Guide to the Human Genome
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Name: PPP2R5E Sequence: fasta or formatted (467aa) NCBI GI: 5453956
Description:

epsilon isoform of regulatory subunit B56, protein phosphatase 2A

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         17           1
 C cysteine            1.5          7           2
 D aspartate           4.3         20           1
 E glutamate           9.6         45           2
 F phenylalanine       6.4         30           2
 G glycine             2.6         12           1
 H histidine           1.7          8           1
 I isoleucine          6.4         30           2
 K lysine              7.9         37           3
 L leucine            12.0         56           2
 M methionine          2.4         11           1
 N asparagine          3.0         14           2
 P proline             5.8         27           2
 Q glutamine           4.9         23           2
 R arginine            5.6         26           2
 S serine              7.9         37           3
 T threonine           4.1         19           2
 V valine              6.0         28           2
 W tryptophan          1.1          5           1
 Y tyrosine            3.2         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epsilon isoform of regulatory subunit B56, protein ph... 
PPP2R5A               0.798   protein phosphatase 2, regulatory subunit B (B56), al...
PPP2R5B               0.750   beta isoform of regulatory subunit B56, protein phosp...
PPP2R5D               0.664   delta isoform of regulatory subunit B56, protein phos...
PPP2R5C               0.663   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5C               0.650   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.650   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.650   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.648   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5D               0.644   delta isoform of regulatory subunit B56, protein pho...
PPP2R5D               0.637   delta isoform of regulatory subunit B56, protein pho...
FAM186A               0.010   family with sequence similarity 186, member A [Homo...
KIF16B                0.010   kinesin-like motor protein C20orf23 
LAMA2                 0.008   laminin alpha 2 subunit isoform a precursor 
RNF20                 0.008   ring finger protein 20 
NCOR1                 0.007   nuclear receptor co-repressor 1 
GOLGB1                0.006   golgi autoantigen, golgin subfamily b, macrogolgin ...
LOC283685             0.006   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283685             0.006   PREDICTED: golgi autoantigen, golgin subfamily a-li...
EFR3B                 0.006   EFR3 homolog B 
PPP1R9A               0.006   protein phosphatase 1, regulatory (inhibitor) subuni...
ANO2                  0.006   anoctamin 2 
CLIP1                 0.006   restin isoform b 
CLIP1                 0.006   restin isoform a 
KTN1                  0.004   kinectin 1 isoform b 
KTN1                  0.004   kinectin 1 isoform a 
KTN1                  0.004   kinectin 1 isoform c 
KTN1                  0.004   kinectin 1 isoform a 
LOC100133698          0.004   PREDICTED: hypothetical protein 
SMC3                  0.004   structural maintenance of chromosomes 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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