Guide to the Human Genome
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Name: PPP2R5C Sequence: fasta or formatted (449aa) NCBI GI: 31083243
Description:

gamma isoform of regulatory subunit B56, protein phosphatase 2A isoform c

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [555aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [540aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [485aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [524aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         26           2
 C cysteine            1.3          6           2
 D aspartate           4.0         18           2
 E glutamate           8.9         40           2
 F phenylalanine       6.2         28           2
 G glycine             2.0          9           1
 H histidine           3.1         14           2
 I isoleucine          6.2         28           2
 K lysine              8.5         38           2
 L leucine            12.5         56           2
 M methionine          2.9         13           1
 N asparagine          4.9         22           2
 P proline             6.2         28           2
 Q glutamine           3.8         17           2
 R arginine            4.0         18           1
 S serine              4.7         21           2
 T threonine           3.6         16           2
 V valine              6.5         29           2
 W tryptophan          1.3          6           1
 Y tyrosine            3.6         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma isoform of regulatory subunit B56, protein pho... 
PPP2R5C               0.988   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.986   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.920   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5C               0.919   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5D               0.828   delta isoform of regulatory subunit B56, protein phos...
PPP2R5D               0.821   delta isoform of regulatory subunit B56, protein pho...
PPP2R5D               0.820   delta isoform of regulatory subunit B56, protein pho...
PPP2R5E               0.667   epsilon isoform of regulatory subunit B56, protein ph...
PPP2R5A               0.660   protein phosphatase 2, regulatory subunit B (B56), al...
PPP2R5B               0.640   beta isoform of regulatory subunit B56, protein phosp...
PEX3                  0.010   peroxisomal biogenesis factor 3 
WDR91                 0.007   WD repeat domain 91 
DNAH10                0.007   dynein, axonemal, heavy chain 10 
UTRN                  0.006   utrophin 
ARHGEF16              0.006   Rho guanine exchange factor 16 
C10orf76              0.006   hypothetical protein LOC79591 
VWA3A                 0.005   von Willebrand factor A domain containing 3A 
C14orf43              0.005   hypothetical protein LOC91748 
C14orf43              0.005   hypothetical protein LOC91748 
DMD                   0.005   dystrophin Dp427c isoform 
DMD                   0.005   dystrophin Dp116 isoform 
DMD                   0.005   dystrophin Dp260-2 isoform 
DMD                   0.005   dystrophin Dp260-1 isoform 
DMD                   0.005   dystrophin Dp427p2 isoform 
DMD                   0.005   dystrophin Dp427p1 isoform 
DMD                   0.005   dystrophin Dp140b isoform 
DMD                   0.005   dystrophin Dp71b isoform 
DMD                   0.005   dystrophin Dp71 isoform 
DMD                   0.005   dystrophin Dp140 isoform 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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