Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PRKG1 Sequence: fasta or formatted (671aa) NCBI GI: 148612818
Description:

protein kinase, cGMP-dependent, type I isoform 1

Referenced in:

Cyclic Nucleotides
Gene Structure

Other entries for this name:
alt prot [686aa] protein kinase, cGMP-dependent, type I isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         37           2
 C cysteine            1.6         11           1
 D aspartate           6.7         45           2
 E glutamate           8.8         59           3
 F phenylalanine       5.2         35           2
 G glycine             6.9         46           2
 H histidine           1.9         13           1
 I isoleucine          7.3         49           2
 K lysine              8.8         59           2
 L leucine             8.9         60           2
 M methionine          2.4         16           2
 N asparagine          3.3         22           1
 P proline             4.0         27           3
 Q glutamine           2.7         18           2
 R arginine            4.9         33           1
 S serine              5.7         38           1
 T threonine           5.8         39           2
 V valine              5.2         35           2
 W tryptophan          1.2          8           1
 Y tyrosine            3.1         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase, cGMP-dependent, type I isoform 1 [H... 
PRKG1                 0.892   protein kinase, cGMP-dependent, type I isoform 2 [Ho...
PRKG2                 0.484   protein kinase, cGMP-dependent, type II 
PRKX                  0.200   protein kinase, X-linked 
PRKACB                0.191   cAMP-dependent protein kinase catalytic subunit beta ...
PRKACB                0.191   cAMP-dependent protein kinase catalytic subunit beta...
PRKACA                0.190   cAMP-dependent protein kinase catalytic subunit alph...
PRKACA                0.190   cAMP-dependent protein kinase catalytic subunit alpha...
PRKACG                0.183   protein kinase, cAMP-dependent, catalytic, gamma [Ho...
RPS6KB2               0.160   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
RPS6KB1               0.156   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
RPS6KA3               0.152   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
RPS6KA1               0.152   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.152   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA2               0.149   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.149   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
PRKACB                0.148   cAMP-dependent protein kinase catalytic subunit beta...
RPS6KA6               0.147   ribosomal protein S6 kinase polypeptide 6 
PKN1                  0.144   protein kinase N1 isoform 1 
PKN1                  0.144   protein kinase N1 isoform 2 
PKN2                  0.143   protein kinase N2 
AKT3                  0.142   AKT3 kinase isoform 1 
AKT3                  0.142   AKT3 kinase isoform 2 
SGK1                  0.142   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.142   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.142   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.142   serum/glucocorticoid regulated kinase 1 isoform 2 [...
AKT2                  0.142   AKT2 kinase 
AKT1                  0.139   AKT1 kinase 
AKT1                  0.139   AKT1 kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press