Guide to the Human Genome
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Name: PRKAR1A Sequence: fasta or formatted (381aa) NCBI GI: 47132583
Description:

cAMP-dependent protein kinase, regulatory subunit alpha 1

Referenced in:

Adrenals
Cyclic Nucleotides

Other entries for this name:
alt mRNA [381aa] cAMP-dependent protein kinase, regulatory subunit alpha 1
alt mRNA [381aa] cAMP-dependent protein kinase, regulatory subunit alpha 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         31           2
 C cysteine            1.0          4           1
 D aspartate           5.8         22           2
 E glutamate          10.2         39           2
 F phenylalanine       4.2         16           2
 G glycine             6.3         24           2
 H histidine           0.5          2           1
 I isoleucine          5.5         21           2
 K lysine              5.8         22           1
 L leucine             8.1         31           2
 M methionine          1.8          7           1
 N asparagine          3.4         13           2
 P proline             4.2         16           4
 Q glutamine           3.9         15           2
 R arginine            8.1         31           4
 S serine              7.1         27           1
 T threonine           3.9         15           1
 V valine              7.9         30           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP-dependent protein kinase, regulatory subunit al... 
PRKAR1A               1.000   cAMP-dependent protein kinase, regulatory subunit al...
PRKAR1A               1.000   cAMP-dependent protein kinase, regulatory subunit alp...
PRKAR1B               0.834   protein kinase, cAMP-dependent, regulatory, type I, ...
PRKAR2A               0.292   cAMP-dependent protein kinase, regulatory subunit alp...
PRKAR2B               0.288   cAMP-dependent protein kinase, regulatory subunit be...
PRKG1                 0.196   protein kinase, cGMP-dependent, type I isoform 2 [Ho...
PRKG1                 0.190   protein kinase, cGMP-dependent, type I isoform 1 [H...
PRKG2                 0.168   protein kinase, cGMP-dependent, type II 
RAPGEF3               0.040   Rap guanine nucleotide exchange factor 3 isoform b ...
RAPGEF3               0.040   Rap guanine nucleotide exchange factor 3 isoform b [...
RAPGEF3               0.040   Rap guanine nucleotide exchange factor 3 isoform a ...
PNPLA7                0.040   patatin-like phospholipase domain containing 7 isof...
PNPLA7                0.040   patatin-like phospholipase domain containing 7 isof...
RAPGEF4               0.040   Rap guanine nucleotide exchange factor (GEF) 4 isof...
RAPGEF4               0.040   Rap guanine nucleotide exchange factor (GEF) 4 isof...
HCN4                  0.037   hyperpolarization activated cyclic nucleotide-gated p...
HCN2                  0.033   hyperpolarization activated cyclic nucleotide-gated...
HCN3                  0.033   hyperpolarization activated cyclic nucleotide-gated ...
HCN1                  0.033   hyperpolarization activated cyclic nucleotide-gated...
PNPLA6                0.032   patatin-like phospholipase domain containing 6 [Hom...
CNGB3                 0.023   cyclic nucleotide gated channel beta 3 
C20orf152             0.021   hypothetical protein LOC140894 
C19orf20              0.019   tubulin polyglutamylase complex subunit 1 
CNGA4                 0.019   cyclic nucleotide gated channel alpha 4 
CNGA3                 0.018   cyclic nucleotide gated channel alpha 3 isoform 2 [...
CNGA3                 0.018   cyclic nucleotide gated channel alpha 3 isoform 1 [Ho...
CNGB1                 0.015   cyclic nucleotide gated channel beta 1 isoform a [H...
CNGA1                 0.015   cyclic nucleotide gated channel alpha 1 isoform 1 [...
CNGA1                 0.015   cyclic nucleotide gated channel alpha 1 isoform 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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