Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AMTN Sequence: fasta or formatted (209aa) NCBI GI: 47086439
Description:

amelotin

Referenced in:

Bone and Related Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         16           2
 C cysteine            0.5          1           1
 D aspartate           3.3          7           3
 E glutamate           2.4          5           2
 F phenylalanine       2.9          6           1
 G glycine            10.5         22           2
 H histidine           2.9          6           1
 I isoleucine          5.3         11           2
 K lysine              1.0          2           1
 L leucine            14.8         31           2
 M methionine          1.4          3           1
 N asparagine          3.3          7           1
 P proline            11.5         24           2
 Q glutamine           9.1         19           3
 R arginine            1.9          4           1
 S serine              7.2         15           2
 T threonine          11.0         23           2
 V valine              3.3          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amelotin 
OTOG                  0.030   PREDICTED: otogelin isoform 1 
OTOG                  0.030   PREDICTED: otogelin isoform 2 
OTOG                  0.030   PREDICTED: otogelin isoform 2 
OTOG                  0.030   PREDICTED: otogelin isoform 1 
OTOG                  0.030   PREDICTED: otogelin isoform 2 
OTOG                  0.030   PREDICTED: otogelin isoform 1 
HGC6.3                0.025   hypothetical protein LOC100128124 
KIAA1618              0.023   hypothetical protein LOC57714 
GORASP2               0.020   golgi reassembly stacking protein 2 
ADNP2                 0.020   ADNP homeobox 2 
CRKRS                 0.020   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.020   Cdc2-related kinase, arginine/serine-rich isoform 1...
MED25                 0.020   mediator complex subunit 25 
SYN1                  0.018   synapsin I isoform Ia 
SYN1                  0.018   synapsin I isoform Ib 
LOC100292392          0.015   PREDICTED: hypothetical protein 
LOC647055             0.015   PREDICTED: similar to hCG1790759 
LOC100287377          0.015   PREDICTED: hypothetical protein 
LOC647055             0.015   PREDICTED: similar to hCG1790759 
LOC100287377          0.015   PREDICTED: hypothetical protein XP_002342514 
NUMBL                 0.015   numb homolog (Drosophila)-like 
ZBTB45                0.015   zinc finger and BTB domain containing 45 
CDC2L5                0.013   cell division cycle 2-like 5 isoform 1 
CPSF6                 0.013   cleavage and polyadenylation specific factor 6, 68 ...
CAMKV                 0.013   CaM kinase-like vesicle-associated 
DDAH2                 0.013   dimethylarginine dimethylaminohydrolase 2 
GLTSCR1               0.013   glioma tumor suppressor candidate region gene 1 [Ho...
RBM12                 0.013   RNA binding motif protein 12 
RBM12                 0.013   RNA binding motif protein 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press