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Search of human proteins with 49472828
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|49472828 natural killer cell-specific antigen KLIP1 [Homo
sapiens]
(350 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|49472828 natural killer cell-specific antigen KLIP1 [Homo sap... 698 0.0
gi|10092643 Yip1 domain family, member 1 [Homo sapiens] 39 0.007
gi|13128976 Yip1 domain family, member 2 [Homo sapiens] 36 0.045
gi|56711324 HAUS augmin-like complex, subunit 3 [Homo sapiens] 33 0.38
gi|9966781 claudin 2 [Homo sapiens] 32 0.65
gi|14150076 Yip1 domain family, member 4 [Homo sapiens] 32 1.1
gi|4557511 death-associated protein kinase 3 [Homo sapiens] 32 1.1
gi|156071452 nardilysin isoform b [Homo sapiens] 31 1.4
gi|156071450 nardilysin isoform a [Homo sapiens] 31 1.4
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 31 1.4
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 31 1.9
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 31 1.9
gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens] 30 2.5
gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens] 30 2.5
gi|239753283 PREDICTED: hypothetical protein [Homo sapiens] 30 4.2
gi|6912550 olfactory receptor, family 10, subfamily J, member 1 ... 30 4.2
gi|21361468 nucleolar protein 11 [Homo sapiens] 30 4.2
gi|53793690 olfactory receptor, family 2, subfamily T, member 6 ... 30 4.2
gi|160420295 hypothetical protein LOC85459 [Homo sapiens] 30 4.2
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 29 5.5
gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens] 29 5.5
gi|31543091 MAK16 homolog [Homo sapiens] 29 5.5
gi|13540539 olfactory receptor, family 51, subfamily E, member 2... 29 5.5
gi|49472835 bridging integrator 2 [Homo sapiens] 29 5.5
gi|55741661 hypothetical protein LOC57653 [Homo sapiens] 29 7.2
gi|4827008 solute carrier family 15 (oligopeptide transporter), ... 29 7.2
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 29 7.2
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 29 7.2
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 29 7.2
gi|110347463 human immunodeficiency virus type I enhancer bindin... 29 7.2
>gi|49472828 natural killer cell-specific antigen KLIP1 [Homo
sapiens]
Length = 350
Score = 698 bits (1801), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MATTAAPAGGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREE 60
MATTAAPAGGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREE
Sbjct: 1 MATTAAPAGGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREE 60
Query: 61 EVDADAADAAAAEEEDGEFLGMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRP 120
EVDADAADAAAAEEEDGEFLGMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRP
Sbjct: 61 EVDADAADAAAAEEEDGEFLGMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRP 120
Query: 121 YFDVEPAQVRSRLLESMIPIKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIRE 180
YFDVEPAQVRSRLLESMIPIKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIRE
Sbjct: 121 YFDVEPAQVRSRLLESMIPIKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIRE 180
Query: 181 GTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITYNIH 240
GTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITYNIH
Sbjct: 181 GTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITYNIH 240
Query: 241 LHALFYLFWLLVGGLSTLRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYLHFAYHKVV 300
LHALFYLFWLLVGGLSTLRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYLHFAYHKVV
Sbjct: 241 LHALFYLFWLLVGGLSTLRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYLHFAYHKVV 300
Query: 301 EGILDTLEGPNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH 350
EGILDTLEGPNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH
Sbjct: 301 EGILDTLEGPNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH 350
>gi|10092643 Yip1 domain family, member 1 [Homo sapiens]
Length = 306
Score = 38.9 bits (89), Expect = 0.007
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 55/286 (19%)
Query: 30 GSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGEFLGMKGF-KGQ 88
G+A + D + + ED GE + + + EED E LG K +
Sbjct: 13 GNAATSLTANPDATTVNIEDPGETPKH-------QPGSPRGSGREEDDELLGNDDSDKTE 65
Query: 89 LSRQVADQMWQAGKRQASRAFSLYANIDILRPYFDVEPAQVRSRLLESMIPIKMVNFPQ- 147
L AG++++S ++ + + +FDV+ QV R+ S++PI NF +
Sbjct: 66 LL---------AGQKKSSPFWTF----EYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRL 112
Query: 148 --KIAGELYGPLMLVFTLV-AILLHGMKTSDTI---------IREGTLMGTAIGTCFGY- 194
+ +LYGP + TLV AI + G ++ I + E + A + Y
Sbjct: 113 YIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYA 172
Query: 195 WLGVSSFIYFLAYLCNAQI------TMLQMLALLGYGLFGHCIVLFITYNIHLHALFYLF 248
WL + FL + N+++ + L+++ + GY LF + I I + I A+ ++
Sbjct: 173 WLVPLALWGFLMWR-NSKVMNIVSYSFLEIVCVYGYSLFIY-IPTAILWIIPQKAVRWIL 230
Query: 249 WLLVGGLSTLRMVAVLVSRTVGPTQR-------LLLCGTLAALHML 287
++ G+S L++ T P R L T+ LHML
Sbjct: 231 VMIALGIS-----GSLLAMTFWPAVREDNRRVALATIVTIVLLHML 271
>gi|13128976 Yip1 domain family, member 2 [Homo sapiens]
Length = 316
Score = 36.2 bits (82), Expect = 0.045
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 121 YFDVEPAQVRSRLLESMIPIKMVNFPQ---KIAGELYGPLMLVFTLVAI--------LLH 169
+FDV+ +QV R+ S++P NF + + +LYGP + TL + L+
Sbjct: 86 FFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVL 145
Query: 170 GMKTSDTI-----IREGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQ-----ITMLQML 219
+ +I + T+ G +I C+ WL + FL + Q T L+ +
Sbjct: 146 AQRRDPSIHYSPQFHKVTVAGISI-YCYA-WLVPLALWGFLRWRKGVQERMGPYTFLETV 203
Query: 220 ALLGYGLFGHCIVLFITYNIHLHALFYLFWLLVGGLSTLRMVAVL--VSRTVGPTQRLLL 277
+ GY LF I + + + I + L +LF L GLS +V L V R +L
Sbjct: 204 CIYGYSLFVF-IPMVVLWLIPVPWLQWLFGALALGLSAAGLVFTLWPVVREDTRLVATVL 262
Query: 278 CGTLAALHMLFLL 290
+ LH L +
Sbjct: 263 LSVVVLLHALLAM 275
>gi|56711324 HAUS augmin-like complex, subunit 3 [Homo sapiens]
Length = 603
Score = 33.1 bits (74), Expect = 0.38
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 23 EENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGEFLGM 82
EE++ S +D EN+D S ++ +L +E A E+ + L M
Sbjct: 294 EESLHSLTSKAVDKENLDAKISSLTSEI----MKLEKEVTQIKDRSLPAVVRENAQLLNM 349
Query: 83 KGFKGQLSRQVADQMWQAGKRQ--ASRAFSLYANIDILRPYFDVEPAQVRS--RLLESMI 138
KG Q+A Q + +++ ++ A+ ++L+ +++E + R R LE+++
Sbjct: 350 PVVKGDFDLQIAKQDYYTARQELVLNQLIKQKASFELLQLSYEIELRKHRDIYRQLENLV 409
>gi|9966781 claudin 2 [Homo sapiens]
Length = 230
Score = 32.3 bits (72), Expect = 0.65
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 142 MVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIREGTLMGTAIGTCFGYWL 196
M + ++ G + G L L+ TLVA+LL KTS + G + TA+G G W+
Sbjct: 1 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYV---GASIVTAVGFSKGLWM 52
>gi|14150076 Yip1 domain family, member 4 [Homo sapiens]
Length = 244
Score = 31.6 bits (70), Expect = 1.1
Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 36/182 (19%)
Query: 123 DVEPAQVRSRLLESMIPIKMVNFPQKIAGE---LYGPLMLVFTLVAILLHGMKTSDTIIR 179
D++ + ++ ++P+ + F +++ + +GPL +V I L+G
Sbjct: 82 DIDLKDIYYKIRCVLMPMPSLGFNRQVVRDNPDFWGPLAVVLFFSMISLYGQFR------ 135
Query: 180 EGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCI---VLFIT 236
+ W+ S I+ LA + ++ Q+L ++GY L + VL +
Sbjct: 136 -------VVSWIITIWIFGSLTIFLLARVLGGEVAYGQVLGVIGYSLLPLIVIAPVLLVV 188
Query: 237 YNIH----LHALFYLFWLLVGGLSTLRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYL 292
+ L LF +FW S +LV + LL ++ +FLLY+
Sbjct: 189 GSFEVVSTLIKLFGVFWAAYSAAS------LLVGEEFKTKKPLL-------IYPIFLLYI 235
Query: 293 HF 294
+F
Sbjct: 236 YF 237
>gi|4557511 death-associated protein kinase 3 [Homo sapiens]
Length = 454
Score = 31.6 bits (70), Expect = 1.1
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 48 EDMGELHQRLREEEVDADAADAAAAEEEDGEFLGMKGFKGQLSR 91
+ +G+ +RLR+E + +A A EE G LG G K + SR
Sbjct: 372 DSLGQDLRRLRQELLKTEALKRQAQEEAKGALLGTSGLKRRFSR 415
>gi|156071452 nardilysin isoform b [Homo sapiens]
Length = 1151
Score = 31.2 bits (69), Expect = 1.4
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 26 IQGGGSAVI--DMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGE 78
+Q G A++ D+ NM+ +G++ +D E + + EEE D D A E++D E
Sbjct: 118 LQNGLQALLISDLSNMEGKTGNTTDD--EEEEEVEEEEEDDDEDSGAEIEDDDEE 170
>gi|156071450 nardilysin isoform a [Homo sapiens]
Length = 1219
Score = 31.2 bits (69), Expect = 1.4
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 26 IQGGGSAVI--DMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGE 78
+Q G A++ D+ NM+ +G++ +D E + + EEE D D A E++D E
Sbjct: 118 LQNGLQALLISDLSNMEGKTGNTTDD--EEEEEVEEEEEDDDEDSGAEIEDDDEE 170
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 1 MATTAAPAGGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREE 60
+A + P G + G G FEE+ G D + + G+ ED G E
Sbjct: 10 VARSPGPDGHPQVGPADPAGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEG------ASE 63
Query: 61 EVDADAADAAAAEEEDGE-FLGMKGFKGQL 89
E D + + E+DGE L + G +G+L
Sbjct: 64 EEDLEDRSGSEDSEDDGETLLEVAGTQGKL 93
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 30.8 bits (68), Expect = 1.9
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 9/79 (11%)
Query: 9 GGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAAD 68
GG+ G G GG GGG A E M + S S GE ++E + D +
Sbjct: 61 GGSGGGGGGGGGGV-----GGGEA----ETMSEPSPESASQAGEDEDEEEDDEEEEDESS 111
Query: 69 AAAAEEEDGEFLGMKGFKG 87
++ EE+ + G G
Sbjct: 112 SSGGGEEESSAESLVGSSG 130
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 30.8 bits (68), Expect = 1.9
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 9/79 (11%)
Query: 9 GGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAAD 68
GG+ G G GG GGG A E M + S S GE ++E + D +
Sbjct: 61 GGSGGGGGGGGGGV-----GGGEA----ETMSEPSPESASQAGEDEDEEEDDEEEEDESS 111
Query: 69 AAAAEEEDGEFLGMKGFKG 87
++ EE+ + G G
Sbjct: 112 SSGGGEEESSAESLVGSSG 130
>gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]
Length = 847
Score = 30.4 bits (67), Expect = 2.5
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
Query: 6 APAGGARNGAGP--EWG---------GFEENIQGGGSAVIDMENMDDTSGSSFEDMGELH 54
A AGG R GAG EW G ++ GGG + ++T S D+ EL
Sbjct: 123 AGAGGRRGGAGAPREWNVAYALGSATGDDDEDDGGGPRLRGAA--EETRDS---DLSELS 177
Query: 55 QRLREEEVDADAADAAAAEEEDGEFLGMKGFKGQ 88
E D A DAA+ ++ G +G +GQ
Sbjct: 178 DTDPLSEPDPPARDAASPHQDGAPGPGPRGGRGQ 211
>gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens]
Length = 847
Score = 30.4 bits (67), Expect = 2.5
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
Query: 6 APAGGARNGAGP--EWG---------GFEENIQGGGSAVIDMENMDDTSGSSFEDMGELH 54
A AGG R GAG EW G ++ GGG + ++T S D+ EL
Sbjct: 123 AGAGGRRGGAGAPREWNVAYALGSATGDDDEDDGGGPRLRGAA--EETRDS---DLSELS 177
Query: 55 QRLREEEVDADAADAAAAEEEDGEFLGMKGFKGQ 88
E D A DAA+ ++ G +G +GQ
Sbjct: 178 DTDPLSEPDPPARDAASPHQDGAPGPGPRGGRGQ 211
>gi|239753283 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 29.6 bits (65), Expect = 4.2
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 84 GFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRPYFDVEPAQVRSRLLESMIPIKMV 143
G G+L RQ + AG R A SL A++ R ++ V PAQ S +S + +
Sbjct: 27 GLAGRLGRQCVSRQAAAGSRGPLLAGSLLAHLAEQRQWWLVPPAQPPS-YRQSPKSMSLR 85
Query: 144 NFPQK 148
N PQ+
Sbjct: 86 NLPQR 90
>gi|6912550 olfactory receptor, family 10, subfamily J, member 1
[Homo sapiens]
Length = 320
Score = 29.6 bits (65), Expect = 4.2
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 212 QITMLQM-LALLGYGLFGHCIVL-FITYNIHLHALFYLFWLLVGGLSTLRMVAVL---VS 266
QIT+ + LAL L G+ I++ I ++HLH Y F ++ T+ + +L +S
Sbjct: 35 QITLFGVFLALYILTLAGNIIIVTIIRIDLHLHTPMYFFLSMLSTSETVYTLVILPRMLS 94
Query: 267 RTVGPTQRLLLCGTLAALHMLFLL 290
VG +Q + L G A M F +
Sbjct: 95 SLVGMSQPMSLAG--CATQMFFFV 116
>gi|21361468 nucleolar protein 11 [Homo sapiens]
Length = 719
Score = 29.6 bits (65), Expect = 4.2
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 287 LFLLYLHFAYHKVVEGILDTLEGPNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVT 346
LFL YL+F Y K E TL G + P + ++ D +L A V+ AK + +
Sbjct: 615 LFLKYLYFLYLKCSENATMTLPGIHPPTLNQI-MDWICLLLDANFTVVVMMPEAKRLLIN 673
Query: 347 L 347
L
Sbjct: 674 L 674
>gi|53793690 olfactory receptor, family 2, subfamily T, member 6
[Homo sapiens]
Length = 308
Score = 29.6 bits (65), Expect = 4.2
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 25/101 (24%)
Query: 172 KTSDTIIREGTLMGTAI-GTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHC 230
+ ++T+ R TLMG C G++ GV ++F+A + N
Sbjct: 3 ENNETLTRGFTLMGLFTHNKCSGFFFGVICAVFFMAMIANG------------------V 44
Query: 231 IVLFITYNIHLHALFYLFWLLVGGLSTLRMVAVLVSRTVGP 271
++ I + HLH Y LS L ++ L T+ P
Sbjct: 45 MIFLINIDPHLHTPMYFL------LSHLSVIDTLYISTIVP 79
>gi|160420295 hypothetical protein LOC85459 [Homo sapiens]
Length = 2601
Score = 29.6 bits (65), Expect = 4.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 36 MENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEE 75
++N++ +S MGE H++ +E E D DA AAE +
Sbjct: 79 IQNLEKLYLASLRSMGEGHRQAKENEPDLDALAQRAAERK 118
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 29.3 bits (64), Expect = 5.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 310 PNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH 350
P+ +RV +++ LP RLP++ + KA + L SH
Sbjct: 257 PSTKTEERVGKEVVGTLPGLRLPSSTAHLETKATILPLPSH 297
>gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens]
Length = 1166
Score = 29.3 bits (64), Expect = 5.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 310 PNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH 350
P+ +RV +++ LP RLP++ + KA + L SH
Sbjct: 257 PSTKTEERVGKEVVGTLPGLRLPSSTAHLETKATILPLPSH 297
>gi|31543091 MAK16 homolog [Homo sapiens]
Length = 300
Score = 29.3 bits (64), Expect = 5.5
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 35 DMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGEFLGMKGFKGQLSRQVA 94
D ++ +D F + GE+ + + D D DA++ E++DG+ + + LS +
Sbjct: 208 DDDDEEDVGKREFVEDGEVDESDISDFEDMDKLDASSDEDQDGKSSSEEEEEKALSAKHK 267
Query: 95 DQMWQAGKRQASRAF 109
+M G Q RA+
Sbjct: 268 GKMPLRGPLQRKRAY 282
>gi|13540539 olfactory receptor, family 51, subfamily E, member 2
[Homo sapiens]
Length = 320
Score = 29.3 bits (64), Expect = 5.5
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 218 MLALLGYGLFGHCIVLFITYNIH-LHALFYLFWLLVG----GLSTLRMVAVL 264
+L++ +FG+CIV+FI LHA YLF ++ LST M +L
Sbjct: 30 LLSMYVVAMFGNCIVVFIVRTERSLHAPMYLFLCMLAAIDLALSTSTMPKIL 81
>gi|49472835 bridging integrator 2 [Homo sapiens]
Length = 565
Score = 29.3 bits (64), Expect = 5.5
Identities = 10/29 (34%), Positives = 22/29 (75%)
Query: 48 EDMGELHQRLREEEVDADAADAAAAEEED 76
ED E+ + L EEE++ + ++A+++EE++
Sbjct: 307 EDNSEIKELLEEEEIEKEGSEASSSEEDE 335
>gi|55741661 hypothetical protein LOC57653 [Homo sapiens]
Length = 1646
Score = 28.9 bits (63), Expect = 7.2
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 23 EENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGE 78
EEN++G G + E D+ E+ +L + E+E + + EEED E
Sbjct: 893 EENVKGQGEKKEESEEEDEKEEEEEEE--KLEEEKEEKEAQEEQESLSVGEEEDKE 946
>gi|4827008 solute carrier family 15 (oligopeptide transporter),
member 1 [Homo sapiens]
Length = 708
Score = 28.9 bits (63), Expect = 7.2
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 80 LGMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRPYFDVEPAQVRSRLLESMIP 139
LG G K +S DQ + ++Q +R FS++ Y + + S ++ M+
Sbjct: 134 LGTGGIKPCVSAFGGDQFEEGQEKQRNRFFSIF--------YLAINAGSLLSTIITPMLR 185
Query: 140 IKMVNFPQK-----IAGELYGPLMLVFTLVAILLHGMKTSDTIIREGTLMGTAIGTCFGY 194
++ K +A + LM V +V +L GM +G +MG + C G+
Sbjct: 186 VQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKK--FKPQGNIMG-KVAKCIGF 242
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 28.9 bits (63), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 48 EDMGELHQRLREEEVDADAADAAAAEEED 76
EDM +R EEE+ A+A +A EEED
Sbjct: 1215 EDMPLPEERKEEEEMQAEAEEAEEGEEED 1243
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 28.9 bits (63), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 48 EDMGELHQRLREEEVDADAADAAAAEEED 76
EDM +R EEE+ A+A +A EEED
Sbjct: 1215 EDMPLPEERKEEEEMQAEAEEAEEGEEED 1243
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 28.9 bits (63), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 48 EDMGELHQRLREEEVDADAADAAAAEEED 76
EDM +R EEE+ A+A +A EEED
Sbjct: 1215 EDMPLPEERKEEEEMQAEAEEAEEGEEED 1243
>gi|110347463 human immunodeficiency virus type I enhancer binding
protein 2 [Homo sapiens]
Length = 2446
Score = 28.9 bits (63), Expect = 7.2
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 34 IDMENMDDTSGSSFEDMGELHQRLREEEVDADAAD--AAAAEEEDGE 78
+ M ++DDT E++ +LH+ + + + + D + AEE DGE
Sbjct: 1860 VSMTSVDDTETEEAENLEDLHKAAEKHSMSSISTDHQFSDAEESDGE 1906
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.139 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,442,209
Number of Sequences: 37866
Number of extensions: 526313
Number of successful extensions: 2467
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 2439
Number of HSP's gapped (non-prelim): 54
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.