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Search of human proteins with 4826694
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4826694 integral membrane protein DGCR2 [Homo sapiens]
(550 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4826694 integral membrane protein DGCR2 [Homo sapiens] 1175 0.0
gi|119709832 low density lipoprotein receptor-related protein 5 ... 65 1e-10
gi|148727288 low density lipoprotein receptor-related protein 6 ... 63 8e-10
gi|144446030 lymphocyte antigen 75 [Homo sapiens] 56 1e-07
gi|61744471 low density lipoprotein receptor-related protein 8 i... 51 2e-06
gi|65301119 low density lipoprotein receptor-related protein 8 i... 51 2e-06
gi|28557796 low density lipoprotein receptor class A domain cont... 51 3e-06
gi|4504975 low density lipoprotein receptor precursor [Homo sapi... 50 4e-06
gi|11415040 matriptase [Homo sapiens] 50 5e-06
gi|46410931 attractin-like 1 [Homo sapiens] 50 7e-06
gi|126012562 low density lipoprotein-related protein 1 [Homo sap... 48 2e-05
gi|29244926 corin [Homo sapiens] 48 2e-05
gi|65301164 very low density lipoprotein receptor isoform b [Hom... 48 2e-05
gi|65301167 very low density lipoprotein receptor isoform a [Hom... 48 2e-05
gi|157384998 low density lipoprotein receptor-related protein 4 ... 48 3e-05
gi|126012573 low density lipoprotein-related protein 2 [Homo sap... 48 3e-05
gi|134031945 SCO-spondin [Homo sapiens] 47 5e-05
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 47 6e-05
gi|61744467 low density lipoprotein receptor-related protein 8 i... 45 2e-04
gi|66082554 low density lipoprotein receptor-related protein 8 i... 45 2e-04
gi|239755250 PREDICTED: chromosome 10 open reading frame 112 [Ho... 45 2e-04
gi|239749752 PREDICTED: chromosome 10 open reading frame 112 [Ho... 45 2e-04
gi|239744011 PREDICTED: chromosome 10 open reading frame 112 [Ho... 45 2e-04
gi|93102379 low density lipoprotein-related protein 1B precursor... 45 2e-04
gi|167555125 low density lipoprotein receptor-related protein 3 ... 44 4e-04
gi|4507157 sortilin-related receptor containing LDLR class A rep... 44 4e-04
gi|7706111 8D6 antigen [Homo sapiens] 44 4e-04
gi|55953106 phospholipase A2 receptor 1 isoform 2 precursor [Hom... 43 7e-04
gi|55953104 phospholipase A2 receptor 1 isoform 1 precursor [Hom... 43 7e-04
gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens] 43 7e-04
>gi|4826694 integral membrane protein DGCR2 [Homo sapiens]
Length = 550
Score = 1175 bits (3040), Expect = 0.0
Identities = 550/550 (100%), Positives = 550/550 (100%)
Query: 1 MVPKADSGAFLLLFLLVLTVTEPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDE 60
MVPKADSGAFLLLFLLVLTVTEPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDE
Sbjct: 1 MVPKADSGAFLLLFLLVLTVTEPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDE 60
Query: 61 SDEANCPEVTGEVRPHHGKEAVDPRQGRARGGDPSHFHAVNVAQPVRFSSFLGKCPTGWH 120
SDEANCPEVTGEVRPHHGKEAVDPRQGRARGGDPSHFHAVNVAQPVRFSSFLGKCPTGWH
Sbjct: 61 SDEANCPEVTGEVRPHHGKEAVDPRQGRARGGDPSHFHAVNVAQPVRFSSFLGKCPTGWH 120
Query: 121 HYEGTASCYRVYLSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEWDQPERSFGWKD 180
HYEGTASCYRVYLSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEWDQPERSFGWKD
Sbjct: 121 HYEGTASCYRVYLSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEWDQPERSFGWKD 180
Query: 181 QRKLWVGYQYVITGRNRSLEGRWEVAFKGSSEVFLPPDPIFASAMSENDNVFCAQLQCFH 240
QRKLWVGYQYVITGRNRSLEGRWEVAFKGSSEVFLPPDPIFASAMSENDNVFCAQLQCFH
Sbjct: 181 QRKLWVGYQYVITGRNRSLEGRWEVAFKGSSEVFLPPDPIFASAMSENDNVFCAQLQCFH 240
Query: 241 FPTLRHHDLHSWHAESCYEKSSFLCKRSQTCVDIKDNVVDEGFYFTPKGDDPCLSCTCHG 300
FPTLRHHDLHSWHAESCYEKSSFLCKRSQTCVDIKDNVVDEGFYFTPKGDDPCLSCTCHG
Sbjct: 241 FPTLRHHDLHSWHAESCYEKSSFLCKRSQTCVDIKDNVVDEGFYFTPKGDDPCLSCTCHG 300
Query: 301 GEPEMCVAALCERPQGCQQYRKDPKECCKFMCLDPDGNSLFDSMASGMRLVVSCISSFLI 360
GEPEMCVAALCERPQGCQQYRKDPKECCKFMCLDPDGNSLFDSMASGMRLVVSCISSFLI
Sbjct: 301 GEPEMCVAALCERPQGCQQYRKDPKECCKFMCLDPDGNSLFDSMASGMRLVVSCISSFLI 360
Query: 361 LSLLLFMVHRLRQRRRERIESLIGANLHHFNLGRRIPGFDYGPDGFGTGLTPLHLSDDGE 420
LSLLLFMVHRLRQRRRERIESLIGANLHHFNLGRRIPGFDYGPDGFGTGLTPLHLSDDGE
Sbjct: 361 LSLLLFMVHRLRQRRRERIESLIGANLHHFNLGRRIPGFDYGPDGFGTGLTPLHLSDDGE 420
Query: 421 GGTFHFHDPPPPYTAYKYPDIGQPDDPPPPYEASIHPDSVFYDPADDDAFEPVEVSLPAP 480
GGTFHFHDPPPPYTAYKYPDIGQPDDPPPPYEASIHPDSVFYDPADDDAFEPVEVSLPAP
Sbjct: 421 GGTFHFHDPPPPYTAYKYPDIGQPDDPPPPYEASIHPDSVFYDPADDDAFEPVEVSLPAP 480
Query: 481 GDGGSEGALLRRLEQPLPTAGASLADLEDSADSSSALLVPPDPAQSGSTPAAEALPGGGR 540
GDGGSEGALLRRLEQPLPTAGASLADLEDSADSSSALLVPPDPAQSGSTPAAEALPGGGR
Sbjct: 481 GDGGSEGALLRRLEQPLPTAGASLADLEDSADSSSALLVPPDPAQSGSTPAAEALPGGGR 540
Query: 541 HSRSSLNTVV 550
HSRSSLNTVV
Sbjct: 541 HSRSSLNTVV 550
>gi|119709832 low density lipoprotein receptor-related protein 5 [Homo
sapiens]
Length = 1615
Score = 65.5 bits (158), Expect = 1e-10
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 3 PKADSGAFLLLFLLVLTVTEPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESD 62
P+ L+L +LT EP C+P QFAC +G I CIP W+CDG+ C+D+SD
Sbjct: 1236 PRCSCPVHLVLLQNLLTCGEPPT----CSPDQFACATGEIDCIPGAWRCDGFPECDDQSD 1291
Query: 63 EANCPEVTGEVRPHHGKEAVDPR 85
E CP + P + VD R
Sbjct: 1292 EEGCPVCSAAQFPCARGQCVDLR 1314
Score = 40.0 bits (92), Expect = 0.006
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
C P QF C SG QC+ + QCD + C D SDE C E+T
Sbjct: 1336 CLPNQFRCASG--QCVLIKQQCDSFPDCIDGSDELMC-EIT 1373
>gi|148727288 low density lipoprotein receptor-related protein 6 [Homo
sapiens]
Length = 1613
Score = 62.8 bits (151), Expect = 8e-10
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
C+P QF C +G I CIP+ W+CDG+ CED SDE NCP
Sbjct: 1249 CSPQQFTCFTGEIDCIPVAWRCDGFTECEDHSDELNCP 1286
Score = 33.9 bits (76), Expect = 0.40
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 27 ELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
E+ C QF C +G QCI +CD C D+SDE +C
Sbjct: 1323 EVLCLIDQFRCANG--QCIGKHKKCDHNVDCSDKSDELDC 1360
>gi|144446030 lymphocyte antigen 75 [Homo sapiens]
Length = 1722
Score = 55.8 bits (133), Expect = 1e-07
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 115 CPTGWHHYEGTASCYRVY-----LSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEW 169
CP GW + + SCY+V+ + N+ +A + CQ L L++FS E++ L
Sbjct: 643 CPEGWQSFPASLSCYKVFHAERIVRKRNWEEAERFCQALGAHLSSFSHVDEIKEFLHFLT 702
Query: 170 DQPERSFGWKDQRKLWVGYQYVITGRNRSLEGRWEVAFKGSSEVFLPPDPIFASAMSEND 229
DQ + Q LW+G + R+ L+G W+ + + + P+ + D
Sbjct: 703 DQ------FSGQHWLWIG----LNKRSPDLQGSWQWSDRTPVSTIIMPNEF----QQDYD 748
Query: 230 NVFCAQLQCFHFPTLRHHDLHSWHAESCYEKSSFLCKRSQTC 271
CA ++ FH P R WH Y+ F+ R C
Sbjct: 749 IRDCAAVKVFHRPWRR-----GWH---FYDDREFIYLRPFAC 782
>gi|61744471 low density lipoprotein receptor-related protein 8
isoform 1 precursor [Homo sapiens]
Length = 963
Score = 51.2 bits (121), Expect = 2e-06
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
P QFACRSG +C+ L W+CDG C+D+SDEA+CP
Sbjct: 256 PAACATASQFACRSG--ECVHLGWRCDGDRDCKDKSDEADCP 295
Score = 45.1 bits (105), Expect = 2e-04
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 15/75 (20%)
Query: 9 AFLLLFLLVLTV---------TEPLR----PELRCNPGQFACRSGTIQCIPLPWQCDGWA 55
A LLL LL+L + +PL P C QF CR+ +CIP W+CD
Sbjct: 13 ALLLLLLLLLLLQLQHLAAAAADPLLGGQGPAKDCEKDQFQCRNE--RCIPSVWRCDEDD 70
Query: 56 TCEDESDEANCPEVT 70
C D SDE +CP+ T
Sbjct: 71 DCLDHSDEDDCPKKT 85
Score = 39.3 bits (90), Expect = 0.009
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C + +C + +C+P W+CDG CE +DEA C
Sbjct: 127 CPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGC 163
Score = 37.7 bits (86), Expect = 0.027
Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 30 CNPGQFACRS-GTIQCIPLPWQCDGWATCEDESDEA 64
C P +F C G CIP W CD CED SDEA
Sbjct: 206 CGPREFRCGGDGGGACIPERWVCDRQFDCEDRSDEA 241
Score = 35.4 bits (80), Expect = 0.14
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
P+ C F C +G CI W+CDG C D SDE+
Sbjct: 82 PKKTCADSDFTCDNG--HCIHERWKCDGEEECPDGSDES 118
Score = 33.1 bits (74), Expect = 0.68
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 14/64 (21%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHGKEAVDPRQGRA 89
C P +F C G C+ + CDG C D SDE C + A PR+ R
Sbjct: 167 CAPHEFQC--GNRSCLAAVFVCDGDDDCGDGSDERGCAD-----------PACGPREFRC 213
Query: 90 RGGD 93
GGD
Sbjct: 214 -GGD 216
Score = 30.0 bits (66), Expect = 5.7
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHG 78
C +F C GT C+ C+ C D SDEA C + E ++G
Sbjct: 299 CRGDEFQCGDGT--CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHNNG 345
>gi|65301119 low density lipoprotein receptor-related protein 8
isoform 4 precursor [Homo sapiens]
Length = 904
Score = 51.2 bits (121), Expect = 2e-06
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
P QFACRSG +C+ L W+CDG C+D+SDEA+CP
Sbjct: 256 PAACATASQFACRSG--ECVHLGWRCDGDRDCKDKSDEADCP 295
Score = 45.1 bits (105), Expect = 2e-04
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 15/75 (20%)
Query: 9 AFLLLFLLVLTV---------TEPLR----PELRCNPGQFACRSGTIQCIPLPWQCDGWA 55
A LLL LL+L + +PL P C QF CR+ +CIP W+CD
Sbjct: 13 ALLLLLLLLLLLQLQHLAAAAADPLLGGQGPAKDCEKDQFQCRNE--RCIPSVWRCDEDD 70
Query: 56 TCEDESDEANCPEVT 70
C D SDE +CP+ T
Sbjct: 71 DCLDHSDEDDCPKKT 85
Score = 39.3 bits (90), Expect = 0.009
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C + +C + +C+P W+CDG CE +DEA C
Sbjct: 127 CPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGC 163
Score = 37.7 bits (86), Expect = 0.027
Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 30 CNPGQFACRS-GTIQCIPLPWQCDGWATCEDESDEA 64
C P +F C G CIP W CD CED SDEA
Sbjct: 206 CGPREFRCGGDGGGACIPERWVCDRQFDCEDRSDEA 241
Score = 35.4 bits (80), Expect = 0.14
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
P+ C F C +G CI W+CDG C D SDE+
Sbjct: 82 PKKTCADSDFTCDNG--HCIHERWKCDGEEECPDGSDES 118
Score = 33.1 bits (74), Expect = 0.68
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 14/64 (21%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHGKEAVDPRQGRA 89
C P +F C G C+ + CDG C D SDE C + A PR+ R
Sbjct: 167 CAPHEFQC--GNRSCLAAVFVCDGDDDCGDGSDERGCAD-----------PACGPREFRC 213
Query: 90 RGGD 93
GGD
Sbjct: 214 -GGD 216
Score = 30.0 bits (66), Expect = 5.7
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHG 78
C +F C GT C+ C+ C D SDEA C + E ++G
Sbjct: 299 CRGDEFQCGDGT--CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHNNG 345
>gi|28557796 low density lipoprotein receptor class A domain
containing 3 [Homo sapiens]
Length = 345
Score = 50.8 bits (120), Expect = 3e-06
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 30 CN-PGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRP 75
CN PG F C +G +CIP WQCDG C D+SDE CP+ + P
Sbjct: 29 CNIPGNFMCSNG--RCIPGAWQCDGLPDCFDKSDEKECPKAKSKCGP 73
Score = 39.3 bits (90), Expect = 0.009
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
+C P F C SG I CI ++C+G+ C D SDE NC
Sbjct: 70 KCGPTFFPCASG-IHCIIGRFRCNGFEDCPDGSDEENC 106
Score = 36.2 bits (82), Expect = 0.080
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 28 LRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
L C+ ++ C++G CI + CDG C+D SDE +C
Sbjct: 111 LLCSTARYHCKNGL--CIDKSFICDGQNNCQDNSDEESC 147
>gi|4504975 low density lipoprotein receptor precursor [Homo
sapiens]
Length = 860
Score = 50.4 bits (119), Expect = 4e-06
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT---GEVRPHHGK 79
C G F+C +CIP W+CDG C++ SDE CP T E R H GK
Sbjct: 68 CKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGK 120
Score = 44.3 bits (103), Expect = 3e-04
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
C+ +F C SG +CI W+CDG C+D+SDE NC T
Sbjct: 197 CSAFEFHCLSG--ECIHSSWRCDGGPDCKDKSDEENCAVAT 235
Score = 43.5 bits (101), Expect = 5e-04
Identities = 20/38 (52%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
P L C P F C S T CIP W CD CED SDE
Sbjct: 144 PVLTCGPASFQCNSST--CIPQLWACDNDPDCEDGSDE 179
Score = 41.6 bits (96), Expect = 0.002
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA--NCPEVT 70
RC +F C+ G +CI W CDG A C+D SDE+ C VT
Sbjct: 26 RCERNEFQCQDG--KCISYKWVCDGSAECQDGSDESQETCLSVT 67
Score = 38.5 bits (88), Expect = 0.016
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
P C+ +F C G +CI + CD C D SDEA+CP +T
Sbjct: 105 PPKTCSQDEFRCHDG--KCISRQFVCDSDRDCLDGSDEASCPVLT 147
Score = 36.6 bits (83), Expect = 0.061
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
C P +F C G CI QCD C+D SDE C VT
Sbjct: 236 CRPDEFQCSDGN--CIHGSRQCDREYDCKDMSDEVGCVNVT 274
>gi|11415040 matriptase [Homo sapiens]
Length = 855
Score = 50.1 bits (118), Expect = 5e-06
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 32 PGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
PGQF CR+G +CI +CDGWA C D SDE NC
Sbjct: 454 PGQFTCRTG--RCIRKELRCDGWADCTDHSDELNC 486
Score = 36.6 bits (83), Expect = 0.061
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEV 69
C F C +G +C+ QC+G C D SDEA+CP+V
Sbjct: 525 CPAQTFRCSNG--KCLSKSQQCNGKDDCGDGSDEASCPKV 562
Score = 35.8 bits (81), Expect = 0.10
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 30 CNPG-QFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHGKEAVDPRQ-- 86
C+ G QF C++ C PL W CD C D SDE C R +GK +Q
Sbjct: 488 CDAGHQFTCKNKF--CKPLFWVCDSVNDCGDNSDEQGCSCPAQTFRCSNGKCLSKSQQCN 545
Query: 87 GRARGGDPSHFHAVNVAQPVRFSSFLGKCPTGWHHYEGTASC 128
G+ GD S + V + +C G +G C
Sbjct: 546 GKDDCGDGSDEASCPKVNVVTCTKHTYRCLNGLCLSKGNPEC 587
>gi|46410931 attractin-like 1 [Homo sapiens]
Length = 1379
Score = 49.7 bits (117), Expect = 7e-06
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 27/127 (21%)
Query: 115 CPTGWHHYEGTASCYRVYLSGENYWDAAQTCQRLNGSLATFSTDQELRFVL--AQEWDQP 172
C GW H +C RV S ENY +A C L+G+LA+ +T +E+ FVL Q++ Q
Sbjct: 748 CGEGWSHIGD--ACLRVNSSRENYDNAKLYCYNLSGNLASLTTSKEVEFVLDEIQKYTQQ 805
Query: 173 ERSFGWKDQRKLWVGYQYVITGRNRSLEGRWE--VAFKGSSEVFLPPDPIFASAMSENDN 230
+ S W RK+ + Y WE F ++ +LP +P ND+
Sbjct: 806 KVS-PWVGLRKINISY------------WGWEDMSPFTNTTLQWLPGEP--------NDS 844
Query: 231 VFCAQLQ 237
FCA L+
Sbjct: 845 GFCAYLE 851
>gi|126012562 low density lipoprotein-related protein 1 [Homo
sapiens]
Length = 4544
Score = 48.1 bits (113), Expect = 2e-05
Identities = 28/60 (46%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 11 LLLFLLVLTVTEPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEAN--CPE 68
LLL LL V + C+P QFACR I CI W+CDG C D SDEA CP+
Sbjct: 8 LLLPLLSALVAAAIDAPKTCSPKQFACRD-QITCISKGWRCDGERDCPDGSDEAPEICPQ 66
Score = 47.8 bits (112), Expect = 3e-05
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 25 RPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
RP C+ +F CR + CIPL W+CDG C D SDE +C VT
Sbjct: 1057 RPPGGCHTDEFQCRLDGL-CIPLRWRCDGDTDCMDSSDEKSCEGVT 1101
Score = 47.8 bits (112), Expect = 3e-05
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
PE +C PGQF C +G C + CDG C+D SDEANC
Sbjct: 3370 PEFKCRPGQFQCSTGI--CTNPAFICDGDNDCQDNSDEANC 3408
Score = 47.0 bits (110), Expect = 5e-05
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
RC+ QF C+SG CIPL W+CD A C D SDE C
Sbjct: 3612 RCDMDQFQCKSG--HCIPLRWRCDADADCMDGSDEEAC 3647
Score = 45.8 bits (107), Expect = 1e-04
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE-ANCPEVT 70
PE+ C P QF C S T +CIP W CD C D SDE ANC ++T
Sbjct: 3449 PEVTCAPNQFQC-SITKRCIPRVWVCDRDNDCVDGSDEPANCTQMT 3493
Score = 44.3 bits (103), Expect = 3e-04
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
C P QF C + T +CIP ++C+G C D DE +CPEVT
Sbjct: 3413 CLPSQFKC-TNTNRCIPGIFRCNGQDNCGDGEDERDCPEVT 3452
Score = 42.7 bits (99), Expect = 9e-04
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
P +C PG+FAC + +CI W+CDG C D SDEA
Sbjct: 850 PPPQCQPGEFACANS--RCIQERWKCDGDNDCLDNSDEA 886
Score = 42.0 bits (97), Expect = 0.001
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE-ANC 66
C P QF+C SG +CIP+ W CD C D SDE A+C
Sbjct: 936 CPPNQFSCASG--RCIPISWTCDLDDDCGDRSDESASC 971
Score = 41.6 bits (96), Expect = 0.002
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVR 74
RC FAC SG +CIP+ W CD CE DE +C + E +
Sbjct: 2695 RCPLNYFACPSG--RCIPMSWTCDKEDDCEHGEDETHCNKFCSEAQ 2738
Score = 41.6 bits (96), Expect = 0.002
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 27 ELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
E C P QF C++ +C+P WQCD C D SDE +C
Sbjct: 3533 ERTCEPYQFRCKNN--RCVPGRWQCDYDNDCGDNSDEESC 3570
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/39 (53%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE--ANC 66
C+ QF C SG +CIP W CDG C D SDE ANC
Sbjct: 1015 CSSTQFKCNSG--RCIPEHWTCDGDNDCGDYSDETHANC 1051
Score = 40.4 bits (93), Expect = 0.004
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 30 CNPG-QFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C+P +F C+ +CI W CDG CED SDE NC
Sbjct: 1104 CDPSVKFGCKDSA-RCISKAWVCDGDNDCEDNSDEENC 1140
Score = 40.4 bits (93), Expect = 0.004
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C G+F CR GT CI +C+ + CED SDE NC
Sbjct: 2605 CGVGEFRCRDGT--CIGNSSRCNQFVDCEDASDEMNC 2639
Score = 39.3 bits (90), Expect = 0.009
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE-ANCPE 68
C QF C++ +CIP W+CD C D SDE +CPE
Sbjct: 3334 CTASQFVCKND--KCIPFWWKCDTEDDCGDHSDEPPDCPE 3371
Score = 38.9 bits (89), Expect = 0.012
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C+ +F+C +G +CI W+CDG C D SDE +C
Sbjct: 3575 CSESEFSCANG--RCIAGRWKCDGDHDCADGSDEKDC 3609
Score = 38.5 bits (88), Expect = 0.016
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
C P F+C GT C+P W CDG C D +DE+
Sbjct: 2774 CGPSSFSC-PGTHVCVPERWLCDGDKDCADGADES 2807
Score = 38.1 bits (87), Expect = 0.021
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 34 QFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
QF C +G +CI + W+CD C D SDEA C
Sbjct: 981 QFTCNNG--RCININWRCDNDNDCGDNSDEAGC 1011
Score = 38.1 bits (87), Expect = 0.021
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 27 ELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE--ANCPEVTGE 72
++ C +F C+ +CIP W+CDG C D SDE C E T E
Sbjct: 3491 QMTCGVDEFRCKDSG-RCIPARWKCDGEDDCGDGSDEPKEECDERTCE 3537
Score = 37.4 bits (85), Expect = 0.036
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 30 CNPGQFACRSGTIQCIPL-PWQCDGWATCEDESDEA 64
C P +F C +G +C+ W+CDG C D+SDEA
Sbjct: 2858 CGPSEFRCANG--RCLSSRQWECDGENDCHDQSDEA 2891
Score = 35.4 bits (80), Expect = 0.14
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA-NCPEVTG 71
RC P + C GT C+P+ C+G C D SDE +C E+ G
Sbjct: 71 RCQPNEHNCL-GTELCVPMSRLCNGVQDCMDGSDEGPHCRELQG 113
Score = 35.0 bits (79), Expect = 0.18
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
C+ QF C++ +CI W CDG C D SDEA
Sbjct: 2734 CSEAQFECQNH--RCISKQWLCDGSDDCGDGSDEA 2766
Score = 33.5 bits (75), Expect = 0.52
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
C +F C + C PL W+CDG C D SDE
Sbjct: 3654 CPLDEFQCNNTL--CKPLAWKCDGEDDCGDNSDE 3685
Score = 33.1 bits (74), Expect = 0.68
Identities = 15/36 (41%), Positives = 17/36 (47%)
Query: 28 LRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
L C P C + T C+P CDG C D SDE
Sbjct: 1143 LACRPPSHPCANNTSVCLPPDKLCDGNDDCGDGSDE 1178
Score = 32.7 bits (73), Expect = 0.88
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEAN 65
C +F C + +CIP W CDG C + DE+N
Sbjct: 895 CPSDRFKCENN--RCIPNRWLCDGDNDCGNSEDESN 928
Score = 32.3 bits (72), Expect = 1.2
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 41 TIQCIPLPWQCDGWATCEDESDEANCPEV 69
T C W CDG C D SDE +CP V
Sbjct: 2663 TSLCYAPSWVCDGANDCGDYSDERDCPGV 2691
Score = 32.3 bits (72), Expect = 1.2
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 27 ELRCNPG-QFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
E +CN QF C SG +C+ C+G C D SDE C
Sbjct: 2901 EHKCNASSQFLCSSG--RCVAEALLCNGQDDCGDSSDERGC 2939
Score = 30.8 bits (68), Expect = 3.4
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 30 CNPGQ-FACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
C P + F C++ + C+ + QCDG C D +DE +C T
Sbjct: 3695 CPPNRPFRCKNDRV-CLWIGRQCDGTDNCGDGTDEEDCEPPT 3735
Score = 30.0 bits (66), Expect = 5.7
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA-NCPEVT---GEVRPHHGKEAVDPR 85
C+ +F C++ QCIP + CD C D SDE+ C T E R +G+ + R
Sbjct: 2818 CDDREFMCQNR--QCIPKHFVCDHDRDCADGSDESPECEYPTCGPSEFRCANGR-CLSSR 2874
Query: 86 QGRARGGDPSH 96
Q G + H
Sbjct: 2875 QWECDGENDCH 2885
Score = 29.6 bits (65), Expect = 7.5
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 34 QFACRSGTIQCIPLPWQCDGWATCEDESDE 63
+F C +G +CI CDG C+D+SDE
Sbjct: 2529 EFECANG--ECINFSLTCDGVPHCKDKSDE 2556
>gi|29244926 corin [Homo sapiens]
Length = 1042
Score = 48.1 bits (113), Expect = 2e-05
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C+P F CRSG QC+ +CDG A C+D+SDE NC
Sbjct: 580 CSPSHFKCRSG--QCVLASRRCDGQADCDDDSDEENC 614
Score = 42.0 bits (97), Expect = 0.001
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 27 ELRCN---PGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
E+ C+ G CR+G QCIP +QCDG C+D SDE NC
Sbjct: 374 EVNCSCHSQGLVECRNG--QCIPSTFQCDGDEDCKDGSDEENC 414
Score = 40.4 bits (93), Expect = 0.004
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 27 ELRCNPGQ-FACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHGK 79
+L C G+ F C SG CIP QC+G+ C+D SDEA+C H GK
Sbjct: 266 QLLCGRGENFLCASGI--CIPGKLQCNGYNDCDDWSDEAHCNCSENLFHCHTGK 317
Score = 38.9 bits (89), Expect = 0.012
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
CNP R G +CI + W CDG C D+SDE NC
Sbjct: 342 CNPTT-EHRCGDGRCIAMEWVCDGDHDCVDKSDEVNC 377
Score = 34.3 bits (77), Expect = 0.30
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C+ F C +G +C+ CDG+ C D SDE NC
Sbjct: 306 CSENLFHCHTG--KCLNYSLVCDGYDDCGDLSDEQNC 340
Score = 29.3 bits (64), Expect = 9.8
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C + C + C+ CDG A C D SDE +C
Sbjct: 655 CQDDELECANHA--CVSRDLWCDGEADCSDSSDEWDC 689
>gi|65301164 very low density lipoprotein receptor isoform b [Homo
sapiens]
Length = 845
Score = 48.1 bits (113), Expect = 2e-05
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
+C P QF C +G +CI L W+CDG C D SDE NC + T
Sbjct: 32 KCEPSQFQCTNG--RCITLLWKCDGDEDCVDGSDEKNCVKKT 71
Score = 45.1 bits (105), Expect = 2e-04
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
C + +C + + QCIP+ W+CDG C+ DE NC +T
Sbjct: 113 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNIT 153
Score = 44.3 bits (103), Expect = 3e-04
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
+C + C SG +CI W+CDG C+D SDE NCP T
Sbjct: 238 KCPASEIQCGSG--ECIHKKWRCDGDPDCKDGSDEVNCPSRT 277
Score = 41.6 bits (96), Expect = 0.002
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
C F C +G QC+P W+CDG CED SDE+
Sbjct: 72 CAESDFVCNNG--QCVPSRWKCDGDPDCEDGSDES 104
Score = 41.2 bits (95), Expect = 0.002
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEV 69
P C P QF C G+ CI QC+G C D SDE NC V
Sbjct: 274 PSRTCRPDQFECEDGS--CIHGSRQCNGIRDCVDGSDEVNCKNV 315
Score = 38.5 bits (88), Expect = 0.016
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
C +F C T CIP+ W CD A C D+SDE+
Sbjct: 193 CGAHEFQC--STSSCIPISWVCDDDADCSDQSDES 225
Score = 38.1 bits (87), Expect = 0.021
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 28 LRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
+ C+P +F C SG +CI + C+G C D SDE +C T
Sbjct: 152 ITCSPDEFTCSSG--RCISRNFVCNGQDDCSDGSDELDCAPPT 192
Score = 31.6 bits (70), Expect = 2.0
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 32 PGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
PG+F CRSG +CI + C+ C D SDE
Sbjct: 321 PGKFKCRSG--ECIDISKVCNQEQDCRDWSDE 350
>gi|65301167 very low density lipoprotein receptor isoform a [Homo
sapiens]
Length = 873
Score = 48.1 bits (113), Expect = 2e-05
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
+C P QF C +G +CI L W+CDG C D SDE NC + T
Sbjct: 32 KCEPSQFQCTNG--RCITLLWKCDGDEDCVDGSDEKNCVKKT 71
Score = 45.1 bits (105), Expect = 2e-04
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
C + +C + + QCIP+ W+CDG C+ DE NC +T
Sbjct: 113 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNIT 153
Score = 44.3 bits (103), Expect = 3e-04
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
+C + C SG +CI W+CDG C+D SDE NCP T
Sbjct: 238 KCPASEIQCGSG--ECIHKKWRCDGDPDCKDGSDEVNCPSRT 277
Score = 41.6 bits (96), Expect = 0.002
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
C F C +G QC+P W+CDG CED SDE+
Sbjct: 72 CAESDFVCNNG--QCVPSRWKCDGDPDCEDGSDES 104
Score = 41.2 bits (95), Expect = 0.002
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEV 69
P C P QF C G+ CI QC+G C D SDE NC V
Sbjct: 274 PSRTCRPDQFECEDGS--CIHGSRQCNGIRDCVDGSDEVNCKNV 315
Score = 38.5 bits (88), Expect = 0.016
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
C +F C T CIP+ W CD A C D+SDE+
Sbjct: 193 CGAHEFQC--STSSCIPISWVCDDDADCSDQSDES 225
Score = 38.1 bits (87), Expect = 0.021
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 28 LRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
+ C+P +F C SG +CI + C+G C D SDE +C T
Sbjct: 152 ITCSPDEFTCSSG--RCISRNFVCNGQDDCSDGSDELDCAPPT 192
Score = 31.6 bits (70), Expect = 2.0
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 32 PGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
PG+F CRSG +CI + C+ C D SDE
Sbjct: 321 PGKFKCRSG--ECIDISKVCNQEQDCRDWSDE 350
>gi|157384998 low density lipoprotein receptor-related protein 4
[Homo sapiens]
Length = 1905
Score = 47.8 bits (112), Expect = 3e-05
Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C G+F C SG CI W+CDG A C+D+SDE NC
Sbjct: 231 CRSGEFMCDSGL--CINAGWRCDGDADCDDQSDERNC 265
Score = 45.8 bits (107), Expect = 1e-04
Identities = 22/42 (52%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTG 71
C QF C SG +C+ L W+CDG C D SDE NC E TG
Sbjct: 270 CTAEQFRCHSG--RCVRLSWRCDGEDDCADNSDEENC-ENTG 308
Score = 45.1 bits (105), Expect = 2e-04
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT-------GEVRPHHGKEA 81
+C+ +F C G+ CI W CDG C+D SDE NCP E + +G+
Sbjct: 147 KCSDKEFRCSDGS--CIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLEEFQCAYGRCI 204
Query: 82 VD--PRQGRARGGDPSHFHAVNVAQPVRFSSFL---GKCPTGWHHYEGTASC 128
+D G GD S + QP R F+ G C +G A C
Sbjct: 205 LDIYHCDGDDDCGDWSDESDCSSHQPCRSGEFMCDSGLCINAGWRCDGDADC 256
Score = 44.3 bits (103), Expect = 3e-04
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
C+P F C +G +CI W CDG CED+SDE +CP
Sbjct: 71 CSPLDFHCDNG--KCIRRSWVCDGDNDCEDDSDEQDCP 106
Score = 43.5 bits (101), Expect = 5e-04
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 26 PELRCNPGQFACRS---GTIQCIPLPWQCDGWATCEDESDEANC 66
PE C F C G CIP WQCDG C D SDE C
Sbjct: 23 PECACGRSHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDEDGC 66
Score = 35.4 bits (80), Expect = 0.14
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
P C +F C++G CI W CDG C D SDE
Sbjct: 106 PPRECEEDEFPCQNG--YCIRSLWHCDGDNDCGDNSDE 141
Score = 32.0 bits (71), Expect = 1.5
Identities = 30/111 (27%), Positives = 41/111 (36%), Gaps = 12/111 (10%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA---NCPEVTGEVRPHHGKEAVDPR 85
+C QF C +G +CI C+G C D SDE+ NC TGE + +
Sbjct: 311 QCALDQFLCWNG--RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCAQK 368
Query: 86 QGRARGGDPSHFHA-------VNVAQPVRFSSFLGKCPTGWHHYEGTASCY 129
RG H + Q V + G C G + EG C+
Sbjct: 369 CQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCW 419
>gi|126012573 low density lipoprotein-related protein 2 [Homo
sapiens]
Length = 4655
Score = 47.8 bits (112), Expect = 3e-05
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 6 DSGAFLLLFLLVLTVTEPLRPEL--RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
D G + L+L + L P C+ F C SG CIP W+CDG C D++DE
Sbjct: 2 DRGPAAVACTLLLALVACLAPASGQECDSAHFRCGSG--HCIPADWRCDGTKDCSDDADE 59
Query: 64 ANCPEVT 70
C VT
Sbjct: 60 IGCAVVT 66
Score = 47.4 bits (111), Expect = 3e-05
Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 27 ELRCNP-GQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
E C+P G F C++ CIPL WQCDG C D SDE NC
Sbjct: 3716 ERTCHPVGDFRCKNH--HCIPLRWQCDGQNDCGDNSDEENC 3754
Score = 43.5 bits (101), Expect = 5e-04
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 28 LRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
L C QF C SG +CI + +CDG C D SDEA CP
Sbjct: 1185 LNCTASQFKCASGD-KCIGVTNRCDGVFDCSDNSDEAGCP 1223
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
C+P F C SG C+ +CDG A C D SDEA+CP
Sbjct: 3798 CHPEYFQCTSG--HCVHSELKCDGSADCLDASDEADCP 3833
Score = 42.0 bits (97), Expect = 0.001
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
C+ F C G +CIP W+CD C D SDE NCP
Sbjct: 1067 CSSSAFTCGHG--ECIPAHWRCDKRNDCVDGSDEHNCP 1102
Score = 42.0 bits (97), Expect = 0.001
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
C PGQF C +G +CIP W+CD C D SDE
Sbjct: 3635 CRPGQFRCANG--RCIPQAWKCDVDNDCGDHSDE 3666
Score = 41.6 bits (96), Expect = 0.002
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE-ANCPE 68
C+ QF C + +CIP+ W+CDG C D SDE A CP+
Sbjct: 3512 CSSTQFLCANNE-KCIPIWWKCDGQKDCSDGSDELALCPQ 3550
Score = 40.4 bits (93), Expect = 0.004
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHGKEAVDPRQGR 88
C QF C SG +CI W CDG C+D DE C +V +E P GR
Sbjct: 222 CGGYQFTCPSG--RCIYQNWVCDGEDDCKDNGDEDGCESGPHDVHKCSPREWSCPESGR 278
Score = 38.9 bits (89), Expect = 0.012
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 23 PLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEAN 65
P RP C+ +F C+ I CIP W+CDG C SDE N
Sbjct: 1223 PTRPPGMCHSDEFQCQEDGI-CIPNFWECDGHPDCLYGSDEHN 1264
Score = 37.4 bits (85), Expect = 0.036
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C+P F C +G +C+ ++CD + C D SDEA C
Sbjct: 2741 CSPTAFTCANG--RCVQYSYRCDYYNDCGDGSDEAGC 2775
Score = 37.4 bits (85), Expect = 0.036
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE-ANC 66
C+ +F C SG +CIP W CD C D SDE A+C
Sbjct: 2864 CSSSEFQCASG--RCIPQHWYCDQETDCFDASDEPASC 2899
Score = 37.4 bits (85), Expect = 0.036
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRP 75
C+ ++ C + +CIP WQCD + CED SDE + + RP
Sbjct: 3594 CDSNEWQCANK--RCIPESWQCDTFNDCEDNSDEDSSHCASRTCRP 3637
Score = 37.4 bits (85), Expect = 0.036
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C +F C + QCIP W CD + C D SDE +C
Sbjct: 3759 CTESEFRCVNQ--QCIPSRWICDHYNDCGDNSDERDC 3793
Score = 37.0 bits (84), Expect = 0.047
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE-ANCPEVT 70
C G F C+S QCIP W CD C+D SDE +C + T
Sbjct: 67 CQQGYFKCQSEG-QCIPNSWVCDQDQDCDDGSDERQDCSQST 107
Score = 36.6 bits (83), Expect = 0.061
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C P QF C + +CI L + CDG C D SDE C
Sbjct: 1149 CQPSQFNCPNH--RCIDLSFVCDGDKDCVDGSDEVGC 1183
Score = 35.8 bits (81), Expect = 0.10
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGE 72
C+ Q C +G QCIP ++CD C D +DE +C T E
Sbjct: 108 CSSHQITCSNG--QCIPSEYRCDHVRDCPDGADENDCQYPTCE 148
Score = 35.8 bits (81), Expect = 0.10
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
P +C F C++G +C+P + CDG C D SDE C
Sbjct: 1022 PTEQCGLFSFPCKNG--RCVPNYYLCDGVDDCHDNSDEQLC 1060
Score = 35.0 bits (79), Expect = 0.18
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 27 ELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
E C +F C G +CIP W CDG C D SDE
Sbjct: 2903 ERTCLADEFKCDGG--RCIPSEWICDGDNDCGDMSDE 2937
Score = 33.9 bits (76), Expect = 0.40
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
RC F C +G +CI W+CD C D SDE
Sbjct: 2699 RCGASSFTCSNG--RCISEEWKCDNDNDCGDGSDE 2731
Score = 33.9 bits (76), Expect = 0.40
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
P+ C G C + I CIP + CDG C D SDE
Sbjct: 2818 PDRTCQSGYTKCHNSNI-CIPRVYLCDGDNDCGDNSDE 2854
Score = 33.9 bits (76), Expect = 0.40
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 30 CNPGQFAC---RSGTIQCIPLPWQCDGWATCEDESDE-ANCPEVT 70
C+ +F C R +CIP W CDG C D DE NC T
Sbjct: 2948 CSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCTDGYDENQNCTRRT 2992
Score = 33.5 bits (75), Expect = 0.52
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
C F C +G CI W CD C D SDE +CP
Sbjct: 1271 CPSSYFHCDNGN--CIHRAWLCDRDNDCGDMSDEKDCP 1306
Score = 33.1 bits (74), Expect = 0.68
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C +F+C +G +CIP + CD C+D SDE C
Sbjct: 183 CLHNEFSCGNG--ECIPRAYVCDHDNDCQDGSDEHAC 217
Score = 33.1 bits (74), Expect = 0.68
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 23 PLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
P C Q+ C + QCI W CD C D SDE NC
Sbjct: 1102 PTHAPASCLDTQYTCDNH--QCISKNWVCDTDNDCGDGSDEKNC 1143
Score = 33.1 bits (74), Expect = 0.68
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
PE C P +F C +G +CI + C+ C D SDE C
Sbjct: 3071 PEPTCPPHEFKCDNG--RCIEMMKLCNHLDDCLDNSDEKGC 3109
Score = 33.1 bits (74), Expect = 0.68
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
C F C++ CIP W+CDG C D SDE
Sbjct: 3842 CQATMFECKNHV--CIPPYWKCDGDDDCGDGSDE 3873
Score = 32.7 bits (73), Expect = 0.88
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C+ +F C G CIP ++CD C D SDE C
Sbjct: 2993 CSENEFTCGYGL--CIPKIFRCDRHNDCGDYSDERGC 3027
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 34 QFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
+F+C++ +CIP C+G C D SDE C E T
Sbjct: 3683 EFSCKTN-YRCIPKWAVCNGVDDCRDNSDEQGCEERT 3718
Score = 32.0 bits (71), Expect = 1.5
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 34 QFACRSGTIQCIPLPWQCDGWATCEDE--SDEANCPEVT 70
+F C + +CIP + C+G C D SDE NCP+ T
Sbjct: 2785 EFMCNNR--RCIPREFICNGVDNCHDNNTSDEKNCPDRT 2821
Score = 31.2 bits (69), Expect = 2.6
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 34 QFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEV 69
Q C +G C +CD C D SDE NC E+
Sbjct: 149 QLTCDNGA--CYNTSQKCDWKVDCRDSSDEINCTEI 182
Score = 29.6 bits (65), Expect = 7.5
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE----ANCPEVTGEVRPHHGK 79
C QF C++G +CI + CD C D SDE + PE T PH K
Sbjct: 3032 CQQNQFTCQNG--RCISKTFVCDEDNDCGDGSDELMHLCHTPEPT--CPPHEFK 3081
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 47.0 bits (110), Expect = 5e-05
Identities = 29/76 (38%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Query: 19 TVTEPLR---PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRP 75
T + PL P C P +F C SG +C P W+CD C D SDE C G P
Sbjct: 1551 TASSPLASASPAPPCGPFEFRCGSG--ECTPRGWRCDQEEDCADGSDERGC---GGPCAP 1605
Query: 76 HH-----GKEAVDPRQ 86
HH G V P Q
Sbjct: 1606 HHAPCARGPHCVSPEQ 1621
Score = 36.2 bits (82), Expect = 0.080
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
P ++C PGQ C + C+ CDG C D SDE +C
Sbjct: 2387 PPVQCGPGQTPCE--VLGCVEQAQVCDGREDCLDGSDERHC 2425
Score = 35.0 bits (79), Expect = 0.18
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
P C G AC G +C+P CDG C D +DE +C
Sbjct: 1448 PSYPCPQGLLACADG--RCLPPALLCDGHPDCLDAADEESC 1486
Score = 35.0 bits (79), Expect = 0.18
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 112 LGKCPTGWHHYEGTA-SCYRVYLSGENYWDAAQTCQRLNGSLATFSTDQELRFVLA 166
LG CP GW EGT SC L GEN QT Q + A + ++RF LA
Sbjct: 2004 LGSCPQGWVLVEGTGESCCHCALPGEN-----QTVQPMATPAAAPAPSPQIRFPLA 2054
Score = 34.7 bits (78), Expect = 0.23
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C+P Q +C SG +C+ +CD C+D SDE C
Sbjct: 2464 CSPSQLSCGSG--ECLSAERRCDLRPDCQDGSDEDGC 2498
Score = 34.3 bits (77), Expect = 0.30
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
C GQ C SG C+PL CD C D +DE + P
Sbjct: 1416 CGEGQMTCSSG--HCLPLALLCDRQDDCGDGTDEPSYP 1451
Score = 34.3 bits (77), Expect = 0.30
Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 16/63 (25%)
Query: 23 PLRPELR-CNPGQ----------FACRSGTIQCIPLPWQCDGWATCEDESDEANC---PE 68
PL+ EL C PG C SG +C+ CDG CED SDE C PE
Sbjct: 2216 PLQVELLGCEPGSPPAPLCPGVGLRCASG--ECVLRGGPCDGVLDCEDGSDEEGCVLLPE 2273
Query: 69 VTG 71
TG
Sbjct: 2274 GTG 2276
Score = 33.1 bits (74), Expect = 0.68
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C G+ C+ C+P W CD C D SDE C
Sbjct: 1376 CAEGEALCQENG-HCVPHGWLCDNQDDCGDGSDEEGC 1411
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 46.6 bits (109), Expect = 6e-05
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
P C P +F C +G C W+CDG CED +DEANCP
Sbjct: 321 PPPPCEPNEFPCGNG--HCALKLWRCDGDFDCEDRTDEANCP 360
Score = 45.4 bits (106), Expect = 1e-04
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 22 EPLRP----ELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
+PL P L C P + ACR+G CIP + CDG CED SDE +C
Sbjct: 273 QPLLPGSVRPLPCGPQEAACRNG--HCIPRDYLCDGQEDCEDGSDELDC 319
Score = 43.1 bits (100), Expect = 7e-04
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 25 RPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
RPE C P QF C S T CIP + CD + C D SDE C
Sbjct: 363 RPEEVCGPTQFRCVS-TNMCIPASFHCDEESDCPDRSDEFGC 403
Score = 40.0 bits (92), Expect = 0.006
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRP 75
C +FAC S +C+ L ++CD C D SDE NC E + P
Sbjct: 199 CTEAEFACHSYN-ECVALEYRCDRRPDCRDMSDELNCEEPVLGISP 243
>gi|61744467 low density lipoprotein receptor-related protein 8
isoform 3 precursor [Homo sapiens]
Length = 700
Score = 45.1 bits (105), Expect = 2e-04
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 15/75 (20%)
Query: 9 AFLLLFLLVLTV---------TEPLR----PELRCNPGQFACRSGTIQCIPLPWQCDGWA 55
A LLL LL+L + +PL P C QF CR+ +CIP W+CD
Sbjct: 13 ALLLLLLLLLLLQLQHLAAAAADPLLGGQGPAKDCEKDQFQCRNE--RCIPSVWRCDEDD 70
Query: 56 TCEDESDEANCPEVT 70
C D SDE +CP+ T
Sbjct: 71 DCLDHSDEDDCPKKT 85
Score = 40.8 bits (94), Expect = 0.003
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVR 74
C + +C + +C+P W+CDG CE +DEA C G R
Sbjct: 127 CPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGCATSLGTCR 171
Score = 35.4 bits (80), Expect = 0.14
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
P+ C F C +G CI W+CDG C D SDE+
Sbjct: 82 PKKTCADSDFTCDNG--HCIHERWKCDGEEECPDGSDES 118
Score = 30.0 bits (66), Expect = 5.7
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHG 78
C +F C GT C+ C+ C D SDEA C + E ++G
Sbjct: 170 CRGDEFQCGDGT--CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHNNG 216
>gi|66082554 low density lipoprotein receptor-related protein 8
isoform 2 precursor [Homo sapiens]
Length = 793
Score = 45.1 bits (105), Expect = 2e-04
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 15/75 (20%)
Query: 9 AFLLLFLLVLTV---------TEPLR----PELRCNPGQFACRSGTIQCIPLPWQCDGWA 55
A LLL LL+L + +PL P C QF CR+ +CIP W+CD
Sbjct: 13 ALLLLLLLLLLLQLQHLAAAAADPLLGGQGPAKDCEKDQFQCRNE--RCIPSVWRCDEDD 70
Query: 56 TCEDESDEANCPEVT 70
C D SDE +CP+ T
Sbjct: 71 DCLDHSDEDDCPKKT 85
Score = 40.0 bits (92), Expect = 0.006
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHG 78
C + +C + +C+P W+CDG CE +DEA C E ++G
Sbjct: 127 CPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGCATWLNECLHNNG 175
Score = 35.4 bits (80), Expect = 0.14
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
P+ C F C +G CI W+CDG C D SDE+
Sbjct: 82 PKKTCADSDFTCDNG--HCIHERWKCDGEEECPDGSDES 118
>gi|239755250 PREDICTED: chromosome 10 open reading frame 112 [Homo
sapiens]
Length = 1542
Score = 44.7 bits (104), Expect = 2e-04
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 23 PLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
P++P C QF+C T+QC+PL +CDG C D SDE +CP
Sbjct: 1332 PVQPS-PCEADQFSCIY-TLQCVPLSGKCDGHEDCIDGSDEMDCP 1374
Score = 34.7 bits (78), Expect = 0.23
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
P C +F CRS CI +CD C D+SDEA+C
Sbjct: 411 PPHNCTDNEFICRSDG-HCIEKMQKCDFKYDCPDKSDEASC 450
Score = 34.7 bits (78), Expect = 0.23
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCED-ESDEANCPE 68
C+ G C S CIP +CDG+A C D + DE++C +
Sbjct: 1421 CSNGALVCASSN-SCIPAHQRCDGFADCMDFQLDESSCSD 1459
>gi|239749752 PREDICTED: chromosome 10 open reading frame 112 [Homo
sapiens]
Length = 1817
Score = 44.7 bits (104), Expect = 2e-04
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 23 PLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
P++P C QF+C T+QC+PL +CDG C D SDE +CP
Sbjct: 1607 PVQPS-PCEADQFSCIY-TLQCVPLSGKCDGHEDCIDGSDEMDCP 1649
Score = 34.7 bits (78), Expect = 0.23
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
P C +F CRS CI +CD C D+SDEA+C
Sbjct: 686 PPHNCTDNEFICRSDG-HCIEKMQKCDFKYDCPDKSDEASC 725
Score = 34.7 bits (78), Expect = 0.23
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCED-ESDEANCPE 68
C+ G C S CIP +CDG+A C D + DE++C +
Sbjct: 1696 CSNGALVCASSN-SCIPAHQRCDGFADCMDFQLDESSCSD 1734
Score = 33.1 bits (74), Expect = 0.68
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
C+ +F C SG QCI CD C DESDE
Sbjct: 74 CSADEFPCTSG--QCIAKESVCDSRQDCSDESDE 105
>gi|239744011 PREDICTED: chromosome 10 open reading frame 112 [Homo
sapiens]
Length = 1817
Score = 44.7 bits (104), Expect = 2e-04
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 23 PLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
P++P C QF+C T+QC+PL +CDG C D SDE +CP
Sbjct: 1607 PVQPS-PCEADQFSCIY-TLQCVPLSGKCDGHEDCIDGSDEMDCP 1649
Score = 34.7 bits (78), Expect = 0.23
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
P C +F CRS CI +CD C D+SDEA+C
Sbjct: 686 PPHNCTDNEFICRSDG-HCIEKMQKCDFKYDCPDKSDEASC 725
Score = 34.7 bits (78), Expect = 0.23
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCED-ESDEANCPE 68
C+ G C S CIP +CDG+A C D + DE++C +
Sbjct: 1696 CSNGALVCASSN-SCIPAHQRCDGFADCMDFQLDESSCSD 1734
Score = 33.1 bits (74), Expect = 0.68
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
C+ +F C SG QCI CD C DESDE
Sbjct: 74 CSADEFPCTSG--QCIAKESVCDSRQDCSDESDE 105
>gi|93102379 low density lipoprotein-related protein 1B precursor
[Homo sapiens]
Length = 4599
Score = 44.7 bits (104), Expect = 2e-04
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 11 LLLFLLVLTVTEPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA--NCPE 68
LL VLTV R + C+PG+F C + C+ W CDG C D+SDE+ CPE
Sbjct: 14 LLPIARVLTVGAD-RDQQLCDPGEFLCHDH-VTCVSQSWLCDGDPDCPDDSDESLDTCPE 71
Score = 44.3 bits (103), Expect = 3e-04
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
PE C+P F C++ T CI W CD C D SDEANC + T
Sbjct: 3432 PENSCSPDYFQCKT-TKHCISKLWVCDEDPDCADASDEANCDKKT 3475
Score = 43.9 bits (102), Expect = 4e-04
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 26 PELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
PE RC PG+F C GT C + CDG C D SDE NC
Sbjct: 3353 PEFRCQPGRFQC--GTGLCALPAFICDGENDCGDNSDELNC 3391
Score = 43.5 bits (101), Expect = 5e-04
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
C P +F C++ CIP W+CD C D SDE NC T
Sbjct: 3476 CGPHEFQCKNNN--CIPDHWRCDSQNDCSDNSDEENCKPQT 3514
Score = 43.1 bits (100), Expect = 7e-04
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 27 ELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
E C+ QF C +G QCIP W+CDG C+ DE +C
Sbjct: 3550 ETSCSKDQFRCSNG--QCIPAKWKCDGHEDCKYGEDEKSC 3587
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C QF C++ CIP+ W CDG C D SDE NC
Sbjct: 3632 CKEDQFRCKNKA-HCIPIRWLCDGIHDCVDGSDEENC 3667
Score = 41.6 bits (96), Expect = 0.002
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPE 68
C GQF C +CIP+ +C+G C DE DE +CPE
Sbjct: 3396 CLSGQFKCTKNQ-KCIPVNLRCNGQDDCGDEEDERDCPE 3433
Score = 41.2 bits (95), Expect = 0.002
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 22 EPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
E + CN +F C C+P W+CDG CED SDE C
Sbjct: 1045 EEIHSPAGCNGNEFQCHPDG-NCVPDLWRCDGEKDCEDGSDEKGC 1088
Score = 40.4 bits (93), Expect = 0.004
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 23 PLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
P++ + +C F+C SG +CI W CDG CED DE +C
Sbjct: 2675 PVQNKHKCEENYFSCPSG--RCILNTWICDGQKDCEDGRDEFHC 2716
Score = 39.3 bits (90), Expect = 0.009
Identities = 21/39 (53%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA--NC 66
C QF C SG +CIP W CDG C D SDEA NC
Sbjct: 1006 CFDNQFRCSSG--RCIPGHWACDGDNDCGDFSDEAQINC 1042
Score = 38.9 bits (89), Expect = 0.012
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA-NCPE 68
C QF C+ T +CIP W+CD C D SDE +CPE
Sbjct: 3317 CTASQFRCK--TDKCIPFWWKCDTVDDCGDGSDEPDDCPE 3354
Score = 38.1 bits (87), Expect = 0.021
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 23 PLRPELR-----CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
PL P+ + CN F C++G +CIP CD C D SDE NC
Sbjct: 2879 PLNPKCKSAEQSCNSSFFMCKNG--RCIPSGGLCDNKDDCGDGSDERNC 2925
Score = 37.4 bits (85), Expect = 0.036
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 30 CNP-GQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C P QF C+SG +CI W CD C D SDE C
Sbjct: 967 CEPLTQFVCKSG--RCISSKWHCDSDDDCGDGSDEVGC 1002
Score = 37.4 bits (85), Expect = 0.036
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 34 QFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
+F+C S T +CI W CDG CED+SDE +C
Sbjct: 1100 KFSCWS-TGRCINKAWVCDGDIDCEDQSDEDDC 1131
Score = 36.6 bits (83), Expect = 0.061
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE-ANCPEVTGE 72
C QF+C +G +CIP W CD C D++DE A+C T E
Sbjct: 927 CQVDQFSCGNG--RCIPRAWLCDREDDCGDQTDEMASCEFPTCE 968
Score = 35.8 bits (81), Expect = 0.10
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 28 LRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
+ C F+C+ G+ C+P W CDG C D SDE
Sbjct: 2759 ITCAADMFSCQ-GSRACVPRHWLCDGERDCPDGSDE 2793
Score = 35.4 bits (80), Expect = 0.14
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE--ANC 66
C G+F C++ CI W+CDG C D SDE NC
Sbjct: 845 CKAGEFRCKNR--HCIQARWKCDGDDDCLDGSDEDSVNC 881
Score = 35.4 bits (80), Expect = 0.14
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C +FAC + +CIP+ QCD C D SDE C
Sbjct: 3762 CKKDEFACSNK--KCIPMDLQCDRLDDCGDGSDEQGC 3796
Score = 35.0 bits (79), Expect = 0.18
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEAN 65
C QF C++ +CIP W CDG C DE+N
Sbjct: 886 CPDDQFKCQNN--RCIPKRWLCDGANDCGSNEDESN 919
Score = 33.9 bits (76), Expect = 0.40
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEA 64
+C +F+C G + WQCDG C D SDEA
Sbjct: 2844 QCGTEEFSCADGRC-LLNTQWQCDGDFDCPDHSDEA 2878
Score = 33.5 bits (75), Expect = 0.52
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C +F C GT CIP +C+ C D SDE NC
Sbjct: 2591 CATVEFRCADGT--CIPRSARCNQNIDCADASDEKNC 2625
Score = 32.7 bits (73), Expect = 0.88
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 33 GQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
G C S ++ C+ W CDG C D SDE CP
Sbjct: 2642 GFIRCNSTSL-CVLPTWICDGSNDCGDYSDELKCP 2675
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C F C +G C+ + CDG C D SDE NC
Sbjct: 3515 CTLKDFLCANG--DCVSSRFWCDGDFDCADGSDERNC 3549
Score = 32.0 bits (71), Expect = 1.5
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEAN--CPEVT--GEVRPHHGKEAVDPR 85
C+ QFAC + +CI W CDG C D DE++ C +T ++ G A PR
Sbjct: 2720 CSWNQFACSAQ--KCISKHWICDGEDDCGDGLDESDSICGAITCAADMFSCQGSRACVPR 2777
Score = 30.8 bits (68), Expect = 3.4
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 21 TEPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE-ANCPEV 69
T P E++C AC GT +C+ L C+G C D DE +C E+
Sbjct: 68 TCPEEVEIKCPLNHIACL-GTNKCVHLSQLCNGVLDCPDGYDEGVHCQEL 116
Score = 30.0 bits (66), Expect = 5.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 30 CNP-GQFACRSGTIQCIPLPWQCDGWATCEDESDE 63
CN +F C +G +CI CDG C+D+SDE
Sbjct: 2510 CNAYSEFECGNG--ECIDYQLTCDGIPHCKDKSDE 2542
Score = 30.0 bits (66), Expect = 5.7
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 82 VDPRQGRARGGDPSHFHAVNVAQPVRFSSFL-GKCPTGWHHYEGTASCYRVYLSGEN 137
+DP + R GG PS F + A P+ +S L G G +Y ++Y+ G+N
Sbjct: 4516 IDPTKARYIGGGPSAFKLPHTAPPIYLNSDLKGPLTAGPTNYSNPVYA-KLYMDGQN 4571
Score = 29.6 bits (65), Expect = 7.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 22 EPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
EP P C+ ++ C S CI +C+G C D SDE +C
Sbjct: 3588 EPASPT--CSSREYICASDG--CISASLKCNGEYDCADGSDEMDC 3628
Score = 29.3 bits (64), Expect = 9.8
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 36 ACRSG-----TIQCIPLPWQCDGWATCEDESDEANC 66
+CR G +CIP CDG C D SDE +C
Sbjct: 2551 SCRRGFKPCYNRRCIPHGKLCDGENDCGDNSDELDC 2586
>gi|167555125 low density lipoprotein receptor-related protein 3
[Homo sapiens]
Length = 770
Score = 43.9 bits (102), Expect = 4e-04
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 26 PELRCNPGQFACRSG-TIQCIPLPWQCDGWATCEDESDEANCPEVT--GEVRPHHGKEAV 82
P C G F C + +C+P+ +CDG C D SDEA CP++ + +G A
Sbjct: 208 PGSLCPGGTFPCSGARSTRCLPVERRCDGLQDCGDGSDEAGCPDLACGRRLGSFYGSFAS 267
Query: 83 DPRQGRARGGDPSHFH 98
G ARG PS H
Sbjct: 268 PDLFGAARG--PSDLH 281
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C PG F C GT CI W+CDG C+D SDE C
Sbjct: 455 CQPGTFHC--GTNLCIFETWRCDGQEDCQDGSDEHGC 489
Score = 42.0 bits (97), Expect = 0.001
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGE 72
C +F C +G +C+P PWQC+ C D SDE NC E
Sbjct: 166 CQADEFRCDNG--KCLPGPWQCNTVDECGDGSDEGNCSAPASE 206
Score = 33.9 bits (76), Expect = 0.40
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C P Q+ C G+ C +C+ +C D +DE NC
Sbjct: 416 CPPDQYPCEGGSGLCYTPADRCNNQKSCPDGADEKNC 452
Score = 32.3 bits (72), Expect = 1.2
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 44 CIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHG 78
C P +CDGW C DE CP + P G
Sbjct: 391 CFSEPQRCDGWWHCASGRDEQGCPACPPDQYPCEG 425
>gi|4507157 sortilin-related receptor containing LDLR class A repeats
preproprotein [Homo sapiens]
Length = 2214
Score = 43.9 bits (102), Expect = 4e-04
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVT 70
C+ F C++G CI L W+CDG C D SDEANC T
Sbjct: 1325 CDEFGFQCQNGV--CISLIWKCDGMDDCGDYSDEANCENPT 1363
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
C P + C SGT C+ W CDG+ C D SDE CP
Sbjct: 1419 CLPNYYRCSSGT--CVMDTWVCDGYRDCADGSDEEACP 1454
Score = 41.6 bits (96), Expect = 0.002
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDE--ANCPEVTGEVRPHHG 78
C F CR+G CIP W CDG C+D SDE NC + R +G
Sbjct: 1199 CEASNFQCRNG--HCIPQRWACDGDTDCQDGSDEDPVNCEKKCNGFRCPNG 1247
Score = 40.8 bits (94), Expect = 0.003
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEV 69
+C ++ C SG CI W CDG C D SDEANC +
Sbjct: 1157 QCRSDEYNCSSG--MCIRSSWVCDGDNDCRDWSDEANCTAI 1195
Score = 40.4 bits (93), Expect = 0.004
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 23 PLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPE 68
P L C +F C G CI L +CDG+ C DESDE C +
Sbjct: 1507 PTHSTLTCMSREFQCEDGEA-CIVLSERCDGFLDCSDESDEKACSD 1551
Score = 39.7 bits (91), Expect = 0.007
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 22 EPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
+P+ E +CN F C +GT CIP CDG C D SDE +C
Sbjct: 1231 DPVNCEKKCNG--FRCPNGT--CIPSSKHCDGLRDCSDGSDEQHC 1271
Score = 38.9 bits (89), Expect = 0.012
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 29 RCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
RC+ +F C CIP +CDG C+D DEANCP
Sbjct: 1470 RCDRFEFECHQPKT-CIPNWKRCDGHQDCQDGRDEANCP 1507
Score = 36.6 bits (83), Expect = 0.061
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 24 LRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCP 67
++ E C Q+ C +G CI W CD C D SDE NCP
Sbjct: 1072 VKEENTCLRNQYRCSNGN--CINSIWWCDFDNDCGDMSDERNCP 1113
Score = 35.8 bits (81), Expect = 0.10
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 34 QFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
QF C +G CIP W+CD C D SDE +C
Sbjct: 1373 QFRCENG--HCIPNRWKCDRENDCGDWSDEKDC 1403
Score = 35.4 bits (80), Expect = 0.14
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 34 QFACR-SGTIQCIPLPWQCDGWATCEDESDEANC 66
QF C+ SGT CIPL ++CD C D SDE++C
Sbjct: 1122 QFRCQESGT--CIPLSYKCDLEDDCGDNSDESHC 1153
>gi|7706111 8D6 antigen [Homo sapiens]
Length = 282
Score = 43.9 bits (102), Expect = 4e-04
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 28 LRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHGKEAVDP 84
L C G+ C CIPL W+CDG C D SDE C T E+ P + P
Sbjct: 130 LACLAGELRCTLSD-DCIPLTWRCDGHPDCPDSSDELGCG--TNEILPEGDATTMGP 183
Score = 42.4 bits (98), Expect = 0.001
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 30 CNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANC 66
C P +F CR+ + C+PL W+CD C D SDE C
Sbjct: 54 CPPTKFQCRTSGL-CVPLTWRCDRDLDCSDGSDEEEC 89
>gi|55953106 phospholipase A2 receptor 1 isoform 2 precursor [Homo
sapiens]
Length = 1324
Score = 43.1 bits (100), Expect = 7e-04
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 13/95 (13%)
Query: 115 CPTGWHHYEGTASCYRVY-----LSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEW 169
C W G ASC++V+ L + +A C+ LA+F+ +E FV
Sbjct: 664 CYLDWESEPGLASCFKVFHSEKVLMKRTWREAEAFCEEFGAHLASFAHIEEENFVN---- 719
Query: 170 DQPERSFGWKDQRKLWVGYQYVITGRNRSLEGRWE 204
+ F W ++R+ W+G+ RN G WE
Sbjct: 720 ELLHSKFNWTEERQFWIGF----NKRNPLNAGSWE 750
Score = 36.6 bits (83), Expect = 0.061
Identities = 32/170 (18%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 115 CPTGWHHYEGTASCYRVYLSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEWDQPER 174
C GW+ Y +CY++ + + +A ++CQ N +L ++ E+ F++
Sbjct: 378 CEPGWNPYN--RNCYKLQKEEKTWHEALRSCQADNSALIDITSLAEVEFLVT-------- 427
Query: 175 SFGWKDQRKLWVGYQYVITGRNRSLEGRWEVAFKGSSEVFLPPDPIFASAMSENDNVFCA 234
G ++ + W+G + V+F+ S++ IF + + ++F
Sbjct: 428 LLGDENASETWIGLS----------SNKIPVSFEWSND----SSVIFTNWHTLEPHIFPN 473
Query: 235 QLQ-CFHFPTLRHHDLHSWHAESCYEKSSFLCKRSQTCVDIKDNVVDEGF 283
+ Q C H W ++C E+ ++CK++ + ++ EG+
Sbjct: 474 RSQLCVSAEQSEGH----WKVKNCEERLFYICKKAGHVLSDAESGCQEGW 519
>gi|55953104 phospholipase A2 receptor 1 isoform 1 precursor [Homo
sapiens]
Length = 1463
Score = 43.1 bits (100), Expect = 7e-04
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 13/95 (13%)
Query: 115 CPTGWHHYEGTASCYRVY-----LSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEW 169
C W G ASC++V+ L + +A C+ LA+F+ +E FV
Sbjct: 664 CYLDWESEPGLASCFKVFHSEKVLMKRTWREAEAFCEEFGAHLASFAHIEEENFVN---- 719
Query: 170 DQPERSFGWKDQRKLWVGYQYVITGRNRSLEGRWE 204
+ F W ++R+ W+G+ RN G WE
Sbjct: 720 ELLHSKFNWTEERQFWIGF----NKRNPLNAGSWE 750
Score = 36.6 bits (83), Expect = 0.061
Identities = 32/170 (18%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 115 CPTGWHHYEGTASCYRVYLSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEWDQPER 174
C GW+ Y +CY++ + + +A ++CQ N +L ++ E+ F++
Sbjct: 378 CEPGWNPYN--RNCYKLQKEEKTWHEALRSCQADNSALIDITSLAEVEFLVT-------- 427
Query: 175 SFGWKDQRKLWVGYQYVITGRNRSLEGRWEVAFKGSSEVFLPPDPIFASAMSENDNVFCA 234
G ++ + W+G + V+F+ S++ IF + + ++F
Sbjct: 428 LLGDENASETWIGLS----------SNKIPVSFEWSND----SSVIFTNWHTLEPHIFPN 473
Query: 235 QLQ-CFHFPTLRHHDLHSWHAESCYEKSSFLCKRSQTCVDIKDNVVDEGF 283
+ Q C H W ++C E+ ++CK++ + ++ EG+
Sbjct: 474 RSQLCVSAEQSEGH----WKVKNCEERLFYICKKAGHVLSDAESGCQEGW 519
>gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]
Length = 1321
Score = 43.1 bits (100), Expect = 7e-04
Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 30/153 (19%)
Query: 115 CPTGWHHYEGTASCYRVYLSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEWDQPER 174
C GWH ++G CYR + + DA + C+R +G L + + +E F+
Sbjct: 1088 CDRGWHKFQG--HCYRYFAHRRAWEDAEKDCRRRSGHLTSVHSPEEHSFI---------N 1136
Query: 175 SFGWKDQRKLWVGYQYVITGRNRSLEGRWEVAFKGSSEVFLPPDPIFASAMSENDNVFCA 234
SFG W+G I R+ + F+ E ++ DN F
Sbjct: 1137 SFG---HENTWIGLNDRIVERDFQWTDNTGLQFENWRE-------------NQPDNFFAG 1180
Query: 235 QLQCFHFPTLRHHDLHSWHAESCYEKSSFLCKR 267
C + H+ W+ C ++CK+
Sbjct: 1181 GEDCV---VMVAHESGRWNDVPCNYNLPYVCKK 1210
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,733,947
Number of Sequences: 37866
Number of extensions: 1608048
Number of successful extensions: 6146
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 211
Number of HSP's that attempted gapping in prelim test: 5541
Number of HSP's gapped (non-prelim): 777
length of query: 550
length of database: 18,247,518
effective HSP length: 107
effective length of query: 443
effective length of database: 14,195,856
effective search space: 6288764208
effective search space used: 6288764208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.