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Search of human proteins with 47086439
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47086439 amelotin [Homo sapiens]
(209 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47086439 amelotin [Homo sapiens] 419 e-118
gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens] 37 0.016
gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens] 37 0.016
gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens] 37 0.016
gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens] 37 0.016
gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens] 37 0.016
gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens] 37 0.016
gi|193804858 hypothetical protein LOC100128124 [Homo sapiens] 35 0.035
gi|66529203 hypothetical protein LOC57714 [Homo sapiens] 34 0.10
gi|29826294 golgi reassembly stacking protein 2 [Homo sapiens] 33 0.13
gi|7662346 ADNP homeobox 2 [Homo sapiens] 33 0.13
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 33 0.17
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 33 0.17
gi|50428940 mediator complex subunit 25 [Homo sapiens] 33 0.23
gi|19924099 synapsin I isoform Ia [Homo sapiens] 32 0.30
gi|19924097 synapsin I isoform Ib [Homo sapiens] 32 0.30
gi|239753928 PREDICTED: hypothetical protein [Homo sapiens] 31 0.66
gi|239751558 PREDICTED: similar to hCG1790759 [Homo sapiens] 31 0.66
gi|239748470 PREDICTED: hypothetical protein [Homo sapiens] 31 0.66
gi|169212818 PREDICTED: similar to hCG1790759 [Homo sapiens] 31 0.66
gi|239742434 PREDICTED: hypothetical protein XP_002342514 [Homo ... 31 0.66
gi|10863899 numb homolog (Drosophila)-like [Homo sapiens] 31 0.66
gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens] 31 0.86
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 30 1.1
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 30 1.5
gi|83776596 CaM kinase-like vesicle-associated [Homo sapiens] 30 1.5
gi|7524354 dimethylarginine dimethylaminohydrolase 2 [Homo sapiens] 30 1.5
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 30 1.5
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 30 1.9
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 30 1.9
>gi|47086439 amelotin [Homo sapiens]
Length = 209
Score = 419 bits (1077), Expect = e-118
Identities = 209/209 (100%), Positives = 209/209 (100%)
Query: 1 MRSTILLFCLLGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQML 60
MRSTILLFCLLGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQML
Sbjct: 1 MRSTILLFCLLGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQML 60
Query: 61 TLGPDLHLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELP 120
TLGPDLHLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELP
Sbjct: 61 TLGPDLHLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELP 120
Query: 121 QIFTSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPATQGTPAGRLPTPSGTDD 180
QIFTSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPATQGTPAGRLPTPSGTDD
Sbjct: 121 QIFTSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPATQGTPAGRLPTPSGTDD 180
Query: 181 DFAVTTPAGIQRSTHAIEEATTESANGIQ 209
DFAVTTPAGIQRSTHAIEEATTESANGIQ
Sbjct: 181 DFAVTTPAGIQRSTHAIEEATTESANGIQ 209
>gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2852
Score = 36.6 bits (83), Expect = 0.016
Identities = 60/224 (26%), Positives = 79/224 (35%), Gaps = 44/224 (19%)
Query: 4 TILLFCLLGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLG 63
T L +G++ + P + T L P TLP Q S P L P M
Sbjct: 1745 TSLPLAKVGTSAPVATPGPKASVITTPLQPQATTLPAQTLS----PVLPFTPAA-MTQAH 1799
Query: 64 PDLHLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIF 123
P H+ PAAG PG L LG VLP+ A+GT +P+
Sbjct: 1800 PPTHIAPPAAGTAPG-----LLLGATLPTS----GVLPV------AEGTASMVSVVPRKS 1844
Query: 124 TSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPAT---QGTPAG-RLPTP---- 175
T+ + L LPTS G+ PA + P +G AG LP P
Sbjct: 1845 TTGKVAILSKQVSLPTSMYGSAEGGPTELTPATSHPLTPLVAEPEGAQAGTALPVPTSYA 1904
Query: 176 -------SGTDDDFAVTTP---------AGIQRSTHAIEEATTE 203
+ D V P AG + ++EATTE
Sbjct: 1905 LSRVSARTAPQDSMLVLLPQLAEAHGTSAGPHLAAEPVDEATTE 1948
>gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2924
Score = 36.6 bits (83), Expect = 0.016
Identities = 60/224 (26%), Positives = 79/224 (35%), Gaps = 44/224 (19%)
Query: 4 TILLFCLLGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLG 63
T L +G++ + P + T L P TLP Q S P L P M
Sbjct: 1817 TSLPLAKVGTSAPVATPGPKASVITTPLQPQATTLPAQTLS----PVLPFTPAA-MTQAH 1871
Query: 64 PDLHLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIF 123
P H+ PAAG PG L LG VLP+ A+GT +P+
Sbjct: 1872 PPTHIAPPAAGTAPG-----LLLGATLPTS----GVLPV------AEGTASMVSVVPRKS 1916
Query: 124 TSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPAT---QGTPAG-RLPTP---- 175
T+ + L LPTS G+ PA + P +G AG LP P
Sbjct: 1917 TTGKVAILSKQVSLPTSMYGSAEGGPTELTPATSHPLTPLVAEPEGAQAGTALPVPTSYA 1976
Query: 176 -------SGTDDDFAVTTP---------AGIQRSTHAIEEATTE 203
+ D V P AG + ++EATTE
Sbjct: 1977 LSRVSARTAPQDSMLVLLPQLAEAHGTSAGPHLAAEPVDEATTE 2020
>gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2852
Score = 36.6 bits (83), Expect = 0.016
Identities = 60/224 (26%), Positives = 79/224 (35%), Gaps = 44/224 (19%)
Query: 4 TILLFCLLGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLG 63
T L +G++ + P + T L P TLP Q S P L P M
Sbjct: 1745 TSLPLAKVGTSAPVATPGPKASVITTPLQPQATTLPAQTLS----PVLPFTPAA-MTQAH 1799
Query: 64 PDLHLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIF 123
P H+ PAAG PG L LG VLP+ A+GT +P+
Sbjct: 1800 PPTHIAPPAAGTAPG-----LLLGATLPTS----GVLPV------AEGTASMVSVVPRKS 1844
Query: 124 TSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPAT---QGTPAG-RLPTP---- 175
T+ + L LPTS G+ PA + P +G AG LP P
Sbjct: 1845 TTGKVAILSKQVSLPTSMYGSAEGGPTELTPATSHPLTPLVAEPEGAQAGTALPVPTSYA 1904
Query: 176 -------SGTDDDFAVTTP---------AGIQRSTHAIEEATTE 203
+ D V P AG + ++EATTE
Sbjct: 1905 LSRVSARTAPQDSMLVLLPQLAEAHGTSAGPHLAAEPVDEATTE 1948
>gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2924
Score = 36.6 bits (83), Expect = 0.016
Identities = 60/224 (26%), Positives = 79/224 (35%), Gaps = 44/224 (19%)
Query: 4 TILLFCLLGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLG 63
T L +G++ + P + T L P TLP Q S P L P M
Sbjct: 1817 TSLPLAKVGTSAPVATPGPKASVITTPLQPQATTLPAQTLS----PVLPFTPAA-MTQAH 1871
Query: 64 PDLHLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIF 123
P H+ PAAG PG L LG VLP+ A+GT +P+
Sbjct: 1872 PPTHIAPPAAGTAPG-----LLLGATLPTS----GVLPV------AEGTASMVSVVPRKS 1916
Query: 124 TSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPAT---QGTPAG-RLPTP---- 175
T+ + L LPTS G+ PA + P +G AG LP P
Sbjct: 1917 TTGKVAILSKQVSLPTSMYGSAEGGPTELTPATSHPLTPLVAEPEGAQAGTALPVPTSYA 1976
Query: 176 -------SGTDDDFAVTTP---------AGIQRSTHAIEEATTE 203
+ D V P AG + ++EATTE
Sbjct: 1977 LSRVSARTAPQDSMLVLLPQLAEAHGTSAGPHLAAEPVDEATTE 2020
>gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2852
Score = 36.6 bits (83), Expect = 0.016
Identities = 60/224 (26%), Positives = 79/224 (35%), Gaps = 44/224 (19%)
Query: 4 TILLFCLLGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLG 63
T L +G++ + P + T L P TLP Q S P L P M
Sbjct: 1745 TSLPLAKVGTSAPVATPGPKASVITTPLQPQATTLPAQTLS----PVLPFTPAA-MTQAH 1799
Query: 64 PDLHLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIF 123
P H+ PAAG PG L LG VLP+ A+GT +P+
Sbjct: 1800 PPTHIAPPAAGTAPG-----LLLGATLPTS----GVLPV------AEGTASMVSVVPRKS 1844
Query: 124 TSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPAT---QGTPAG-RLPTP---- 175
T+ + L LPTS G+ PA + P +G AG LP P
Sbjct: 1845 TTGKVAILSKQVSLPTSMYGSAEGGPTELTPATSHPLTPLVAEPEGAQAGTALPVPTSYA 1904
Query: 176 -------SGTDDDFAVTTP---------AGIQRSTHAIEEATTE 203
+ D V P AG + ++EATTE
Sbjct: 1905 LSRVSARTAPQDSMLVLLPQLAEAHGTSAGPHLAAEPVDEATTE 1948
>gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2924
Score = 36.6 bits (83), Expect = 0.016
Identities = 60/224 (26%), Positives = 79/224 (35%), Gaps = 44/224 (19%)
Query: 4 TILLFCLLGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLG 63
T L +G++ + P + T L P TLP Q S P L P M
Sbjct: 1817 TSLPLAKVGTSAPVATPGPKASVITTPLQPQATTLPAQTLS----PVLPFTPAA-MTQAH 1871
Query: 64 PDLHLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIF 123
P H+ PAAG PG L LG VLP+ A+GT +P+
Sbjct: 1872 PPTHIAPPAAGTAPG-----LLLGATLPTS----GVLPV------AEGTASMVSVVPRKS 1916
Query: 124 TSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPAT---QGTPAG-RLPTP---- 175
T+ + L LPTS G+ PA + P +G AG LP P
Sbjct: 1917 TTGKVAILSKQVSLPTSMYGSAEGGPTELTPATSHPLTPLVAEPEGAQAGTALPVPTSYA 1976
Query: 176 -------SGTDDDFAVTTP---------AGIQRSTHAIEEATTE 203
+ D V P AG + ++EATTE
Sbjct: 1977 LSRVSARTAPQDSMLVLLPQLAEAHGTSAGPHLAAEPVDEATTE 2020
>gi|193804858 hypothetical protein LOC100128124 [Homo sapiens]
Length = 171
Score = 35.4 bits (80), Expect = 0.035
Identities = 39/136 (28%), Positives = 48/136 (35%), Gaps = 18/136 (13%)
Query: 70 NPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIFTSLIIH 129
N A GMTP + T GG+ P V T G T+ SS+ T
Sbjct: 11 NTAGGMTPTASSSQHTAGGMT------PTVFSSQHTAGGMTPTVFSSQHTAGGMTPTASS 64
Query: 130 SLF-PGGILPT------SQAGANPDVQDGSLPAGGAGVNPATQGTP---AGRLPTPSGTD 179
S GG+ PT + G P V S P G+ P +P G PT S +
Sbjct: 65 SQHTAGGMTPTVFSSPHTAGGMTPTV--FSSPHTAGGMTPTVFSSPHTAGGMTPTASSSQ 122
Query: 180 DDFAVTTPAGIQRSTH 195
V TP TH
Sbjct: 123 HTAGVMTPTASSFPTH 138
>gi|66529203 hypothetical protein LOC57714 [Homo sapiens]
Length = 1063
Score = 33.9 bits (76), Expect = 0.10
Identities = 34/133 (25%), Positives = 48/133 (36%), Gaps = 23/133 (17%)
Query: 48 FPSLSLIPLTQMLTLGPDLHLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQL 107
+P + +P +Q GP P PGT T PL GL+ ++ P+ L
Sbjct: 127 WPQDTALPHSQAQQSGPTGQPSQP-----PGTATTPLEGDGLSAPTEVGDS--PLQAQAL 179
Query: 108 GAQGTILSSEELPQIFTSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPATQGT 167
G G SE P Q + QD S+P+GG G++ G
Sbjct: 180 GEAGVATGSEAQSS----------------PQFQDHTEGEDQDASIPSGGRGLSQEGTGP 223
Query: 168 PAGRLPTPSGTDD 180
P S T+D
Sbjct: 224 PTSAGEGHSRTED 236
>gi|29826294 golgi reassembly stacking protein 2 [Homo sapiens]
Length = 452
Score = 33.5 bits (75), Expect = 0.13
Identities = 45/182 (24%), Positives = 67/182 (36%), Gaps = 7/182 (3%)
Query: 25 GLPPTKLAPDQ--GTLPNQQQSNQVFPSLSLIPLTQMLTLGPDLHLLNPAAGMTPGTQTH 82
G+P L P Q +L + N L+PL L P+L+L PA + PG
Sbjct: 275 GVPTVPLLPPQVNQSLTSVPPMNPATTLPGLMPLPAGLPNLPNLNLNLPAPHIMPGVGLP 334
Query: 83 PLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIFTSLIIHSLFPGGILPTSQA 142
L GL + P LP + L L S L +S + PTS A
Sbjct: 335 ELVNPGLPPLPSMPPRNLP-GIAPLPLPSEFLPSFPLVPESSSAASSGELLSSLPPTSNA 393
Query: 143 GANPDVQDGSLPAGGAGVNPATQGTPAGRLPTPSGTDDDFAVTTPAGIQRSTHAIEEATT 202
++P A + T P + PT +D +TP + + A++ +
Sbjct: 394 PSDPATTTAKADAASSLTVDVT--PPTAKAPTT--VEDRVGDSTPVSEKPVSAAVDANAS 449
Query: 203 ES 204
ES
Sbjct: 450 ES 451
>gi|7662346 ADNP homeobox 2 [Homo sapiens]
Length = 1131
Score = 33.5 bits (75), Expect = 0.13
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 22/174 (12%)
Query: 12 GSTRSLPQLKPALG-----LPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLGPDL 66
G+ SL PA G L + L Q +L Q + Q +PL Q + P L
Sbjct: 314 GAPGSLTHSPPAAGQSHMTLVSSPLPVGQNSLTLQPPAPQPVFLSHGVPLHQSVN-PPVL 372
Query: 67 HLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELP--QIFT 124
L P + T L + Q + P VLP+ +G + LP T
Sbjct: 373 PLSQPVGPVNKSVGTSVLP-----INQTVRPGVLPL-TQPVGPINRPVGPGVLPVSPSVT 426
Query: 125 SLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPATQGTPAGRLPTPSGT 178
++ ++ PG +L S+A V G LPAG + PA Q TPAG +P + T
Sbjct: 427 PGVLQAVSPG-VLSVSRA-----VPSGVLPAGQ--MTPAGQMTPAGVIPGQTAT 472
Score = 33.1 bits (74), Expect = 0.17
Identities = 55/199 (27%), Positives = 76/199 (38%), Gaps = 52/199 (26%)
Query: 16 SLPQLKP--ALGLPPTKLAPDQGTL----PNQQQSNQVFPSLSLIPLTQMLTLGPDLHLL 69
+LPQ P A G P T G+L P QS+ S L LTL P
Sbjct: 295 ALPQNSPSPAAGQPVTVAQGAPGSLTHSPPAAGQSHMTLVSSPLPVGQNSLTLQP----- 349
Query: 70 NPAAGMTPGTQTHPLTLG-GLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIFTSLII 128
P Q P+ L G+ + Q ++P VLP+ +G + + LP I
Sbjct: 350 -------PAPQ--PVFLSHGVPLHQSVNPPVLPLS-QPVGPVNKSVGTSVLP-------I 392
Query: 129 HSLFPGGILPTSQA-------------GANPDVQDGSLPAGGAGVNPATQGTPAGRLP-- 173
+ G+LP +Q +P V G L A GV ++ P+G LP
Sbjct: 393 NQTVRPGVLPLTQPVGPINRPVGPGVLPVSPSVTPGVLQAVSPGVLSVSRAVPSGVLPAG 452
Query: 174 --TPSGTDDDFAVTTPAGI 190
TP+G TPAG+
Sbjct: 453 QMTPAGQ------MTPAGV 465
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 33.1 bits (74), Expect = 0.17
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 11 LGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLGPDLHLLN 70
L +T PQ P LPP P Q LP Q P+ S +P + TL P H
Sbjct: 539 LPTTTPPPQTPPLPPLPPIPALPQQPPLPPSQ------PAFSQVPASSTSTLPPSTHSKT 592
Query: 71 PAAGMTPGTQ 80
A +Q
Sbjct: 593 SAVSSQANSQ 602
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 33.1 bits (74), Expect = 0.17
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 11 LGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLGPDLHLLN 70
L +T PQ P LPP P Q LP Q P+ S +P + TL P H
Sbjct: 539 LPTTTPPPQTPPLPPLPPIPALPQQPPLPPSQ------PAFSQVPASSTSTLPPSTHSKT 592
Query: 71 PAAGMTPGTQ 80
A +Q
Sbjct: 593 SAVSSQANSQ 602
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 32.7 bits (73), Expect = 0.23
Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 27/160 (16%)
Query: 12 GSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSL-IPLTQMLTLGPDLHLLN 70
G+T S +P LPP P Q +P + QV ++ Q LGP +
Sbjct: 254 GATLSAAPQQP---LPPV---PPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPIT 307
Query: 71 PAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIFTSLIIHS 130
P PG G Q P + P G G + + P ++ +
Sbjct: 308 PLQQAAPGV--------GPPFSQAPAPQLPP------GPPG----APKPPPASQPSLVST 349
Query: 131 LFPG-GILPTSQAGANPDVQDGSLPAGGAGVNPATQGTPA 169
+ PG G+ PT+Q GA P + P G +G +PA G PA
Sbjct: 350 VAPGSGLAPTAQPGA-PSMAGTVAPGGVSGPSPAQLGAPA 388
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 32.3 bits (72), Expect = 0.30
Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 135 GILP----TSQAGANPDVQDGSLPAGGA---GVNPATQGTPAGRLPTPSGTDDDFAVTTP 187
G LP TSQ A P Q P GG G P QG P + P P G + P
Sbjct: 440 GALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPP 499
Query: 188 AG 189
AG
Sbjct: 500 AG 501
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 32.3 bits (72), Expect = 0.30
Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 135 GILP----TSQAGANPDVQDGSLPAGGA---GVNPATQGTPAGRLPTPSGTDDDFAVTTP 187
G LP TSQ A P Q P GG G P QG P + P P G + P
Sbjct: 440 GALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPP 499
Query: 188 AG 189
AG
Sbjct: 500 AG 501
>gi|239753928 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1179
Score = 31.2 bits (69), Expect = 0.66
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 101 PIFVTQLGAQGTILSSEELPQIFTSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGV 160
P+ + + ++ + +S + + + + SLF G +LPT A P +LP+ AG+
Sbjct: 405 PLGLESVPSEQSRVSEQSVVSEMQNRGLGSLFSGSLLPTDPKAALPGSSGAALPSSSAGL 464
Query: 161 NPATQGTPAG 170
P G
Sbjct: 465 RLPRASLPMG 474
>gi|239751558 PREDICTED: similar to hCG1790759 [Homo sapiens]
Length = 771
Score = 31.2 bits (69), Expect = 0.66
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 124 TSLIIHSLFPGGILPTSQAGANP-----DVQDGSLPAGGAGVNPATQGTPAGR----LPT 174
T+ I+ S F G+ + +A A+P + + G+ PAG G PA P GR L T
Sbjct: 131 TARILASSFAAGVRRSLRARASPAAPLSESRGGAAPAGFKGTAPAEARGPGGRRFSGLLT 190
Query: 175 PSGTDDD 181
PS D
Sbjct: 191 PSAARPD 197
>gi|239748470 PREDICTED: hypothetical protein [Homo sapiens]
Length = 889
Score = 31.2 bits (69), Expect = 0.66
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 101 PIFVTQLGAQGTILSSEELPQIFTSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGV 160
P+ + + ++ + +S + + + + SLF G +LPT A P +LP+ AG+
Sbjct: 405 PLGLESVPSEQSRVSEQSVVSEMQNRGLGSLFSGSLLPTDPKAALPGSSGAALPSSSAGL 464
Query: 161 NPATQGTPAG 170
P G
Sbjct: 465 RLPRASLPMG 474
>gi|169212818 PREDICTED: similar to hCG1790759 [Homo sapiens]
Length = 771
Score = 31.2 bits (69), Expect = 0.66
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 124 TSLIIHSLFPGGILPTSQAGANP-----DVQDGSLPAGGAGVNPATQGTPAGR----LPT 174
T+ I+ S F G+ + +A A+P + + G+ PAG G PA P GR L T
Sbjct: 131 TARILASSFAAGVRRSLRARASPAAPLSESRGGAAPAGFKGTAPAEARGPGGRRFSGLLT 190
Query: 175 PSGTDDD 181
PS D
Sbjct: 191 PSAARPD 197
>gi|239742434 PREDICTED: hypothetical protein XP_002342514 [Homo
sapiens]
Length = 889
Score = 31.2 bits (69), Expect = 0.66
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 101 PIFVTQLGAQGTILSSEELPQIFTSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGV 160
P+ + + ++ + +S + + + + SLF G +LPT A P +LP+ AG+
Sbjct: 405 PLGLESVPSEQSRVSEQSVVSEMQNRGLGSLFSGSLLPTDPKAALPGSSGAALPSSSAGL 464
Query: 161 NPATQGTPAG 170
P G
Sbjct: 465 RLPRASLPMG 474
>gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]
Length = 609
Score = 31.2 bits (69), Expect = 0.66
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 22 PALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLGPDLHLLNPAAGMTPGTQT 81
P LG PP P G P+Q +N + L P L LG PA PG+Q
Sbjct: 495 PGLGYPPMPRVPVVGITPSQMVANAFCSAAQLQPQPATL-LGKAGAFPPPAIPSAPGSQA 553
Query: 82 HP 83
P
Sbjct: 554 RP 555
>gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens]
Length = 511
Score = 30.8 bits (68), Expect = 0.86
Identities = 16/37 (43%), Positives = 17/37 (45%)
Query: 133 PGGILPTSQAGANPDVQDGSLPAGGAGVNPATQGTPA 169
P PT Q A P Q G +PA A A GTPA
Sbjct: 357 PPAFYPTLQPEAAPSTQLGEVPAPSAAPTTAPSGTPA 393
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 30.4 bits (67), Expect = 1.1
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 30/155 (19%)
Query: 13 STRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLGPDLHLLNPA 72
ST P+ +LGL ++ QG LP+ Q +Q S ++ P + GP HL +
Sbjct: 1038 STIKAPRKDLSLGLDDSRTNTPQGVLPSSQLKSQ--GSSNVAP----VKTGPGQHLNHSE 1091
Query: 73 AGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIFTSLIIHSLF 132
+ LN+ Q + FV L + + ++L +I
Sbjct: 1092 LAIL------------LNLLQSKTSVNMADFVQVLNIKVNSETQQQLNKI--------NL 1131
Query: 133 PGGILPTSQAGANPDV--QDGSLPAGGAGVNPATQ 165
P GIL T + +P Q+ S P G G+ P++Q
Sbjct: 1132 PAGILATGEKQTDPSTPQQESSKPLG--GIQPSSQ 1164
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 30.0 bits (66), Expect = 1.5
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 18 PQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLGPDLHLLNPAAGMTP 77
P P G PP P QG P FP PL LTL P HL P G P
Sbjct: 297 PPPVPGYGPPPGPPPPQQGPPPPPGP----FPPRPPGPLGPPLTLAPPPHLPGPPPGAPP 352
>gi|83776596 CaM kinase-like vesicle-associated [Homo sapiens]
Length = 501
Score = 30.0 bits (66), Expect = 1.5
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 144 ANPDVQDGSLPAGGAGVNPATQG--TPAGRLPTPSGTDDDFAVTTPAGIQRSTHAIEEAT 201
A P + PA V PAT G TPA TD TPA R+T A EE+T
Sbjct: 386 ATPATDGSATPATDGSVTPATDGSITPATDGSVTPATDRS---ATPATDGRATPATEEST 442
>gi|7524354 dimethylarginine dimethylaminohydrolase 2 [Homo sapiens]
Length = 285
Score = 30.0 bits (66), Expect = 1.5
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 20 LKPAL-GLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLT 57
L+P L G+PP L G LPN Q++ Q ++L+P++
Sbjct: 223 LRPGLPGVPPFLLHRGGGDLPNSQEALQKLSDVTLVPVS 261
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 30.0 bits (66), Expect = 1.5
Identities = 47/176 (26%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 12 GSTRSLPQLKPALGL--PPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLGPDLHLL 69
G P LGL PPT L Q +P Q N+ +LS+ P Q + LG L
Sbjct: 155 GPQALFPGSTDLLGLQGPPTVLT-HQALVPPQDVVNK---ALSVQPFLQPVGLGNVT--L 208
Query: 70 NPAAGM------TPGTQTHPLTLGGLNVQ------QQLHPHVLPIFVTQLGAQGTILSSE 117
P G+ +PG T TLG +Q L+ + Q+ G + S+
Sbjct: 209 QPIPGLQGLPNGSPGGAT-AATLGLAPIQVVGQPVMALNTPTSQLLAKQVPVSGYLASAA 267
Query: 118 --ELPQIFTSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPATQGTPAGR 171
P S + G ++ + + A +G+ GGAG A GTP+G+
Sbjct: 268 GPSEPVTLASAGVSPQGAGLVIQKNLSAAVATTLNGNSVFGGAGAASAPTGTPSGQ 323
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 29.6 bits (65), Expect = 1.9
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 16 SLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLGPDLHLLNPAAGM 75
++P L P +PP + P TLP + P S+ P+T + + + LNP
Sbjct: 195 AMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMS-GMPPLNP---- 249
Query: 76 TPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQL 107
P P + G L+ ++ P+F+ L
Sbjct: 250 -PPVAPLPAGMNGSGAPMNLNNNLNPMFLGPL 280
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 29.6 bits (65), Expect = 1.9
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 16 SLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLGPDLHLLNPAAGM 75
++P L P +PP + P TLP + P S+ P+T + + + LNP
Sbjct: 195 AMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMS-GMPPLNP---- 249
Query: 76 TPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQL 107
P P + G L+ ++ P+F+ L
Sbjct: 250 -PPVAPLPAGMNGSGAPMNLNNNLNPMFLGPL 280
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,613,451
Number of Sequences: 37866
Number of extensions: 540655
Number of successful extensions: 1623
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 1575
Number of HSP's gapped (non-prelim): 118
length of query: 209
length of database: 18,247,518
effective HSP length: 98
effective length of query: 111
effective length of database: 14,536,650
effective search space: 1613568150
effective search space used: 1613568150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.