Guide to the Human Genome
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Name: PPP2R5C Sequence: fasta or formatted (485aa) NCBI GI: 31083236
Description:

gamma isoform of regulatory subunit B56, protein phosphatase 2A isoform b

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [555aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [540aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [449aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [524aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         32           2
 C cysteine            1.4          7           2
 D aspartate           4.7         23           2
 E glutamate           8.9         43           2
 F phenylalanine       5.8         28           2
 G glycine             2.1         10           1
 H histidine           3.3         16           2
 I isoleucine          5.6         27           2
 K lysine              8.7         42           2
 L leucine            12.2         59           2
 M methionine          2.7         13           1
 N asparagine          4.5         22           2
 P proline             6.6         32           2
 Q glutamine           4.1         20           2
 R arginine            4.5         22           2
 S serine              4.7         23           2
 T threonine           3.3         16           2
 V valine              5.8         28           2
 W tryptophan          1.2          6           1
 Y tyrosine            3.3         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma isoform of regulatory subunit B56, protein pho... 
PPP2R5C               0.980   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.939   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5C               0.918   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5C               0.910   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5D               0.789   delta isoform of regulatory subunit B56, protein phos...
PPP2R5D               0.782   delta isoform of regulatory subunit B56, protein pho...
PPP2R5D               0.781   delta isoform of regulatory subunit B56, protein pho...
PPP2R5E               0.615   epsilon isoform of regulatory subunit B56, protein ph...
PPP2R5A               0.608   protein phosphatase 2, regulatory subunit B (B56), al...
PPP2R5B               0.592   beta isoform of regulatory subunit B56, protein phosp...
PPP1R10               0.009   protein phosphatase 1, regulatory subunit 10 
PEX3                  0.009   peroxisomal biogenesis factor 3 
TCHH                  0.007   trichohyalin 
BAZ2A                 0.007   bromodomain adjacent to zinc finger domain, 2A [Homo...
CCDC120               0.007   coiled-coil domain containing 120 isoform 4 
CCDC120               0.007   coiled-coil domain containing 120 isoform 2 
PKN2                  0.007   protein kinase N2 
WDR91                 0.006   WD repeat domain 91 
UTRN                  0.005   utrophin 
BAZ1A                 0.005   bromodomain adjacent to zinc finger domain, 1A isofo...
ITSN2                 0.005   intersectin 2 isoform 3 
ITSN2                 0.005   intersectin 2 isoform 1 
ITSN2                 0.005   intersectin 2 isoform 2 
ARHGEF16              0.005   Rho guanine exchange factor 16 
TBC1D10B              0.005   TBC1 domain family, member 10B 
C10orf76              0.005   hypothetical protein LOC79591 
DNAH10                0.004   dynein, axonemal, heavy chain 10 
LOC283685             0.004   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TAF3                  0.004   RNA polymerase II transcription factor TAFII140 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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