LDLR 28951

Name: LDLR	Sequence: fasta or formatted (860aa)		NCBI GI: 4504975
Description: low density lipoprotein receptor precursor		Referenced in: Major Disease Loci Epidermal Growth Factor Lipoproteins Additional Membrane Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 43 3 C cysteine 7.3 63 1 D aspartate 8.7 75 2 E glutamate 5.6 48 2 F phenylalanine 3.0 26 2 G glycine 7.2 62 2 H histidine 2.2 19 1 I isoleucine 4.2 36 2 K lysine 4.2 36 2 L leucine 7.7 66 3 M methionine 1.3 11 1 N asparagine 4.8 41 2 P proline 4.5 39 2 Q glutamine 4.0 34 1 R arginine 5.3 46 2 S serine 8.1 70 2 T threonine 5.8 50 3 V valine 6.7 58 2 W tryptophan 2.3 20 1 Y tyrosine 2.0 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 low density lipoprotein receptor precursor VLDLR 0.488 very low density lipoprotein receptor isoform a [Hom... VLDLR 0.471 very low density lipoprotein receptor isoform b [Hom... LRP8 0.437 low density lipoprotein receptor-related protein 8 i... LRP8 0.431 low density lipoprotein receptor-related protein 8 i... LRP8 0.371 low density lipoprotein receptor-related protein 8 i... LRP8 0.362 low density lipoprotein receptor-related protein 8 i... LRP4 0.293 low density lipoprotein receptor-related protein 4 ... LRP1 0.263 low density lipoprotein-related protein 1 LRP1B 0.257 low density lipoprotein-related protein 1B precursor... LRP2 0.254 low density lipoprotein-related protein 2 LRP6 0.113 low density lipoprotein receptor-related protein 6 ... EGF 0.112 epidermal growth factor (beta-urogastrone) SORL1 0.112 sortilin-related receptor containing LDLR class A rep... LRP5 0.112 low density lipoprotein receptor-related protein 5 ... SSPO 0.094 SCO-spondin NID1 0.065 nidogen 1 precursor CORIN 0.062 corin HSPG2 0.058 heparan sulfate proteoglycan 2 NID2 0.057 nidogen 2 precursor ST14 0.057 matriptase LRP5L 0.055 low density lipoprotein receptor-related protein 5-l... LRP5L 0.055 low density lipoprotein receptor-related protein 5-... FBN2 0.042 fibrillin 2 precursor MEGF6 0.041 EGF-like-domain, multiple 3 SCUBE1 0.041 signal peptide, CUB domain, EGF-like 1 LDLRAD3 0.041 low density lipoprotein receptor class A domain cont... LTBP1 0.041 latent transforming growth factor beta binding prote... LTBP1 0.041 latent transforming growth factor beta binding prote... LRP3 0.039 low density lipoprotein receptor-related protein 3 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.