Search of human proteins with 4757918

Search of human proteins with 4757918

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4757918 runt-related transcription factor 3 isoform 2 [Homo
sapiens]
         (415 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4757918 runt-related transcription factor 3 isoform 2 [Homo s...   849   0.0  
gi|72534652 runt-related transcription factor 3 isoform 1 [Homo ...   839   0.0  
gi|49574546 runt-related transcription factor 1 isoform AML1b [H...   486   e-137
gi|19923198 runt-related transcription factor 1 isoform AML1c [H...   476   e-134
gi|226442791 runt-related transcription factor 2 isoform b [Homo...   461   e-130
gi|66934969 runt-related transcription factor 2 isoform c [Homo ...   436   e-122
gi|226442783 runt-related transcription factor 2 isoform a [Homo...   426   e-119
gi|169790837 runt-related transcription factor 1 isoform AML1a [...   334   1e-91
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p...    42   0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        40   0.004
gi|56549696 E1A binding protein p400 [Homo sapiens]                    40   0.005
gi|206597509 HIV-1 Rev binding protein isoform 4 [Homo sapiens]        40   0.005
gi|38570132 HIV-1 Rev binding protein isoform 2 [Homo sapiens]         40   0.005
gi|116284392 mucin 2 precursor [Homo sapiens]                          39   0.009
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]       39   0.009
gi|110431352 transducer of regulated CREB protein 3 isoform b [H...    39   0.011
gi|110431354 transducer of regulated CREB protein 3 isoform a [H...    39   0.011
gi|112734870 hypothetical protein LOC57648 [Homo sapiens]              39   0.011
gi|239754668 PREDICTED: mucin 12 [Homo sapiens]                        38   0.015
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    38   0.019
gi|57863314 vacuolar protein sorting 37C [Homo sapiens]                38   0.019
gi|161019170 mucin 5AC [Homo sapiens]                                  37   0.025
gi|239743293 PREDICTED: mucin 12 [Homo sapiens]                        37   0.025
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     37   0.033
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]     37   0.033
gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo s...    37   0.033
gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo s...    37   0.033
gi|5031887 LIM domain containing preferred translocation partner...    37   0.043
gi|55750053 atrophin-1 [Homo sapiens]                                  36   0.056
gi|55750041 atrophin-1 [Homo sapiens]                                  36   0.056

>gi|4757918 runt-related transcription factor 3 isoform 2 [Homo
           sapiens]
          Length = 415

 Score =  849 bits (2193), Expect = 0.0
 Identities = 415/415 (100%), Positives = 415/415 (100%)

Query: 1   MRIPVDPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLA 60
           MRIPVDPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLA
Sbjct: 1   MRIPVDPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLA 60

Query: 61  DHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAE 120
           DHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAE
Sbjct: 61  DHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAE 120

Query: 121 LRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREP 180
           LRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREP
Sbjct: 121 LRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREP 180

Query: 181 RRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELN 240
           RRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELN
Sbjct: 181 RRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELN 240

Query: 241 PFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPAT 300
           PFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPAT
Sbjct: 241 PFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPAT 300

Query: 301 SRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRM 360
           SRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRM
Sbjct: 301 SRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRM 360

Query: 361 LASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 415
           LASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY
Sbjct: 361 LASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 415


>gi|72534652 runt-related transcription factor 3 isoform 1 [Homo
           sapiens]
          Length = 429

 Score =  839 bits (2168), Expect = 0.0
 Identities = 410/410 (100%), Positives = 410/410 (100%)

Query: 6   DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLADHAGE 65
           DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLADHAGE
Sbjct: 20  DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLADHAGE 79

Query: 66  LVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNAS 125
           LVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNAS
Sbjct: 80  LVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNAS 139

Query: 126 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQ 185
           AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQ
Sbjct: 140 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQ 199

Query: 186 KLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDP 245
           KLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDP
Sbjct: 200 KLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDP 259

Query: 246 RQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHH 305
           RQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHH
Sbjct: 260 RQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHH 319

Query: 306 TYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCT 365
           TYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCT
Sbjct: 320 TYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCT 379

Query: 366 SSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 415
           SSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY
Sbjct: 380 SSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 429


>gi|49574546 runt-related transcription factor 1 isoform AML1b [Homo
           sapiens]
          Length = 453

 Score =  486 bits (1251), Expect = e-137
 Identities = 275/472 (58%), Positives = 321/472 (68%), Gaps = 76/472 (16%)

Query: 1   MRIPVDPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLA 60
           MRIPVD STSRRFTPPS A       GKM E     +  A     G+ R   RSMV+VLA
Sbjct: 1   MRIPVDASTSRRFTPPSTAL----SPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLA 56

Query: 61  DHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAE 120
           DH GELVRTDSPNFLCSVLP+HWRCNKTLP+AFKVVALGDVPDGT+VTVMAGNDENYSAE
Sbjct: 57  DHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAE 116

Query: 121 LRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREP 180
           LRNA+A MKNQVARFNDLRFVGRSGRGKSFTLTITVFTNP QVATYHRAIK+TVDGPREP
Sbjct: 117 LRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREP 176

Query: 181 RRHRQKLEDQTKP----FPDRFGDLERLR---MRVTP----STPSPRGSLSTTSHFSSQP 229
           RRHRQKL+DQTKP    F +R  +LE+LR   MRV+P     TP+PR SL+ ++ F+ QP
Sbjct: 177 RRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQP 236

Query: 230 QTPIQGTSELNPFSDPRQFDRSF------------------------------------P 253
           Q+ +Q T ++ P S P  +D+S+                                     
Sbjct: 237 QSQMQDTRQIQP-SPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRLS 295

Query: 254 TLPTLT----ESRFP------DPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRF 303
           T P LT      +FP      DPRMHYPG    AF YS TP  TS   + ++ M + +R+
Sbjct: 296 TAPDLTAFSDPRQFPALPSISDPRMHYPG----AFTYSPTPV-TSGIGIGMSAMGSATRY 350

Query: 304 HHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLAS 363
            HTYLPPPYPG+ Q Q GPFQA+   YHLYYG S+GSYQFSMV     GG+RSP R+L  
Sbjct: 351 -HTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMV-----GGERSPPRILPP 404

Query: 364 CTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 415
           CT+++   A   L+NPSL  QSD VEA+GSHSNSPT ++   R++EAVWRPY
Sbjct: 405 CTNASTGSA---LLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY 453


>gi|19923198 runt-related transcription factor 1 isoform AML1c [Homo
           sapiens]
          Length = 480

 Score =  476 bits (1226), Expect = e-134
 Identities = 270/467 (57%), Positives = 316/467 (67%), Gaps = 76/467 (16%)

Query: 6   DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLADHAGE 65
           D STSRRFTPPS A       GKM E     +  A     G+ R   RSMV+VLADH GE
Sbjct: 33  DASTSRRFTPPSTAL----SPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPGE 88

Query: 66  LVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNAS 125
           LVRTDSPNFLCSVLP+HWRCNKTLP+AFKVVALGDVPDGT+VTVMAGNDENYSAELRNA+
Sbjct: 89  LVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNAT 148

Query: 126 AVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQ 185
           A MKNQVARFNDLRFVGRSGRGKSFTLTITVFTNP QVATYHRAIK+TVDGPREPRRHRQ
Sbjct: 149 AAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQ 208

Query: 186 KLEDQTKP----FPDRFGDLERLR---MRVTP----STPSPRGSLSTTSHFSSQPQTPIQ 234
           KL+DQTKP    F +R  +LE+LR   MRV+P     TP+PR SL+ ++ F+ QPQ+ +Q
Sbjct: 209 KLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQMQ 268

Query: 235 GTSELNPFSDPRQFDRSF------------------------------------PTLPTL 258
            T ++ P S P  +D+S+                                     T P L
Sbjct: 269 DTRQIQP-SPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRLSTAPDL 327

Query: 259 T----ESRFP------DPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYL 308
           T      +FP      DPRMHYPG    AF YS TP  TS   + ++ M + +R+ HTYL
Sbjct: 328 TAFSDPRQFPALPSISDPRMHYPG----AFTYSPTPV-TSGIGIGMSAMGSATRY-HTYL 381

Query: 309 PPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSA 368
           PPPYPG+ Q Q GPFQA+   YHLYYG S+GSYQFSMV     GG+RSP R+L  CT+++
Sbjct: 382 PPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMV-----GGERSPPRILPPCTNAS 436

Query: 369 ASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 415
              A   L+NPSL  QSD VEA+GSHSNSPT ++   R++EAVWRPY
Sbjct: 437 TGSA---LLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLEEAVWRPY 480


>gi|226442791 runt-related transcription factor 2 isoform b [Homo
           sapiens]
          Length = 499

 Score =  461 bits (1187), Expect = e-130
 Identities = 282/507 (55%), Positives = 321/507 (63%), Gaps = 124/507 (24%)

Query: 6   DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQ-------------------------- 39
           DPSTSRRF+PPS +       GKM + S  ++AQ                          
Sbjct: 20  DPSTSRRFSPPSSSLQ----PGKMSDVSPVVAAQQQQQQQQQQQQQQQQQQQQQQQEAAA 75

Query: 40  ---------AAVGPGGRARP--EVRSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKT 88
                    AA     R RP  + R+MV+++ADH  ELVRTDSPNFLCSVLPSHWRCNKT
Sbjct: 76  AAAAAAAAAAAAAAVPRLRPPHDNRTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKT 135

Query: 89  LPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGK 148
           LPVAFKVVALG+VPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGK
Sbjct: 136 LPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGK 195

Query: 149 SFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKP--FPDRFGDLERL-- 204
           SFTLTITVFTNP QVATYHRAIKVTVDGPREPRRHRQKL+D +KP  F DR  DL R+  
Sbjct: 196 SFTLTITVFTNPPQVATYHRAIKVTVDGPREPRRHRQKLDD-SKPSLFSDRLSDLGRIPH 254

Query: 205 -RMRVTPSTPSPRGSL-STTSHFSSQPQ-------------------------------- 230
             MRV     +PR SL S  S F+ Q Q                                
Sbjct: 255 PSMRVGVPPQNPRPSLNSAPSPFNPQGQSQITDPRQAQSSPPWSYDQSYPSYLSQMTSPS 314

Query: 231 ----TPIQGT------------------SELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 268
               TP+  T                  SEL PFSDPRQ    FP++ +LTESRF +PRM
Sbjct: 315 IHSTTPLSSTRGTGLPAITDVPRRISGASELGPFSDPRQ----FPSISSLTESRFSNPRM 370

Query: 269 HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 328
           HYP    A F Y  TP  TS  SL   GM AT+ + HTYLPPPYPG+ Q+QSGPFQ + +
Sbjct: 371 HYP----ATFTY--TPPVTSGMSL---GMSATTHY-HTYLPPPYPGSSQSQSGPFQTSST 420

Query: 329 PYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGV 388
           PY LYYGTSSGSYQF MV     GGDRSP+RML  CT+++       L+NP+L  Q+DGV
Sbjct: 421 PY-LYYGTSSGSYQFPMV----PGGDRSPSRMLPPCTTTS---NGSTLLNPNLPNQNDGV 472

Query: 389 EADGSHSNSPTALSTPGRMDEAVWRPY 415
           +ADGSHS+SPT L++ GRMDE+VWRPY
Sbjct: 473 DADGSHSSSPTVLNSSGRMDESVWRPY 499


>gi|66934969 runt-related transcription factor 2 isoform c [Homo
           sapiens]
          Length = 507

 Score =  436 bits (1120), Expect = e-122
 Identities = 275/528 (52%), Positives = 318/528 (60%), Gaps = 134/528 (25%)

Query: 1   MRIPVDPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQ--------------------- 39
           MRIPVDPSTSRRF+PPS +       GKM + S  ++AQ                     
Sbjct: 1   MRIPVDPSTSRRFSPPSSSLQ----PGKMSDVSPVVAAQQQQQQQQQQQQQQQQQQQQQQ 56

Query: 40  --------------AAVGPGGRARP--EVRSMVDVLADHAGELVRTDSPNFLCSVLPSHW 83
                         AA     R RP  + R+MV+++ADH  ELVRTDSPNFLCSVLPSHW
Sbjct: 57  QEAAAAAAAAAAAAAAAAAVPRLRPPHDNRTMVEIIADHPAELVRTDSPNFLCSVLPSHW 116

Query: 84  RCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGR 143
           RCNKTLPVAFKVVALG+VPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGR
Sbjct: 117 RCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGR 176

Query: 144 SGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKP--FPDRFGDL 201
           SGRGKSFTLTITVFTNP QVATYHRAIKVTVDGPREPRRHRQKL+D +KP  F DR  DL
Sbjct: 177 SGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRRHRQKLDD-SKPSLFSDRLSDL 235

Query: 202 ERL---RMRVTPSTPSPRGSL-STTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPT--- 254
            R+    MRV     +PR SL S  S F+ Q Q+ I    +    S P  +D+S+P+   
Sbjct: 236 GRIPHPSMRVGVPPQNPRPSLNSAPSPFNPQGQSQITDPRQAQS-SPPWSYDQSYPSYLS 294

Query: 255 --------------------LPTLTE---------------------------------S 261
                               LP +T+                                  
Sbjct: 295 QMTSPSIHSTTPLSSTRGTGLPAITDVPRRISDDDTATSDFCLWPSTLSKKSQAGASELG 354

Query: 262 RFPDPRMHYPGAMS--------------AAFPYSATPSGTSISSLSVAGMPATSRFHHTY 307
            F DPR  +P   S              A F Y  TP  TS  SL   GM AT+ + HTY
Sbjct: 355 PFSDPR-QFPSISSLTESRFSNPRMHYPATFTY--TPPVTSGMSL---GMSATTHY-HTY 407

Query: 308 LPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSS 367
           LPPPYPG+ Q+QSGPFQ + +PY LYYGTSSGSYQF MV     GGDRSP+RML  CT++
Sbjct: 408 LPPPYPGSSQSQSGPFQTSSTPY-LYYGTSSGSYQFPMV----PGGDRSPSRMLPPCTTT 462

Query: 368 AASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 415
           +       L+NP+L  Q+DGV+ADGSHS+SPT L++ GRMDE+VWRPY
Sbjct: 463 S---NGSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMDESVWRPY 507


>gi|226442783 runt-related transcription factor 2 isoform a [Homo
           sapiens]
          Length = 521

 Score =  426 bits (1095), Expect = e-119
 Identities = 270/523 (51%), Positives = 313/523 (59%), Gaps = 134/523 (25%)

Query: 6   DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQ-------------------------- 39
           DPSTSRRF+PPS +       GKM + S  ++AQ                          
Sbjct: 20  DPSTSRRFSPPSSSLQ----PGKMSDVSPVVAAQQQQQQQQQQQQQQQQQQQQQQQEAAA 75

Query: 40  ---------AAVGPGGRARP--EVRSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKT 88
                    AA     R RP  + R+MV+++ADH  ELVRTDSPNFLCSVLPSHWRCNKT
Sbjct: 76  AAAAAAAAAAAAAAVPRLRPPHDNRTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKT 135

Query: 89  LPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGK 148
           LPVAFKVVALG+VPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGK
Sbjct: 136 LPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGK 195

Query: 149 SFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKP--FPDRFGDLERL-- 204
           SFTLTITVFTNP QVATYHRAIKVTVDGPREPRRHRQKL+D +KP  F DR  DL R+  
Sbjct: 196 SFTLTITVFTNPPQVATYHRAIKVTVDGPREPRRHRQKLDD-SKPSLFSDRLSDLGRIPH 254

Query: 205 -RMRVTPSTPSPRGSL-STTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPT-------- 254
             MRV     +PR SL S  S F+ Q Q+ I    +    S P  +D+S+P+        
Sbjct: 255 PSMRVGVPPQNPRPSLNSAPSPFNPQGQSQITDPRQAQS-SPPWSYDQSYPSYLSQMTSP 313

Query: 255 ---------------LPTLTE---------------------------------SRFPDP 266
                          LP +T+                                   F DP
Sbjct: 314 SIHSTTPLSSTRGTGLPAITDVPRRISDDDTATSDFCLWPSTLSKKSQAGASELGPFSDP 373

Query: 267 RMHYPGAMS--------------AAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPY 312
           R  +P   S              A F Y  TP  TS  SL   GM AT+ + HTYLPPPY
Sbjct: 374 R-QFPSISSLTESRFSNPRMHYPATFTY--TPPVTSGMSL---GMSATTHY-HTYLPPPY 426

Query: 313 PGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVA 372
           PG+ Q+QSGPFQ + +PY LYYGTSSGSYQF MV     GGDRSP+RML  CT+++    
Sbjct: 427 PGSSQSQSGPFQTSSTPY-LYYGTSSGSYQFPMV----PGGDRSPSRMLPPCTTTS---N 478

Query: 373 AGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 415
              L+NP+L  Q+DGV+ADGSHS+SPT L++ GRMDE+VWRPY
Sbjct: 479 GSTLLNPNLPNQNDGVDADGSHSSSPTVLNSSGRMDESVWRPY 521


>gi|169790837 runt-related transcription factor 1 isoform AML1a
           [Homo sapiens]
          Length = 250

 Score =  334 bits (856), Expect = 1e-91
 Identities = 176/245 (71%), Positives = 196/245 (80%), Gaps = 15/245 (6%)

Query: 1   MRIPVDPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRARPEVRSMVDVLA 60
           MRIPVD STSRRFTPPS A       GKM E     +  A     G+ R   RSMV+VLA
Sbjct: 1   MRIPVDASTSRRFTPPSTAL----SPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLA 56

Query: 61  DHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAE 120
           DH GELVRTDSPNFLCSVLP+HWRCNKTLP+AFKVVALGDVPDGT+VTVMAGNDENYSAE
Sbjct: 57  DHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAE 116

Query: 121 LRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREP 180
           LRNA+A MKNQVARFNDLRFVGRSGRGKSFTLTITVFTNP QVATYHRAIK+TVDGPREP
Sbjct: 117 LRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREP 176

Query: 181 RRHRQKLEDQTKP----FPDRFGDLERLR---MRVTP----STPSPRGSLSTTSHFSSQP 229
           RRHRQKL+DQTKP    F +R  +LE+LR   MRV+P     TP+PR SL+ ++ F+ QP
Sbjct: 177 RRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQP 236

Query: 230 QTPIQ 234
           Q+ +Q
Sbjct: 237 QSQMQ 241


>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
            potassium channel 4 [Homo sapiens]
          Length = 1203

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 59/216 (27%), Positives = 73/216 (33%), Gaps = 35/216 (16%)

Query: 209  TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDR----------SFPTLPTL 258
            +P+ P  RG L    HF   P       S  +P S P Q  +          + P     
Sbjct: 942  SPAPPGARGGLGLPEHFLPPP------PSSRSPSSSPGQLGQPPGELSLGLATGPLSTPE 995

Query: 259  TESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPAT--------SRFHHTYLPP 310
            T  R P+P     GA   A P   TP G         G P T        S  H + L P
Sbjct: 996  TPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLP 1055

Query: 311  PYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAAS 370
            P    P  Q    +  P    L  G  +   +    +  +   D + T   AS  SS  S
Sbjct: 1056 PASSPPPPQVPQRRGTPP---LTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSSGES 1112

Query: 371  VAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGR 406
            +AA  L  P  GG S G       S S   L  PGR
Sbjct: 1113 MAAFPLF-PRAGGGSGG-------SGSSGGLGPPGR 1140



 Score = 30.0 bits (66), Expect = 4.0
 Identities = 40/149 (26%), Positives = 58/149 (38%), Gaps = 30/149 (20%)

Query: 269 HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 328
           H+P   +A F     P G+ + +L     P   +   + +P    G+    S P Q +  
Sbjct: 797 HHPRLPAAIF---RPPPGSGLGNLGAGQTPRHLKRLQSLIPSAL-GSASPASSPSQVDTP 852

Query: 329 PYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGV 388
                   SS S+    +AG S+    SP  +L S +SS    A G   +PS    S GV
Sbjct: 853 --------SSSSFHIQQLAGFSAPAGLSP--LLPSSSSSPPPGACG---SPSAPTPSAGV 899

Query: 389 EA-------------DGSHSNSPTALSTP 404
            A              GS S+S + L TP
Sbjct: 900 AATTIAGFGHFHKALGGSLSSSDSPLLTP 928


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 49/213 (23%), Positives = 78/213 (36%), Gaps = 31/213 (14%)

Query: 177  PREPRRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGT 236
            PR P    +++  +T P       L+R R R  PS PS     S  +   S         
Sbjct: 2383 PRVPLSAYERVSGRTSP-----PLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQ 2437

Query: 237  SELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAG 296
            S L P  D               + R P P      +       +      S+SS +VA 
Sbjct: 2438 SLLPPAQD---------------QPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVAT 2482

Query: 297  MPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRS 356
              +++  H+  L  P PG P +  G   A           S+G+ Q S +A      +R 
Sbjct: 2483 TTSSAGDHNGMLSVPAPGVPHSDVGEPPA-----------STGAQQPSALAALQPAKERR 2531

Query: 357  PTRMLASCTSSAASVAAGNLMNPSLGGQSDGVE 389
             +   +S +SS++S ++ +  + S G  S   E
Sbjct: 2532 SSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSE 2564



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 47/204 (23%), Positives = 77/204 (37%), Gaps = 17/204 (8%)

Query: 188  EDQTK-PFPDRFGDLER-LRMRVTPSTPSPR---GSLSTTSHFSSQ---------PQTPI 233
            +DQ + P P  F D  R L  + TP   S     G+++TT+  +           P  P 
Sbjct: 2444 QDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPH 2503

Query: 234  QGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPS--GTSISS 291
                E  P S   Q   +   L    E R          + S++   S++ S  G+S S 
Sbjct: 2504 SDVGE-PPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSD 2562

Query: 292  LSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSS 351
               + +P         +P P P   +         P+P      +SS S   S  + SSS
Sbjct: 2563 SEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSS 2622

Query: 352  GGDRSPTRMLASCTSSAASVAAGN 375
                S +   +S +SS++S ++ +
Sbjct: 2623 SSSSSSSSSSSSSSSSSSSSSSSS 2646



 Score = 31.2 bits (69), Expect = 1.8
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 14/135 (10%)

Query: 207  RVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLT------- 259
            R + S+ S   S S++S  SS   +    +S+    S P Q + +   +P+ T       
Sbjct: 2531 RSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAV 2590

Query: 260  -ESRFPDP------RMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPY 312
             E R P+P      R     + S++   S++ S +S SS S +   ++S    +    P 
Sbjct: 2591 REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650

Query: 313  PGAPQNQSGPFQANP 327
            P  P  Q+ P  A+P
Sbjct: 2651 PAKPGPQALPKPASP 2665



 Score = 28.9 bits (63), Expect = 9.0
 Identities = 54/237 (22%), Positives = 88/237 (37%), Gaps = 58/237 (24%)

Query: 205  RMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFP 264
            RM   P+ P P  SL T    +   + P    + +N  S       + PT   L +SR P
Sbjct: 2207 RMSQVPA-PVPLMSLRTAPAANLASRIPAASAAAMNLASARTP---AIPTAVNLADSRTP 2262

Query: 265  -----------------------DPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATS 301
                                   DPR   P A +     + TP+  +  SL+ +G P T+
Sbjct: 2263 AAAAAMNLASPRTAVAPSAVNLADPRT--PTAPAVNLAGARTPAALAALSLTGSGTPPTA 2320

Query: 302  RFHHTYLPPPYPGAPQNQSGPFQAN-PSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRM 360
              + +    P   A  N  GP  A+  +P +              +AGS +    +P   
Sbjct: 2321 ANYPSSSRTPQAPASANLVGPRSAHATAPVN--------------IAGSRTAAALAP--- 2363

Query: 361  LASCTSS--AASVAAGNLMNP--------SLGGQSDGVEADGSHSNSPTALSTPGRM 407
             AS TS+  A +++  NL +P         + G++     D + S +P +  +  RM
Sbjct: 2364 -ASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRM 2419


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 12/127 (9%)

Query: 195  PDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPT 254
            P ++G     R    PST  PR +  TT+  S+ PQ P++G   +  FS   +   +   
Sbjct: 1429 PVQYGQKPEGRTVAFPSTHPPRTAAPTTA--SAAPQGPLRGRPPIATFSANPEAKAAAAP 1486

Query: 255  LPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPG 314
              T +++    PR H P + S+     A P+     + + A  P          PPP P 
Sbjct: 1487 FQT-SQASASAPR-HQPASASSTAASPAHPAKLRAQTTAQASTPGQ--------PPPQPQ 1536

Query: 315  APQNQSG 321
            AP + +G
Sbjct: 1537 APSHAAG 1543


>gi|206597509 HIV-1 Rev binding protein isoform 4 [Homo sapiens]
          Length = 522

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 50/210 (23%), Positives = 75/210 (35%), Gaps = 16/210 (7%)

Query: 190 QTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQT-PIQGTSELNPFSDPRQF 248
           Q+    D++  L  L    + +  S     ST++  S+   T P+  +++  P S     
Sbjct: 326 QSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPASS---- 381

Query: 249 DRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYL 308
             S P     T S  P      P   S+  P+     G + ++   A M   + F     
Sbjct: 382 --SVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFG---T 436

Query: 309 PPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSA 368
           P PY   P + SG FQ    P    +   +   Q    AG ++ G   P       T   
Sbjct: 437 PAPY-SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPV-----VTPFG 490

Query: 369 ASVAAGNLMNPSLGGQSDGVEADGSHSNSP 398
              AAG   NP + G   G    GS S +P
Sbjct: 491 QVAAAGVSSNPFMTGAPTGQFPTGSSSTNP 520


>gi|38570132 HIV-1 Rev binding protein isoform 2 [Homo sapiens]
          Length = 562

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 50/210 (23%), Positives = 75/210 (35%), Gaps = 16/210 (7%)

Query: 190 QTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQT-PIQGTSELNPFSDPRQF 248
           Q+    D++  L  L    + +  S     ST++  S+   T P+  +++  P S     
Sbjct: 366 QSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPASS---- 421

Query: 249 DRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYL 308
             S P     T S  P      P   S+  P+     G + ++   A M   + F     
Sbjct: 422 --SVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAATFGTASMSMPTGFG---T 476

Query: 309 PPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSA 368
           P PY   P + SG FQ    P    +   +   Q    AG ++ G   P       T   
Sbjct: 477 PAPY-SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPV-----VTPFG 530

Query: 369 ASVAAGNLMNPSLGGQSDGVEADGSHSNSP 398
              AAG   NP + G   G    GS S +P
Sbjct: 531 QVAAAGVSSNPFMTGAPTGQFPTGSSSTNP 560


>gi|116284392 mucin 2 precursor [Homo sapiens]
          Length = 5179

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 55/215 (25%), Positives = 83/215 (38%), Gaps = 54/215 (25%)

Query: 208  VTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPT------LPTLTES 261
            VTP TP+P G+ + T+       TPI  T+ + P   P       PT      +  LT S
Sbjct: 4161 VTP-TPTPTGTQTPTT-------TPITTTTTVTPTPTPTGTQTGPPTHTSTAPIAELTTS 4212

Query: 262  RFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVA-GMPATSRFHHTYLPPPYPGAPQNQS 320
              P        + S + P   T S T +S+L  A  M +T+       PP  P AP   S
Sbjct: 4213 NPPPESSTPQTSRSTSSPL--TESTTLLSTLPPAIEMTSTA-------PPSTPTAPTTTS 4263

Query: 321  GPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPS 380
            G    +P P      +++ S   +   G+++G   +PT      T+++A           
Sbjct: 4264 GGHTLSPPP------STTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSA----------- 4306

Query: 381  LGGQSDGVEADGSHSNSPTALSTPGRMDEAVWRPY 415
                          + +PT LSTP  +     RPY
Sbjct: 4307 -------------WTPTPTPLSTPSIIRTTGLRPY 4328



 Score = 34.7 bits (78), Expect = 0.16
 Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 11/121 (9%)

Query: 209  TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 268
            T +TPSP    +TT   ++ P  P   T+   P + P     +  T PT T +  P    
Sbjct: 1582 TTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTP 1641

Query: 269  HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 328
              P   +   P + TPS  + ++ S    P T+    T  PPP        S P    PS
Sbjct: 1642 SPPPTTTTTPPPTTTPSPPTTTTPS---PPITT----TTTPPP----TTTPSSPITTTPS 1690

Query: 329  P 329
            P
Sbjct: 1691 P 1691



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 7/124 (5%)

Query: 211  STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHY 270
            +TPSP  + +TT   ++ P  PI  T+   P + P     S  T P  T +  P      
Sbjct: 1420 TTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSP-PISTTTTPPPTTTPSPPTTTPS 1478

Query: 271  PGAMSAAFP--YSATPSGTSISSLSVAGMPATSRFHHTYLPP---PYPGAPQNQSGPFQA 325
            P   + + P   + TP  T+  S      P T     T LPP   P P      + P   
Sbjct: 1479 PPTTTPSPPTTTTTTPPPTTTPSPPTT-TPITPPASTTTLPPTTTPSPPTTTTTTPPPTT 1537

Query: 326  NPSP 329
             PSP
Sbjct: 1538 TPSP 1541



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 13/126 (10%)

Query: 209  TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 268
            +P T +P    +T S  ++   TP   T+   P + P     S  TLP  T    P    
Sbjct: 1471 SPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTT 1530

Query: 269  HYPGAMSAAFPYSATP-----SGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPF 323
              P   +   P + TP     S T++   +    P T+    T  PPP        S P 
Sbjct: 1531 TTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT----TTTPPP----TTTPSPPT 1582

Query: 324  QANPSP 329
               PSP
Sbjct: 1583 TTTPSP 1588



 Score = 30.4 bits (67), Expect = 3.1
 Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 14/125 (11%)

Query: 209  TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 268
            TP TP    + +TT   ++ P  P   T+   P + P     + P+ PT+T +  P    
Sbjct: 1545 TPITPP---TSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTT 1601

Query: 269  HYPGAMSAAF-PYSATPSGTSISSLSVAGMPATSRFHHTYLPP---PYPGAPQNQSGPFQ 324
              P   +    P + TPS  + + ++    P TS    T LPP   P P      + P  
Sbjct: 1602 PSPPTTTTTTPPPTTTPSPPTTTPIT----PPTST---TTLPPTTTPSPPPTTTTTPPPT 1654

Query: 325  ANPSP 329
              PSP
Sbjct: 1655 TTPSP 1659



 Score = 29.6 bits (65), Expect = 5.3
 Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 209  TPS-TPSPRGSLSTTSHFSSQPQTPIQGTS--ELNPFSDPRQ 247
            TPS TP+P  S  T S  SS P  P  GT   E   F  PRQ
Sbjct: 4379 TPSPTPTPSKSTPTPSKPSSTPSKPTPGTKPPECPDFDPPRQ 4420


>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
          Length = 5765

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 57/208 (27%), Positives = 73/208 (35%), Gaps = 42/208 (20%)

Query: 209  TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 268
            T  TP P  SL TT    SQ  TP    S   P S P     S     T T +       
Sbjct: 1981 TSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTT------- 2033

Query: 269  HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 328
               GA  +     ATPS T   +     +P T+    T  P   PG             +
Sbjct: 2034 ---GATGSV----ATPSSTP-GTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTT 2085

Query: 329  PYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDG- 387
            P      T+ G    S V  SS  G      +L   T++  +VA G++  PS   Q+ G 
Sbjct: 2086 P------TTRG----STVTPSSIPGTTHTATVL---TTTTTTVATGSMATPSSSTQTSGT 2132

Query: 388  ----------VEADGSHSNSPTALSTPG 405
                      + A GS +N     STPG
Sbjct: 2133 PPSLTTTATTITATGSTTNPS---STPG 2157



 Score = 37.0 bits (84), Expect = 0.033
 Identities = 56/238 (23%), Positives = 82/238 (34%), Gaps = 51/238 (21%)

Query: 211  STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFD-----RSFPTLPTLTE-SRFP 264
            +T S   + + T H S+   TP   +S+  PFS P         RS  T PT T  +  P
Sbjct: 2485 ATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIP 2544

Query: 265  DPRMHY-----------PGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 313
               +                MS A P S+TP     S++       T        P   P
Sbjct: 2545 SSSLGTTWTRLSQTTTPTATMSTATP-SSTPETVHTSTVLTTTATTTGATGSVATPSSTP 2603

Query: 314  GAPQN---------------QSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 358
            G                    S P  A   P  +   T+  +   ++   S  G   +PT
Sbjct: 2604 GTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPT 2663

Query: 359  RMLASCTSSAASVAAGNLMNPSLGGQSDG-----------VEADGSHSNSPTALSTPG 405
             +    T++  +VA G++  PS   Q+ G           + A GS +N     STPG
Sbjct: 2664 VL----TTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPS---STPG 2714



 Score = 37.0 bits (84), Expect = 0.033
 Identities = 56/238 (23%), Positives = 82/238 (34%), Gaps = 51/238 (21%)

Query: 211  STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFD-----RSFPTLPTLTE-SRFP 264
            +T S   + + T H S+   TP   +S+  PFS P         RS  T PT T  +  P
Sbjct: 3742 ATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIP 3801

Query: 265  DPRMHY-----------PGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 313
               +                MS A P S+TP     S++       T        P   P
Sbjct: 3802 SSSLGTTWTRLSQTTTPTATMSTATP-SSTPETAHTSTVLTTTATTTRATGSVATPSSTP 3860

Query: 314  GAPQN---------------QSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 358
            G                    S P  A   P  +   T+  +   ++   S  G   +PT
Sbjct: 3861 GTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTHTPT 3920

Query: 359  RMLASCTSSAASVAAGNLMNPSLGGQSDG-----------VEADGSHSNSPTALSTPG 405
             +    T++  +VA G++  PS   Q+ G           + A GS +N     STPG
Sbjct: 3921 VL----TTTTTTVATGSMATPSSSTQTSGTPPSLITTATTITATGSTTNPS---STPG 3971



 Score = 35.4 bits (80), Expect = 0.096
 Identities = 45/194 (23%), Positives = 70/194 (36%), Gaps = 21/194 (10%)

Query: 209  TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 268
            T  TP P  +L TT     Q  TP+   S ++P S P     S       T +R      
Sbjct: 3067 TSFTPIPSFTLGTTGTLPEQTTTPMATMSTIHPSSTPETTHTSTVLTTKATTTR------ 3120

Query: 269  HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 328
                A S+    S+TP  T I +        T+    T  P   PG     + P      
Sbjct: 3121 ----ATSSMSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTTWILTEPST---- 3172

Query: 329  PYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGV 388
                   T++ +      A +SS    + T  + + T++  +V +      S  G +  +
Sbjct: 3173 -------TATVTVPTGSTATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATAL 3225

Query: 389  EADGSHSNSPTALS 402
             A  S + +PTA S
Sbjct: 3226 PALRSTATTPTATS 3239



 Score = 34.3 bits (77), Expect = 0.21
 Identities = 61/242 (25%), Positives = 86/242 (35%), Gaps = 54/242 (22%)

Query: 211  STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFD-----RSFPTLPTLTE-SRFP 264
            +T S   + + T H S+   TP   +S+  P S P         RS  T PT T  +  P
Sbjct: 4470 ATASSTQATAGTPHVSTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIP 4529

Query: 265  DPRMHY-----------PGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 313
               +                MS A P S+TP     S++  A    T        P   P
Sbjct: 4530 SSSLGTTWTRLSQTTTPTATMSTATP-SSTPETVHTSTVLTATATTTGATGSVATPSSTP 4588

Query: 314  G------APQNQSGPFQANPS---------PYHLYY----GTSSGSYQFSMVAGSSSGGD 354
            G       P   +  F A PS         P  +       T++ +   S V  SS  G 
Sbjct: 4589 GTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGT 4648

Query: 355  RSPTRMLASCTSSAASVAAGNLMNPSLGGQSDG-----------VEADGSHSNSPTALST 403
                R+L   T++  +VA G++  PS   Q+ G           + A GS +N     ST
Sbjct: 4649 THTARVL---TTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPS---ST 4702

Query: 404  PG 405
            PG
Sbjct: 4703 PG 4704



 Score = 33.9 bits (76), Expect = 0.28
 Identities = 29/106 (27%), Positives = 38/106 (35%), Gaps = 10/106 (9%)

Query: 209  TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 268
            T  TP P  +L TT     Q  TP+   S ++P S P     S       T +R      
Sbjct: 4324 TSVTPIPSSTLGTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTKATTTR------ 4377

Query: 269  HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPG 314
                A S+    S+TP  T I +        T+    T  P   PG
Sbjct: 4378 ----ATSSTSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPG 4419



 Score = 33.1 bits (74), Expect = 0.48
 Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 17/187 (9%)

Query: 209  TPSTPSPRGSLST--TSHFSSQPQTPIQGTSELNPFSDPRQFDRSFP---------TLPT 257
            TP+T S     ST  T+   ++P T    T+     + P    R+ P         T PT
Sbjct: 1891 TPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTATTPT 1950

Query: 258  LTESRF-PDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPAT-SRFHHTYLPPPYPGA 315
            +T S+  P        A+ A    + TP+ TS++ +  + +  T +R   T  P      
Sbjct: 1951 VTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTATMST 2010

Query: 316  PQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCT---SSAASVA 372
                S P  A+ S       T++G+   S+   SS+ G    T++  + T   ++  S +
Sbjct: 2011 ATPSSTPETAHTSTVLTATATTTGA-TGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSS 2069

Query: 373  AGNLMNP 379
             G  + P
Sbjct: 2070 PGTALTP 2076


>gi|110431352 transducer of regulated CREB protein 3 isoform b [Homo
           sapiens]
          Length = 618

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 23/137 (16%)

Query: 211 STPSPRGSLSTT---SHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPT---------- 257
           S PS + +L+ T   S  ++ PQT +   S L+P    R F  S P+L T          
Sbjct: 329 SNPSIQATLNKTVLSSSLNNHPQTSVPNASALHP--SLRLFSLSNPSLSTTNLSGPSRRR 386

Query: 258 ------LTESRFPDPRMHYPGAMSAAFPYSATPSGTSISS-LSVAGMPATSRFHHTYLPP 310
                 LT S  P+    +   +S+  P +  P+   +SS  S      T        PP
Sbjct: 387 QPPVSPLTLSPGPEAHQGFSRQLSSTSPLAPYPTSQMVSSDRSQLSFLPTEAQAQVSPPP 446

Query: 311 PYPGAPQNQSGPFQANP 327
           PYP APQ  + P    P
Sbjct: 447 PYP-APQELTQPLLQQP 462


>gi|110431354 transducer of regulated CREB protein 3 isoform a [Homo
           sapiens]
          Length = 619

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 23/137 (16%)

Query: 211 STPSPRGSLSTT---SHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPT---------- 257
           S PS + +L+ T   S  ++ PQT +   S L+P    R F  S P+L T          
Sbjct: 329 SNPSIQATLNKTVLSSSLNNHPQTSVPNASALHP--SLRLFSLSNPSLSTTNLSGPSRRR 386

Query: 258 ------LTESRFPDPRMHYPGAMSAAFPYSATPSGTSISS-LSVAGMPATSRFHHTYLPP 310
                 LT S  P+    +   +S+  P +  P+   +SS  S      T        PP
Sbjct: 387 QPPVSPLTLSPGPEAHQGFSRQLSSTSPLAPYPTSQMVSSDRSQLSFLPTEAQAQVSPPP 446

Query: 311 PYPGAPQNQSGPFQANP 327
           PYP APQ  + P    P
Sbjct: 447 PYP-APQELTQPLLQQP 462


>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
          Length = 1094

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 30/169 (17%)

Query: 176 GPREPRRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQG 235
           G R P R  ++    +  +  + G         TP+ P    +    S   +QP  P + 
Sbjct: 566 GSRRPPRSPERTLSPSSGYSSQSG---------TPTLPPKGLAGPPASPGKAQPPKPERV 616

Query: 236 TSELNP--------------FSDPRQFDRSFPTLPTLTESRF---PDPRMHYPGAMSAAF 278
           TS  +P               SDP   DRS P + T    RF   P P++  P +   + 
Sbjct: 617 TSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPPSK 676

Query: 279 PYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANP 327
           P S  P+  ++++ +V   P ++    T   P  P  PQ    P Q +P
Sbjct: 677 PRSPNPAAPALAAPAVVPGPVST----TDASPQSPPTPQTTLTPLQESP 721



 Score = 29.3 bits (64), Expect = 6.9
 Identities = 39/182 (21%), Positives = 61/182 (33%), Gaps = 27/182 (14%)

Query: 217 GSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSA 276
           G +STT    + PQ+P    + L P  +     +     P+      P P  H P     
Sbjct: 695 GPVSTTD---ASPQSPPTPQTTLTPLQESPVISKDQSPPPS------PPPSYHPPPP--- 742

Query: 277 AFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGT 336
                 T     +     A   A         PPP P AP+ Q       P P   +   
Sbjct: 743 -----PTKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPPPEEAF--- 794

Query: 337 SSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSN 396
                 FS+ +   +G   SP  +++S  +S++S  A  +  P          A    S+
Sbjct: 795 ------FSVASPEPAGPSGSP-ELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASS 847

Query: 397 SP 398
           +P
Sbjct: 848 AP 849


>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
          Length = 1952

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 62/274 (22%), Positives = 99/274 (36%), Gaps = 71/274 (25%)

Query: 159 NPTQVATYHRAIKVTVDGPREPRR--HRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPR 216
           +P+ + T H + + T  G  E     H      QT  FP+               T S R
Sbjct: 728 SPSSIPTTHISARSTTSGLVEESTTYHSSPGSTQTMHFPES-------------DTTSGR 774

Query: 217 GSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSA 276
           G  STTSH S+                       +  + P+ T +   +P  ++    S 
Sbjct: 775 GEESTTSHSST---------------------THTISSAPSTTSALVEEPTSYHSSPGST 813

Query: 277 A---FPYSATPSGTSISSL-SVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHL 332
           A   FP S+T SG S  S+ S +   AT            P    N     ++  SP   
Sbjct: 814 ATTHFPDSSTTSGRSEESIASHSSQDATGTI-------VLPARSTNSVLLGESTTSP--- 863

Query: 333 YYGTSSGSYQFSMVAGSSS------------GGDRSPTRMLASCTSSAASVAAGNLMNPS 380
               SSGS + + + GS++               RSP   L+  +++++ V+  +  + S
Sbjct: 864 ---ISSGSMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHS 920

Query: 381 LGGQS------DGVEADGSHSNSPTALSTPGRMD 408
             G +      D     G   +S T+ S+PG  D
Sbjct: 921 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTD 954



 Score = 34.7 bits (78), Expect = 0.16
 Identities = 43/157 (27%), Positives = 58/157 (36%), Gaps = 14/157 (8%)

Query: 206  MRVTPSTPSPRGSLSTTSHF--SSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRF 263
            M   P+T S    LSTTSH   SS P T    +S     S+      S P  P  T S  
Sbjct: 1149 MPAPPTTTSAFVELSTTSHGSPSSIPTTHFSASSTTFGRSEESTTVHSSPVAPATTPS-- 1206

Query: 264  PDPRMHYPGAMSAAFPYSATPSGTSI----SSLSVAGMPATSRFHHTYLPPPYPGAPQNQ 319
               R    G +  +  Y ++P  T       S + +G    SR  H+         P   
Sbjct: 1207 -PARSTTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTT 1265

Query: 320  SGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRS 356
            S   +  P+ YH    +S GS   +    SS+   RS
Sbjct: 1266 SALVE-EPTSYH----SSPGSIATTHFPESSTTSGRS 1297


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
            sapiens]
          Length = 1560

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 59/234 (25%), Positives = 79/234 (33%), Gaps = 26/234 (11%)

Query: 177  PREPRRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGT 236
            P EP  H           P  F    +L +    S P+P            Q Q P +G 
Sbjct: 814  PSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPP-EGP 872

Query: 237  SELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATP--SGTSISSLSV 294
                P   P     +  +  + T SR P P    P      FP S  P  S T   +L +
Sbjct: 873  LPPAPHLPPSSTSSAVAS-SSETSSRLPAPT---PSDFQLQFPPSQGPHKSPTPPPTLHL 928

Query: 295  AGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHL---YYGTSSGSYQFSMVAGSSS 351
               PA         PPP P   Q  + PF A P P  L   ++   SG    +   G+ +
Sbjct: 929  VPEPAAP-------PPPPPRTFQMVTTPFPALPQPKALLERFHQVPSGIILQNKAGGAPA 981

Query: 352  GGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPG 405
                S +  L   TS AASV          G    G     SH+ +P  ++  G
Sbjct: 982  APQTSTS--LGPLTSPAASVLVS-------GQAPSGTPTAPSHAPAPAPMAATG 1026


>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
          Length = 355

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 40/132 (30%), Positives = 51/132 (38%), Gaps = 23/132 (17%)

Query: 210 PSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTL----------- 258
           P +PSP   +  T+H  + P  P    S+ + +S P       PT P             
Sbjct: 206 PYSPSPSLPVGPTAH-GALPPAPFPVVSQPSFYSGPLG-----PTYPAAQLGPRGAAGYS 259

Query: 259 -TESRFPDPRMHYPGA-MSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAP 316
            +  R   PR  YPG  M A+ P      G + S     G P  S +  T   PPYP  P
Sbjct: 260 WSPQRSMPPRPGYPGTPMGASGPGYPLRGGRAPSP----GYPQQSPYPATGGKPPYPIQP 315

Query: 317 QNQSGPFQANPS 328
           Q  S P Q  PS
Sbjct: 316 QLPSFPGQPQPS 327


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 49/179 (27%), Positives = 63/179 (35%), Gaps = 28/179 (15%)

Query: 209  TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 268
            T  TP P  SL TT    SQ  TP    S   P S P     S     T T +       
Sbjct: 2671 TSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTT------- 2723

Query: 269  HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 328
               GA  +     ATPS T   +     +P T+    T  P   PG             +
Sbjct: 2724 ---GATGSV----ATPSSTP-GTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTT 2775

Query: 329  PYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDG 387
            P      T+ G    S V  SS  G      +L   T++  +VA G++  PS   Q+ G
Sbjct: 2776 P------TTRG----STVTPSSIPGTTHTATVL---TTTTTTVATGSMATPSSSTQTSG 2821



 Score = 35.8 bits (81), Expect = 0.073
 Identities = 53/228 (23%), Positives = 78/228 (34%), Gaps = 39/228 (17%)

Query: 211  STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFD-----RSFPTLPTLTE-SRFP 264
            +T S   + + T H S+   TP   +S+  PFS P         RS  T PT T  +  P
Sbjct: 3120 ATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIP 3179

Query: 265  DPRMHY-----------PGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 313
               +                MS A P S+TP     S++       T        P   P
Sbjct: 3180 SSSLGTTWTRLSQTTTPTATMSTATP-SSTPETVHTSTVLTTTATTTGATGSVATPSSTP 3238

Query: 314  GAPQN---------------QSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 358
            G                    S P  A   P  +   T+  +   ++   S  G   +PT
Sbjct: 3239 GTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPT 3298

Query: 359  RMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGR 406
             +    T++  +VA G++  PS   Q+ G        N  T  +T GR
Sbjct: 3299 VL----TTTTTTVATGSMATPSSSTQTSGTTHTPPVPN--TTATTHGR 3340



 Score = 35.8 bits (81), Expect = 0.073
 Identities = 53/228 (23%), Positives = 78/228 (34%), Gaps = 39/228 (17%)

Query: 211  STPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFD-----RSFPTLPTLTE-SRFP 264
            +T S   + + T H S+   TP   +S+  PFS P         RS  T PT T  +  P
Sbjct: 4267 ATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIP 4326

Query: 265  DPRMHY-----------PGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP 313
               +                MS A P S+TP     S++       T        P   P
Sbjct: 4327 SSSLGTTWTRLSQTTTPTATMSTATP-SSTPETAHTSTVLTTTATTTRATGSVATPSSTP 4385

Query: 314  GAPQN---------------QSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 358
            G                    S P  A   P  +   T+  +   ++   S  G   +PT
Sbjct: 4386 GTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTHTPT 4445

Query: 359  RMLASCTSSAASVAAGNLMNPSLGGQSDGVEADGSHSNSPTALSTPGR 406
             +    T++  +VA G++  PS   Q+ G        N  T  +T GR
Sbjct: 4446 VL----TTTTTTVATGSMATPSSSTQTSGTTHTPPVPN--TTATTHGR 4487



 Score = 35.4 bits (80), Expect = 0.096
 Identities = 45/194 (23%), Positives = 70/194 (36%), Gaps = 21/194 (10%)

Query: 209  TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 268
            T  TP P  +L TT     Q  TP+   S ++P S P     S       T +R      
Sbjct: 3647 TSFTPIPSFTLGTTGTLPEQTTTPMATMSTIHPSSTPETTHTSTVLTTKATTTR------ 3700

Query: 269  HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPS 328
                A S+    S+TP  T I +        T+    T  P   PG     + P      
Sbjct: 3701 ----ATSSMSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPGTTWILTEPST---- 3752

Query: 329  PYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGV 388
                   T++ +      A +SS    + T  + + T++  +V +      S  G +  +
Sbjct: 3753 -------TATVTVPTGSTATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATAL 3805

Query: 389  EADGSHSNSPTALS 402
             A  S + +PTA S
Sbjct: 3806 PALRSTATTPTATS 3819



 Score = 33.9 bits (76), Expect = 0.28
 Identities = 29/106 (27%), Positives = 38/106 (35%), Gaps = 10/106 (9%)

Query: 209  TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 268
            T  TP P  +L TT     Q  TP+   S ++P S P     S       T +R      
Sbjct: 4794 TSVTPIPSSTLGTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTKATTTR------ 4847

Query: 269  HYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPG 314
                A S+    S+TP  T I +        T+    T  P   PG
Sbjct: 4848 ----ATSSTSTPSSTPGTTWILTELTTAATTTAATGPTATPSSTPG 4889



 Score = 33.1 bits (74), Expect = 0.48
 Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 17/187 (9%)

Query: 209  TPSTPSPRGSLST--TSHFSSQPQTPIQGTSELNPFSDPRQFDRSFP---------TLPT 257
            TP+T S     ST  T+   ++P T    T+     + P    R+ P         T PT
Sbjct: 2581 TPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTATTPT 2640

Query: 258  LTESRF-PDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPAT-SRFHHTYLPPPYPGA 315
            +T S+  P        A+ A    + TP+ TS++ +  + +  T +R   T  P      
Sbjct: 2641 VTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTATMST 2700

Query: 316  PQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCT---SSAASVA 372
                S P  A+ S       T++G+   S+   SS+ G    T++  + T   ++  S +
Sbjct: 2701 ATPSSTPETAHTSTVLTATATTTGA-TGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSS 2759

Query: 373  AGNLMNP 379
             G  + P
Sbjct: 2760 PGTALTP 2766


>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
          Length = 5478

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 55/220 (25%), Positives = 83/220 (37%), Gaps = 27/220 (12%)

Query: 206  MRVTPSTPSPRGSLSTTSHF--SSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRF 263
            M   P+T S    LSTTSH   SS P T    +S     S+      S P     T S  
Sbjct: 1842 MPAPPTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPS-- 1899

Query: 264  PDPRMHYPGAMSAAFPYSATPSGTSI----SSLSVAGMPATSRFHHTYLPPPYPGAPQNQ 319
               R    G +  +  Y ++P  T       S + +G    SR  H+         P   
Sbjct: 1900 -PARSTTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTT 1958

Query: 320  SGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNP 379
            S   +  P+ YH    +S GS   +    SS+   RS      S  S ++  A G ++ P
Sbjct: 1959 SALVE-EPTSYH----SSPGSTATTHFPDSSTTSGRSE----ESTASHSSQDATGTIVLP 2009

Query: 380  S-------LGGQSDGVEADGSHSNS--PTALSTPGRMDEA 410
            +       LG  +    + GS   +  P + +TPG  +++
Sbjct: 2010 ARSTTSVLLGESTTSPISSGSMETTALPGSTTTPGLSEKS 2049



 Score = 35.8 bits (81), Expect = 0.073
 Identities = 59/281 (20%), Positives = 102/281 (36%), Gaps = 57/281 (20%)

Query: 150  FTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKPFPDRFGDLERLRMRVT 209
            F+ + T      +  T H +   T   P   R     L +++  +    G  + +    +
Sbjct: 3428 FSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTTYHSSPGSTQTMHFPES 3487

Query: 210  PSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMH 269
             +T S RG  STTSH S+                       +  + P+ T +   +P  +
Sbjct: 3488 DTT-SGRGEESTTSHSST---------------------THTISSAPSTTSALVEEPTSY 3525

Query: 270  YPGAMSAA---FPYSATPSGTS-ISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQA 325
            +    S A   FP S+T SG S  S+ S +   AT       +  P         G    
Sbjct: 3526 HSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGT-----IVLPARSTTSVLLGESTT 3580

Query: 326  NPSPYHLYYGTSSGSYQFSMVAGSSS------------GGDRSPTRMLASCTSSAASVAA 373
            +P         SSGS + + + GS++               RSP   L+  +++++ V+ 
Sbjct: 3581 SP--------ISSGSMETTALPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVSE 3632

Query: 374  GNLMNPSLGGQS------DGVEADGSHSNSPTALSTPGRMD 408
             +  + S  G +      D     G   +S T+ S+PG  D
Sbjct: 3633 ESTTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTD 3673



 Score = 35.0 bits (79), Expect = 0.13
 Identities = 61/274 (22%), Positives = 98/274 (35%), Gaps = 71/274 (25%)

Query: 159  NPTQVATYHRAIKVTVDGPREPRR--HRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPR 216
            +P+ + T H + + T  G  E     H      QT  FP+               T S R
Sbjct: 807  SPSSIPTTHISARSTTSGLVEESTTYHSSPGSTQTMHFPES-------------DTTSGR 853

Query: 217  GSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSA 276
            G  STTSH S+                       +  + P+ T +   +P  ++    S 
Sbjct: 854  GEESTTSHSST---------------------THTISSAPSTTSALVEEPTSYHSSPGST 892

Query: 277  A---FPYSATPSGTS-ISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHL 332
            A   FP S+T SG S  S+ S +   AT       +  P         G    +P     
Sbjct: 893  ATTHFPDSSTTSGRSEESTASHSSQDATGT-----IVLPARSTTSVLLGESTTSP----- 942

Query: 333  YYGTSSGSYQFSMVAGSSS------------GGDRSPTRMLASCTSSAASVAAGNLMNPS 380
                SSGS + + + GS++               RSP   L+  +++++ V+  +  + S
Sbjct: 943  ---ISSGSMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRS 999

Query: 381  LGGQS------DGVEADGSHSNSPTALSTPGRMD 408
              G +      D     G   +S T+ S+PG  D
Sbjct: 1000 RPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTD 1033



 Score = 32.7 bits (73), Expect = 0.62
 Identities = 49/200 (24%), Positives = 78/200 (39%), Gaps = 27/200 (13%)

Query: 209  TPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRM 268
            TPS  SP  + +TT      P TP         ++ PR  D +     T +     +   
Sbjct: 2496 TPSRLSPSSTETTT--LPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESST 2553

Query: 269  HY--PGAM-SAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP-GAPQNQSGPFQ 324
             +  PG+  + AFP S T  G S  S +    P ++    T LP       P  +S    
Sbjct: 2554 SHSQPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGST--DTTLLPASTTTSGPSQESTTSH 2611

Query: 325  ANP----------SPYHLYYG-------TSSGSYQFSMVAGS--SSGGDRSPTRMLASCT 365
            ++P          S   L +G       +S GS   ++   S  SSG   + TR+ +S  
Sbjct: 2612 SSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTG 2671

Query: 366  SSAASVAAGNLMNPSLGGQS 385
            S   +++  +  +P L G+S
Sbjct: 2672 SPRTTLSPASSTSPGLQGES 2691



 Score = 32.3 bits (72), Expect = 0.81
 Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 8/175 (4%)

Query: 217  GSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSA 276
            G    ++ F   P +   G       +D  +   +FP+    T ++    R    G +  
Sbjct: 1352 GLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGLVGE 1411

Query: 277  AFPYSATPSGTSISSLSVAGMPATSRFHHT----YLPPPYPGAPQNQSGPFQANPSPYHL 332
            + P   +PS T  ++L   G P T          Y  P  P A  + +    +  S    
Sbjct: 1412 STPSRLSPSSTETTTL--PGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESS 1469

Query: 333  YYGTSSGSYQFSMVAGSSSGGDRS--PTRMLASCTSSAASVAAGNLMNPSLGGQS 385
               +  GS   +    S++  D S  PT   +S  S+ A+++ G+    SLG QS
Sbjct: 1470 TSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQS 1524



 Score = 32.3 bits (72), Expect = 0.81
 Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 8/175 (4%)

Query: 217  GSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSA 276
            G    ++ F   P +   G       +D  +   +FP+    T ++    R    G +  
Sbjct: 3992 GLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGLVGE 4051

Query: 277  AFPYSATPSGTSISSLSVAGMPATSRFHHT----YLPPPYPGAPQNQSGPFQANPSPYHL 332
            + P   +PS T  ++L   G P T          Y  P  P A  + +    +  S    
Sbjct: 4052 STPSRLSPSSTETTTLP--GSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESS 4109

Query: 333  YYGTSSGSYQFSMVAGSS--SGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQS 385
               +  GS   +    S+  SG  + PT   +S  S+ A+++ G+    SLG QS
Sbjct: 4110 TSHSQPGSTHTTAFPDSTTTSGLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQS 4164



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 51/247 (20%), Positives = 85/247 (34%), Gaps = 23/247 (9%)

Query: 145  GRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKPFPDRFGDLERL 204
            G  +  T   +     T+   + R+   +V G      H +     T  F +        
Sbjct: 2852 GLSEESTTVYSSSPGSTETTVFPRSTTTSVRGEEPTTFHSRPASTHTTLFTE-------- 2903

Query: 205  RMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFP 264
                  ST S  G    ++ F   P +   G       +D  +   +FP+    T +   
Sbjct: 2904 -----DSTTS--GLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTTLS 2956

Query: 265  DPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHT----YLPPPYPGAPQNQS 320
              R    G +  + P   +PS T  ++L   G P T          Y  P  P A  + +
Sbjct: 2957 PARSTTSGLVGESTPSRLSPSSTETTTLP--GSPTTPSLSEKSTTFYTSPRSPDATLSPA 3014

Query: 321  GPFQANPSPYHLYYGTSSGSYQFSMVAGSS--SGGDRSPTRMLASCTSSAASVAAGNLMN 378
                +  S       +  GS   +    S+  SG  + PT   +S  S+ A+++ G+   
Sbjct: 3015 TTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSGLSQEPTASHSSQGSTEATLSPGSTTA 3074

Query: 379  PSLGGQS 385
             SLG QS
Sbjct: 3075 SSLGQQS 3081



 Score = 29.6 bits (65), Expect = 5.3
 Identities = 57/232 (24%), Positives = 82/232 (35%), Gaps = 31/232 (13%)

Query: 188  EDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFS--------SQPQTPIQGTSEL 239
            E  T P     G +E   +  + +TP      STT H S        S   T   G SE 
Sbjct: 2020 ESTTSPISS--GSMETTALPGSTTTPG-LSEKSTTFHSSPRSPATTLSPASTTSSGVSEE 2076

Query: 240  NPFSDPRQFDRSFPTLPTLTE----SRFPDPRMHYPGAMSAAF-PYSATPSGTSISSLSV 294
            +  S  R         P  T     SR        PG+      P S T SG S  S + 
Sbjct: 2077 STTSHSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTS 2136

Query: 295  AGMPATSRFHHTYLPPPYPGAPQ--NQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSG 352
               P ++    T L P    A     +S  F ++P   H      S +         SSG
Sbjct: 2137 HSSPGST---DTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTT---------SSG 2184

Query: 353  GDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVEA-DGSHSNSPTALST 403
               + TR+ +S  S   +++  +  +P L G+S   +    S   +P+  ST
Sbjct: 2185 IVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPPST 2236



 Score = 29.6 bits (65), Expect = 5.3
 Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 25/145 (17%)

Query: 150  FTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKPFPDRFGDLERLRMRVT 209
            F+ + T      +  T H +   T   P   R     L +++  +    G  + +    +
Sbjct: 4511 FSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTTYHSSPGSTQTMHFPES 4570

Query: 210  PSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMH 269
             +T S RG  STTSH S+                       +  + P+ T +   +P  +
Sbjct: 4571 -NTTSGRGEESTTSHSST---------------------THTISSAPSTTSALVEEPTSY 4608

Query: 270  YPGAMSAA---FPYSATPSGTSISS 291
            +    S A   FP S+T SG S  S
Sbjct: 4609 HSSPGSTATTHFPDSSTTSGRSEES 4633


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 37.0 bits (84), Expect = 0.033
 Identities = 45/162 (27%), Positives = 61/162 (37%), Gaps = 27/162 (16%)

Query: 235 GTSELNPFSDPRQ--FDRSFPTLPTLT----ESRFPDPRMHY---------PGAMSAAFP 279
           G   L P++ P+Q   D  FP     +     S +P P   Y         PG+ +AA  
Sbjct: 188 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAA 247

Query: 280 YSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP---GAPQNQSGP----FQANPSPYHL 332
            S  P  +S S+ S +   A  RF       P     G PQ  + P       +PS    
Sbjct: 248 GSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARG 307

Query: 333 YYGTSSGSYQFSMVAGSSSGG-DRSPTRMLASCTSSAASVAA 373
           Y G   G Y      G   GG  + P  M + C  +AA+ AA
Sbjct: 308 YQGYPGGDYS----GGPQDGGAGKGPADMASQCWGAAAAAAA 345



 Score = 29.6 bits (65), Expect = 5.3
 Identities = 52/230 (22%), Positives = 73/230 (31%), Gaps = 33/230 (14%)

Query: 186  KLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDP 245
            K+E    P PD F   +  + +     PSP GS S        PQTP   +S +    D 
Sbjct: 1106 KIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQG-----PQTPQSTSSSMAEGGDL 1160

Query: 246  RQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHH 305
            +      P  P  T           P +     P  +  +   I      G  +T +  +
Sbjct: 1161 K------PPTPAST-----------PHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRN 1203

Query: 306  TYLPPPYPGAPQNQSG-----PFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRM 360
            +  P P      N S       ++ N  PY      + GS  F       +GG   P   
Sbjct: 1204 SMTPNPGYQPSMNTSDMMGRMSYEPNKDPYG-SMRKAPGSDPFMSSGQGPNGGMGDPYSR 1262

Query: 361  LASCTSSAASVAAGNLMNPSLGGQSDGVEAD---GSHSNSPTALSTPGRM 407
             A       +VA G   +   GG  D V  +   G   N  T    P  M
Sbjct: 1263 AAG--PGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLM 1310


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 37.0 bits (84), Expect = 0.033
 Identities = 45/162 (27%), Positives = 61/162 (37%), Gaps = 27/162 (16%)

Query: 235 GTSELNPFSDPRQ--FDRSFPTLPTLT----ESRFPDPRMHY---------PGAMSAAFP 279
           G   L P++ P+Q   D  FP     +     S +P P   Y         PG+ +AA  
Sbjct: 188 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAA 247

Query: 280 YSATPSGTSISSLSVAGMPATSRFHHTYLPPPYP---GAPQNQSGP----FQANPSPYHL 332
            S  P  +S S+ S +   A  RF       P     G PQ  + P       +PS    
Sbjct: 248 GSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARG 307

Query: 333 YYGTSSGSYQFSMVAGSSSGG-DRSPTRMLASCTSSAASVAA 373
           Y G   G Y      G   GG  + P  M + C  +AA+ AA
Sbjct: 308 YQGYPGGDYS----GGPQDGGAGKGPADMASQCWGAAAAAAA 345



 Score = 29.6 bits (65), Expect = 5.3
 Identities = 52/230 (22%), Positives = 73/230 (31%), Gaps = 33/230 (14%)

Query: 186  KLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDP 245
            K+E    P PD F   +  + +     PSP GS S        PQTP   +S +    D 
Sbjct: 1106 KIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQG-----PQTPQSTSSSMAEGGDL 1160

Query: 246  RQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHH 305
            +      P  P  T           P +     P  +  +   I      G  +T +  +
Sbjct: 1161 K------PPTPAST-----------PHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRN 1203

Query: 306  TYLPPPYPGAPQNQSG-----PFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPTRM 360
            +  P P      N S       ++ N  PY      + GS  F       +GG   P   
Sbjct: 1204 SMTPNPGYQPSMNTSDMMGRMSYEPNKDPYG-SMRKAPGSDPFMSSGQGPNGGMGDPYSR 1262

Query: 361  LASCTSSAASVAAGNLMNPSLGGQSDGVEAD---GSHSNSPTALSTPGRM 407
             A       +VA G   +   GG  D V  +   G   N  T    P  M
Sbjct: 1263 AAG--PGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLM 1310


>gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo
           sapiens]
          Length = 920

 Score = 37.0 bits (84), Expect = 0.033
 Identities = 45/158 (28%), Positives = 62/158 (39%), Gaps = 21/158 (13%)

Query: 232 PIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISS 291
           P QG+S L P + P  F  + P+ PTL E     P + Y          S  PS    S 
Sbjct: 745 PGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPPISY---------QSDIPSSLLTSE 795

Query: 292 LSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSS 351
            S A +P+         P   PG P   +    A P P  L++     + + S+  G +S
Sbjct: 796 KSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGP-QLHHSNPPPASRQSL--GQAS 852

Query: 352 GGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVE 389
            G   PT  L      A S A G +  PS+ G  +  E
Sbjct: 853 LG---PTGEL------AFSPATGVMGPPSMSGAGEAPE 881


>gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo
           sapiens]
          Length = 894

 Score = 37.0 bits (84), Expect = 0.033
 Identities = 45/158 (28%), Positives = 62/158 (39%), Gaps = 21/158 (13%)

Query: 232 PIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISS 291
           P QG+S L P + P  F  + P+ PTL E     P + Y          S  PS    S 
Sbjct: 719 PGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPPISY---------QSDIPSSLLTSE 769

Query: 292 LSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSS 351
            S A +P+         P   PG P   +    A P P  L++     + + S+  G +S
Sbjct: 770 KSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGP-QLHHSNPPPASRQSL--GQAS 826

Query: 352 GGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVE 389
            G   PT  L      A S A G +  PS+ G  +  E
Sbjct: 827 LG---PTGEL------AFSPATGVMGPPSMSGAGEAPE 855


>gi|5031887 LIM domain containing preferred translocation partner in
           lipoma [Homo sapiens]
          Length = 612

 Score = 36.6 bits (83), Expect = 0.043
 Identities = 41/166 (24%), Positives = 59/166 (35%), Gaps = 29/166 (17%)

Query: 208 VTPSTPSPRGSLSTTSHFSSQPQT---PIQGTSELNPFSDPRQFDRSFPTLPTLTESRF- 263
           V P+ P    +  +T      PQ    P+     L P   P+    S+ T  T +   F 
Sbjct: 165 VIPNQPPLTATKKSTLKPQPAPQAGPIPVAPIGTLKP--QPQPVPASYTTASTSSRPTFN 222

Query: 264 -----PDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGM--PATSR--FHHTYLPPPYPG 314
                  P  HY  A S+   Y + P G +   + V+G   P ++R    + Y+PPP   
Sbjct: 223 VQVKSAQPSPHYMAAPSSGQIYGSGPQGYNTQPVPVSGQCPPPSTRGGMDYAYIPPP--- 279

Query: 315 APQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGG--DRSPT 358
                       P P + Y       Y+    AG   GG  D  PT
Sbjct: 280 ---------GLQPEPGYGYAPNQGRYYEGYYAAGPGYGGRNDSDPT 316


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 36.2 bits (82), Expect = 0.056
 Identities = 52/203 (25%), Positives = 70/203 (34%), Gaps = 20/203 (9%)

Query: 210 PSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMH 269
           P+TP    S   +    ++P T   G   L     P  F    P LP     R  +    
Sbjct: 256 PTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASA 315

Query: 270 YPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSP 329
            P  + A       PS  ++    + G+P       T  P P+   P + S P      P
Sbjct: 316 SPPGLGAQPLPGHLPSPHAMGQ-GMGGLPPGPEKGPTLAPSPHSLPPASSSAP----APP 370

Query: 330 YHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVE 389
               Y +SS S   S  A SSS           S +SS+AS    +   PS    S    
Sbjct: 371 MRFPYSSSSSS---SAAASSSS-----------SSSSSSASPFPASQALPSY-PHSFPPP 415

Query: 390 ADGSHSNSPTALSTPGRMDEAVW 412
              S SN P   + P    +AVW
Sbjct: 416 TSLSVSNQPPKYTQPSLPSQAVW 438



 Score = 36.2 bits (82), Expect = 0.056
 Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 29/174 (16%)

Query: 192 KPFPDRFGDLERLRMRVTPSTPSPRGS-LSTTSHFSSQPQTPIQGTSELNPFSDPRQFDR 250
           +P+P     L     +V+ S   P G  +S++S+ SS         S  +P   P+    
Sbjct: 540 RPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPY 599

Query: 251 SFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPP 310
            FP +PT+T S                   SAT S T I+  +VA  PA  +      PP
Sbjct: 600 PFPPVPTVTTS-------------------SATLS-TVIA--TVASSPAGYKTASPPGPP 637

Query: 311 PY------PGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 358
           PY      PGA +  + P     SP     GT  G    S  AG  +    SPT
Sbjct: 638 PYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPT 691


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 36.2 bits (82), Expect = 0.056
 Identities = 52/203 (25%), Positives = 70/203 (34%), Gaps = 20/203 (9%)

Query: 210 PSTPSPRGSLSTTSHFSSQPQTPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPRMH 269
           P+TP    S   +    ++P T   G   L     P  F    P LP     R  +    
Sbjct: 256 PTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASA 315

Query: 270 YPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPPPYPGAPQNQSGPFQANPSP 329
            P  + A       PS  ++    + G+P       T  P P+   P + S P      P
Sbjct: 316 SPPGLGAQPLPGHLPSPHAMGQ-GMGGLPPGPEKGPTLAPSPHSLPPASSSAP----APP 370

Query: 330 YHLYYGTSSGSYQFSMVAGSSSGGDRSPTRMLASCTSSAASVAAGNLMNPSLGGQSDGVE 389
               Y +SS S   S  A SSS           S +SS+AS    +   PS    S    
Sbjct: 371 MRFPYSSSSSS---SAAASSSS-----------SSSSSSASPFPASQALPSY-PHSFPPP 415

Query: 390 ADGSHSNSPTALSTPGRMDEAVW 412
              S SN P   + P    +AVW
Sbjct: 416 TSLSVSNQPPKYTQPSLPSQAVW 438



 Score = 36.2 bits (82), Expect = 0.056
 Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 29/174 (16%)

Query: 192 KPFPDRFGDLERLRMRVTPSTPSPRGS-LSTTSHFSSQPQTPIQGTSELNPFSDPRQFDR 250
           +P+P     L     +V+ S   P G  +S++S+ SS         S  +P   P+    
Sbjct: 540 RPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPY 599

Query: 251 SFPTLPTLTESRFPDPRMHYPGAMSAAFPYSATPSGTSISSLSVAGMPATSRFHHTYLPP 310
            FP +PT+T S                   SAT S T I+  +VA  PA  +      PP
Sbjct: 600 PFPPVPTVTTS-------------------SATLS-TVIA--TVASSPAGYKTASPPGPP 637

Query: 311 PY------PGAPQNQSGPFQANPSPYHLYYGTSSGSYQFSMVAGSSSGGDRSPT 358
           PY      PGA +  + P     SP     GT  G    S  AG  +    SPT
Sbjct: 638 PYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPT 691


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.130    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,321,832
Number of Sequences: 37866
Number of extensions: 1051668
Number of successful extensions: 4678
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 4295
Number of HSP's gapped (non-prelim): 588
length of query: 415
length of database: 18,247,518
effective HSP length: 105
effective length of query: 310
effective length of database: 14,271,588
effective search space: 4424192280
effective search space used: 4424192280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.