (65), Expect = 2.0
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 5   DPKKPRGKMSSYAFFVQTCREEHK-KKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDM 63
           DP  P  K    AFF+ +  +  K K+H   S+  S+ + K  E W  ++  +K  +E  
Sbjct: 87  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSI--SDVAKKLGEMWNYIAEDDKHPYEKK 142

Query: 64  AKADKTHYERQMKTY 78
           A   K  YE+ +  +
Sbjct: 143 AVKLKEKYEKDIAAF 157


>gi|57232750 HMG2 like isoform 1 [Homo sapiens]
          Length = 186

 Score =  139 bits (349), Expect = 2e-33
 Identities = 66/164 (40%), Positives = 103/164 (62%), Gaps = 4/164 (2%)

Query: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60
           MGK    KP+  +SSY  F+   R + K++  +  V F EFS KCSE+W+++S  EK K+
Sbjct: 1   MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60

Query: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFK-DPNAPKRPPSAFFLFCSEYHPKIKGEHPG 119
           E +AK DK  Y+ +M  Y+   G+ KK+ K DP  P+RPPS+F LFC +++ ++K E+P 
Sbjct: 61  EALAKLDKARYQEEMMNYV---GKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPN 117

Query: 120 LSIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQ 163
            S+  VAK  G+MW+     +K P E++ A L+ KY +++  Y+
Sbjct: 118 WSVVQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYR 161



 Score = 35.8 bits (81), Expect = 0.027
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 95  PKRPPSAFFLFCSEYHPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPGEKKAAKLK 152
           PK   S++  F   Y  K K + P   +G  + ++K  E W + +  +K   E  A   K
Sbjct: 9   PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68

Query: 153 EKYEKDIAAYQAKGK 167
            +Y++++  Y  K K
Sbjct: 69  ARYQEEMMNYVGKRK 83


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 11/158 (6%)

Query: 29  KKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMAKADKTHYERQMKTYIPPKGETKKK 88
           ++  D +  F   ++  S   +  S +++ K + + KA      +  K     K    KK
Sbjct: 486 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRK-----KPVEVKK 540

Query: 89  FKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPGEKKA 148
            KDPNAPKRP SA+ L+ +    KIK +HPG+SI D++KK GE+W   + + K+  ++KA
Sbjct: 541 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 600

Query: 149 AKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEKSKKKKE 186
              +  YEK +  Y+  G+ E++K+     +KSKKKK+
Sbjct: 601 EDARRDYEKAMKEYEG-GRGESSKR-----DKSKKKKK 632



 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 24/160 (15%)

Query: 5   DPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMA 64
           DP  P+  MS+Y  ++   RE+ K  H   S+  ++ S K  E WK MS ++K +++  A
Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWDRKA 600

Query: 65  KADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHP-----G 119
           +  +  YE+ MK Y   +GE+ K+ K     K               K+K E       G
Sbjct: 601 EDARRDYEKAMKEYEGGRGESSKRDKSKKKKK--------------VKVKMEKKSTPSRG 646

Query: 120 LSIGDVAKKLGEMWNN---TAADDKQPGEKKAAKLKEKYE 156
            S    +++L E + +    ++D+   GE K+ K + + E
Sbjct: 647 SSSKSSSRQLSESFKSKEFVSSDESSSGENKSKKKRRRSE 686


>gi|7662322 thymus high mobility group box protein TOX [Homo
           sapiens]
          Length = 526

 Score = 74.3 bits (181), Expect = 7e-14
 Identities = 35/84 (41%), Positives = 52/84 (61%)

Query: 81  PKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 140
           PK   KKK KDPN P++P SA+ LF  +    IKG++P  + G+V+K +  MW+    + 
Sbjct: 247 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQ 306

Query: 141 KQPGEKKAAKLKEKYEKDIAAYQA 164
           KQ  +KK    K++Y K +AAY+A
Sbjct: 307 KQVYKKKTEAAKKEYLKQLAAYRA 330



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 30/143 (20%)

Query: 3   KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFED 62
           K DP +P+  +S+YA F +  +   K ++ +A+  F E S   +  W  +  ++K  ++ 
Sbjct: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDGLGEEQKQVYKK 312

Query: 63  MAKADKTHYERQMKTYIPPKGETKKKFKDP-------------------NAPKRPPSAFF 103
             +A K  Y +Q+  Y        K + +P                   + P +  SA +
Sbjct: 313 KTEAAKKEYLKQLAAY--RASLVSKSYSEPVDVKTSQPPQLINSKPSVFHGPSQAHSALY 370

Query: 104 LFCSEYH------PKIKGEHPGL 120
           L  S YH      P +   HP L
Sbjct: 371 L-SSHYHQQPGMNPHLTAMHPSL 392


>gi|226246533 TOX high mobility group box family member 3 isoform 2
           [Homo sapiens]
          Length = 571

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 36/91 (39%), Positives = 56/91 (61%)

Query: 81  PKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 140
           PK   KKK KDPN P++P SA+ LF  +    IKG++P  + G+V+K +  MW++   + 
Sbjct: 236 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ 295

Query: 141 KQPGEKKAAKLKEKYEKDIAAYQAKGKPEAA 171
           KQ  ++K    K++Y K +AAY+A    +AA
Sbjct: 296 KQVYKRKTEAAKKEYLKALAAYRASLVSKAA 326



 Score = 36.6 bits (83), Expect = 0.016
 Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 3   KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFED 62
           K DP +P+  +S+YA F +  +   K ++ +A+  F E S   +  W ++  ++K  ++ 
Sbjct: 244 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDSLGEEQKQVYKR 301

Query: 63  MAKADKTHYERQMKTY 78
             +A K  Y + +  Y
Sbjct: 302 KTEAAKKEYLKALAAY 317


>gi|226054295 TOX high mobility group box family member 3 isoform 1
           [Homo sapiens]
          Length = 576

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 36/91 (39%), Positives = 56/91 (61%)

Query: 81  PKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 140
           PK   KKK KDPN P++P SA+ LF  +    IKG++P  + G+V+K +  MW++   + 
Sbjct: 241 PKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQ 300

Query: 141 KQPGEKKAAKLKEKYEKDIAAYQAKGKPEAA 171
           KQ  ++K    K++Y K +AAY+A    +AA
Sbjct: 301 KQVYKRKTEAAKKEYLKALAAYRASLVSKAA 331



 Score = 36.6 bits (83), Expect = 0.016
 Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 3   KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFED 62
           K DP +P+  +S+YA F +  +   K ++ +A+  F E S   +  W ++  ++K  ++ 
Sbjct: 249 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDSLGEEQKQVYKR 306

Query: 63  MAKADKTHYERQMKTY 78
             +A K  Y + +  Y
Sbjct: 307 KTEAAKKEYLKALAAY 322


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.304    0.125    0.356 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,341,657
Number of Sequences: 37866
Number of extensions: 567465
Number of successful extensions: 38226
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 334
Number of HSP's that attempted gapping in prelim test: 7376
Number of HSP's gapped (non-prelim): 13964
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.