Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BTN1A1 Sequence: fasta or formatted (526aa) NCBI GI: 166197658
Description:

butyrophilin, subfamily 1, member A1

Referenced in:

Butyrophilin Family
Mammary Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         33           2
 C cysteine            1.9         10           1
 D aspartate           5.5         29           2
 E glutamate           8.2         43           2
 F phenylalanine       4.0         21           2
 G glycine             6.7         35           1
 H histidine           1.7          9           1
 I isoleucine          4.8         25           2
 K lysine              4.4         23           2
 L leucine            10.3         54           3
 M methionine          1.5          8           1
 N asparagine          2.7         14           1
 P proline             8.0         42           2
 Q glutamine           2.7         14           1
 R arginine            6.8         36           2
 S serine              7.8         41           2
 T threonine           5.1         27           1
 V valine              7.0         37           2
 W tryptophan          2.3         12           1
 Y tyrosine            2.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   butyrophilin, subfamily 1, member A1 
BTN2A2                0.406   butyrophilin, subfamily 2, member A2 isoform a 
BTN3A3                0.400   butyrophilin, subfamily 3, member A3 isoform a 
BTN2A1                0.396   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTN3A1                0.384   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN3A3                0.378   butyrophilin, subfamily 3, member A3 isoform b [Homo...
BTN3A1                0.311   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTNL9                 0.297   butyrophilin-like 9 
BTN2A2                0.283   butyrophilin, subfamily 2, member A2 isoform b [Homo...
BTNL8                 0.255   butyrophilin-like 8 isoform 2 precursor 
BTNL3                 0.250   butyrophilin-like 3 
BTN2A1                0.219   butyrophilin, subfamily 2, member A1 isoform 2 precu...
BTN3A2                0.213   butyrophilin, subfamily 3, member A2 precursor [Homo...
BTN3A1                0.213   butyrophilin, subfamily 3, member A1 isoform b [Homo...
BTN3A1                0.213   butyrophilin, subfamily 3, member A1 isoform d [Hom...
ERMAP                 0.179   erythroblast membrane-associated protein precursor [...
ERMAP                 0.179   erythroblast membrane-associated protein precursor [...
TRIM27                0.174   ret finger protein 
BTNL2                 0.167   butyrophilin-like 2 
TRIM11                0.166   tripartite motif-containing 11 
BTNL8                 0.151   butyrophilin-like 8 isoform 3 precursor 
BTNL8                 0.151   butyrophilin-like 8 isoform 5 
TRIM21                0.148   tripartite motif protein 21 
TRIM39                0.146   tripartite motif-containing 39 isoform 2 
TRIM39                0.146   tripartite motif-containing 39 isoform 1 
MEFV                  0.142   Mediterranean fever protein 
TRIM58                0.140   tripartite motif-containing 58 
BTNL8                 0.137   butyrophilin-like 8 isoform 4 precursor 
BTNL8                 0.137   butyrophilin-like 8 isoform 1 precursor 
TRIM68                0.137   ring finger protein 137 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press