Guide to the Human Genome
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Name: LY6G6F Sequence: fasta or formatted (297aa) NCBI GI: 51242941
Description:

G6f protein

Referenced in:

Receptor Tyrosine Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         27           2
 C cysteine            3.0          9           1
 D aspartate           3.4         10           1
 E glutamate           4.4         13           2
 F phenylalanine       2.4          7           1
 G glycine             8.8         26           1
 H histidine           2.4          7           2
 I isoleucine          3.4         10           2
 K lysine              2.4          7           1
 L leucine            12.5         37           3
 M methionine          2.4          7           1
 N asparagine          2.4          7           1
 P proline             8.4         25           2
 Q glutamine           4.4         13           1
 R arginine            7.4         22           2
 S serine              8.1         24           1
 T threonine           2.7          8           2
 V valine              7.7         23           2
 W tryptophan          3.0          9           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G6f protein 
NCR2                  0.022   natural cytotoxicity triggering receptor 2 
FCRL6                 0.017   Fc receptor-like 6 
HMCN2                 0.017   PREDICTED: hemicentin 2 
HMCN2                 0.017   PREDICTED: hemicentin 2 
HMCN2                 0.017   PREDICTED: hemicentin 2 
C10orf54              0.015   platelet receptor Gi24 
IGSF9                 0.014   immunoglobulin superfamily, member 9 isoform a [Hom...
IGSF9                 0.014   immunoglobulin superfamily, member 9 isoform b [Hom...
HMCN1                 0.014   hemicentin 1 
ZDHHC20               0.014   zinc finger, DHHC-type containing 20 
FCRL3                 0.012   Fc receptor-like 3 precursor 
CD8A                  0.012   CD8 antigen alpha polypeptide isoform 1 precursor [H...
CD8A                  0.012   CD8 antigen alpha polypeptide isoform 2 precursor [H...
CD8A                  0.012   CD8 antigen alpha polypeptide isoform 1 precursor [...
IGSF8                 0.012   immunoglobulin superfamily, member 8 
LAG3                  0.012   lymphocyte-activation protein 3 precursor 
LOC100292387          0.010   PREDICTED: similar to hemicentin 2 
SLAMF6                0.010   activating NK receptor precursor 
PKD1                  0.008   polycystin 1 isoform 2 precursor 
PKD1                  0.008   polycystin 1 isoform 1 precursor 
CD84                  0.008   CD84 molecule 
C17orf63              0.008   hypothetical protein LOC55731 
C17orf63              0.008   hypothetical protein LOC55731 
ARHGAP23              0.008   Rho GTPase activating protein 23 
CEACAM1               0.008   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.008   carcinoembryonic antigen-related cell adhesion molec...
DSCAM                 0.008   Down syndrome cell adhesion molecule isoform CHD2-42...
BTN3A2                0.008   butyrophilin, subfamily 3, member A2 precursor [Homo...
BTN1A1                0.008   butyrophilin, subfamily 1, member A1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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