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Search of human proteins with 4507255
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507255 signal transducer and activator of transcription 4
[Homo sapiens]
(748 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507255 signal transducer and activator of transcription 4 [H... 1500 0.0
gi|6274552 signal transducer and activator of transcription 1 is... 757 0.0
gi|21536301 signal transducer and activator of transcription 1 i... 749 0.0
gi|21618338 signal transducer and activator of transcription 3 i... 696 0.0
gi|21618340 signal transducer and activator of transcription 3 i... 696 0.0
gi|47458820 signal transducer and activator of transcription 3 i... 692 0.0
gi|4885615 signal transducer and activator of transcription 2 [H... 510 e-144
gi|21618344 signal transducer and activator of transcription 5B ... 310 3e-84
gi|21618342 signal transducer and activator of transcription 5A ... 291 2e-78
gi|23397678 signal transducer and activator of transcription 6 [... 207 2e-53
gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo sa... 44 5e-04
gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo sap... 44 5e-04
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 42 0.002
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 42 0.002
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 42 0.002
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 42 0.002
gi|212276078 leucine rich repeat (in FLII) interacting protein 1... 41 0.004
gi|126362969 Nck-associated protein 5 isoform 2 [Homo sapiens] 39 0.013
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens] 39 0.013
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 39 0.013
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 39 0.013
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 39 0.013
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 39 0.023
gi|148612801 KIAA1009 protein [Homo sapiens] 39 0.023
gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo... 36 0.11
gi|24307983 FtsJ methyltransferase domain containing 2 [Homo sap... 36 0.15
gi|187761324 shootin1 isoform a [Homo sapiens] 36 0.15
gi|50511340 shootin1 isoform b [Homo sapiens] 36 0.15
gi|38570058 hypothetical protein LOC80129 [Homo sapiens] 35 0.19
gi|7705415 hook homolog 1 [Homo sapiens] 35 0.19
>gi|4507255 signal transducer and activator of transcription 4 [Homo
sapiens]
Length = 748
Score = 1500 bits (3883), Expect = 0.0
Identities = 748/748 (100%), Positives = 748/748 (100%)
Query: 1 MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNL 60
MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNL
Sbjct: 1 MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNL 60
Query: 61 LIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILAAAN 120
LIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILAAAN
Sbjct: 61 LIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILAAAN 120
Query: 121 MPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQT 180
MPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQT
Sbjct: 121 MPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQT 180
Query: 181 MDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNTMLIEELQDWKR 240
MDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNTMLIEELQDWKR
Sbjct: 181 MDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNTMLIEELQDWKR 240
Query: 241 RQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPMQRTHM 300
RQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPMQRTHM
Sbjct: 241 RQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPMQRTHM 300
Query: 301 LERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQFTVKLRLLIKLPELNYQVKVK 360
LERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQFTVKLRLLIKLPELNYQVKVK
Sbjct: 301 LERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQFTVKLRLLIKLPELNYQVKVK 360
Query: 361 ASIDKNVSTLSNRRFVLCGTNVKAMSIEESSNGSLSVEFRHLQPKEMKSSAGGKGNEGCH 420
ASIDKNVSTLSNRRFVLCGTNVKAMSIEESSNGSLSVEFRHLQPKEMKSSAGGKGNEGCH
Sbjct: 361 ASIDKNVSTLSNRRFVLCGTNVKAMSIEESSNGSLSVEFRHLQPKEMKSSAGGKGNEGCH 420
Query: 421 MVTEELHSITFETQICLYGLTIDLETSSLPVVMISNVSQLPNAWASIIWYNVSTNDSQNL 480
MVTEELHSITFETQICLYGLTIDLETSSLPVVMISNVSQLPNAWASIIWYNVSTNDSQNL
Sbjct: 421 MVTEELHSITFETQICLYGLTIDLETSSLPVVMISNVSQLPNAWASIIWYNVSTNDSQNL 480
Query: 481 VFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAEKLTVQSSYSDGHLTWAKFCK 540
VFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAEKLTVQSSYSDGHLTWAKFCK
Sbjct: 481 VFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAEKLTVQSSYSDGHLTWAKFCK 540
Query: 541 EHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMGFVSKEKERLLLKDKMPGTFLLRFS 600
EHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMGFVSKEKERLLLKDKMPGTFLLRFS
Sbjct: 541 EHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMGFVSKEKERLLLKDKMPGTFLLRFS 600
Query: 601 ESHLGGITFTWVDHSESGEVRFHSVEPYNKGRLSALPFADILRDYKVIMAENIPENPLKY 660
ESHLGGITFTWVDHSESGEVRFHSVEPYNKGRLSALPFADILRDYKVIMAENIPENPLKY
Sbjct: 601 ESHLGGITFTWVDHSESGEVRFHSVEPYNKGRLSALPFADILRDYKVIMAENIPENPLKY 660
Query: 661 LYPDIPKDKAFGKHYSSQPCEVSRPTERGDKGYVPSVFIPISTIRSDSTEPHSPSDLLPM 720
LYPDIPKDKAFGKHYSSQPCEVSRPTERGDKGYVPSVFIPISTIRSDSTEPHSPSDLLPM
Sbjct: 661 LYPDIPKDKAFGKHYSSQPCEVSRPTERGDKGYVPSVFIPISTIRSDSTEPHSPSDLLPM 720
Query: 721 SPSVYAVLRENLSPTTIETAMKSPYSAE 748
SPSVYAVLRENLSPTTIETAMKSPYSAE
Sbjct: 721 SPSVYAVLRENLSPTTIETAMKSPYSAE 748
>gi|6274552 signal transducer and activator of transcription 1
isoform alpha [Homo sapiens]
Length = 750
Score = 757 bits (1954), Expect = 0.0
Identities = 398/736 (54%), Positives = 527/736 (71%), Gaps = 16/736 (2%)
Query: 1 MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNL 60
MSQW ++QQL+ KFLEQV Q YDD+FPMEIR LAQW+E QDWE A+N+ + ATI +L
Sbjct: 1 MSQWYELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAANDVSFATIRFHDL 60
Query: 61 LIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILAAAN 120
L QLD+Q R S E N LL HN+++ ++ LQ F +P+ ++++I +CL+EER+IL A
Sbjct: 61 LSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPIQMSMIIYSCLKEERKILENAQ 120
Query: 121 MPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQT 180
Q ++QS+ + ++Q+ ++ KV +K+ V E + K LEDLQDE+D++ KT+Q
Sbjct: 121 RFNQAQ-SGNIQSTVMLDKQKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQN 179
Query: 181 MDQSDKNSAMVNQ--EVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNTMLIEELQDW 238
+ A +Q E L L++M LD KRKE + K+ ++++ T+L N ++ +EL +W
Sbjct: 180 REHETNGVAKSDQKQEQLLLKKMYLMLDNKRKEVVHKIIELLNVTELTQNALINDELVEW 239
Query: 239 KRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPMQRT 298
KRRQQ ACIGGP + LDQLQN FT++AESL Q+R+QL+KLEE K TYE DPI +
Sbjct: 240 KRRQQSACIGGPPNACLDQLQNWFTIVAESLQQVRQQLKKLEELEQKYTYEHDPITKNKQ 299
Query: 299 HMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQFTVKLRLLIKLPELNYQVK 358
+ +R L L ++SFVVERQPCMPTHPQRPLVLKT +QFTVKLRLL+KL ELNY +K
Sbjct: 300 VLWDRTFSLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLK 359
Query: 359 VKASIDKNVSTLSN----RRFVLCGTNVKAMSIEESSNGSLSVEFRHLQPKEMKSSAGGK 414
VK DK+V+ + R+F + GT+ K M++EES+NGSL+ EFRHLQ KE K+ AG +
Sbjct: 360 VKVLFDKDVNERNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKN-AGTR 418
Query: 415 GNEGCHMVTEELHSITFETQICLYGLTIDLETSSLPVVMISNVSQLPNAWASIIWYNVST 474
NEG +VTEELHS++FETQ+C GL IDLET+SLPVV+ISNVSQLP+ WASI+WYN+
Sbjct: 419 TNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLV 478
Query: 475 NDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAEKLTVQSSYSDGHLT 534
+ +NL FF PP A +QL EV+SWQFSS RGLN DQL+ML EKL ++ DG +
Sbjct: 479 AEPRNLSFFLTPPCARWAQLSEVLSWQFSSVTKRGLNVDQLNMLGEKLLGPNASPDGLIP 538
Query: 535 WAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMGFVSKEKERLLLKDKMPGT 594
W +FCKE++ K+F FW W+E+IL+LIKKH+LPLW DG +MGF+SKE+ER LLKD+ PGT
Sbjct: 539 WTRFCKENINDKNFPFWLWIESILELIKKHLLPLWNDGCIMGFISKERERALLKDQQPGT 598
Query: 595 FLLRFSE-SHLGGITFTWVDHSES-GEVRFHSVEPYNKGRLSALPFADILRDYKVIMAEN 652
FLLRFSE S G ITFTWV+ S++ GE FH+VEPY K LSA+ F DI+R+YKV+ AEN
Sbjct: 599 FLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAEN 658
Query: 653 IPENPLKYLYPDIPKDKAFGKHYSSQPCEVSRPTE-RGDK--GYVPSVFIPISTIRSDST 709
IPENPLKYLYP+I KD AFGK+Y S+P E P E G K GY+ + I +S +
Sbjct: 659 IPENPLKYLYPNIDKDHAFGKYY-SRPKEAPEPMELDGPKGTGYIKTELISVSEVHPSRL 717
Query: 710 EPHSPSDLLPMSPSVY 725
+ + +LLPMSP +
Sbjct: 718 Q--TTDNLLPMSPEEF 731
>gi|21536301 signal transducer and activator of transcription 1
isoform beta [Homo sapiens]
Length = 712
Score = 749 bits (1935), Expect = 0.0
Identities = 392/715 (54%), Positives = 517/715 (72%), Gaps = 14/715 (1%)
Query: 1 MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNL 60
MSQW ++QQL+ KFLEQV Q YDD+FPMEIR LAQW+E QDWE A+N+ + ATI +L
Sbjct: 1 MSQWYELQQLDSKFLEQVHQLYDDSFPMEIRQYLAQWLEKQDWEHAANDVSFATIRFHDL 60
Query: 61 LIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILAAAN 120
L QLD+Q R S E N LL HN+++ ++ LQ F +P+ ++++I +CL+EER+IL A
Sbjct: 61 LSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPIQMSMIIYSCLKEERKILENAQ 120
Query: 121 MPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQT 180
Q ++QS+ + ++Q+ ++ KV +K+ V E + K LEDLQDE+D++ KT+Q
Sbjct: 121 RFNQAQ-SGNIQSTVMLDKQKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQN 179
Query: 181 MDQSDKNSAMVNQ--EVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNTMLIEELQDW 238
+ A +Q E L L++M LD KRKE + K+ ++++ T+L N ++ +EL +W
Sbjct: 180 REHETNGVAKSDQKQEQLLLKKMYLMLDNKRKEVVHKIIELLNVTELTQNALINDELVEW 239
Query: 239 KRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPMQRT 298
KRRQQ ACIGGP + LDQLQN FT++AESL Q+R+QL+KLEE K TYE DPI +
Sbjct: 240 KRRQQSACIGGPPNACLDQLQNWFTIVAESLQQVRQQLKKLEELEQKYTYEHDPITKNKQ 299
Query: 299 HMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQFTVKLRLLIKLPELNYQVK 358
+ +R L L ++SFVVERQPCMPTHPQRPLVLKT +QFTVKLRLL+KL ELNY +K
Sbjct: 300 VLWDRTFSLFQQLIQSSFVVERQPCMPTHPQRPLVLKTGVQFTVKLRLLVKLQELNYNLK 359
Query: 359 VKASIDKNVSTLSN----RRFVLCGTNVKAMSIEESSNGSLSVEFRHLQPKEMKSSAGGK 414
VK DK+V+ + R+F + GT+ K M++EES+NGSL+ EFRHLQ KE K+ AG +
Sbjct: 360 VKVLFDKDVNERNTVKGFRKFNILGTHTKVMNMEESTNGSLAAEFRHLQLKEQKN-AGTR 418
Query: 415 GNEGCHMVTEELHSITFETQICLYGLTIDLETSSLPVVMISNVSQLPNAWASIIWYNVST 474
NEG +VTEELHS++FETQ+C GL IDLET+SLPVV+ISNVSQLP+ WASI+WYN+
Sbjct: 419 TNEGPLIVTEELHSLSFETQLCQPGLVIDLETTSLPVVVISNVSQLPSGWASILWYNMLV 478
Query: 475 NDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAEKLTVQSSYSDGHLT 534
+ +NL FF PP A +QL EV+SWQFSS RGLN DQL+ML EKL ++ DG +
Sbjct: 479 AEPRNLSFFLTPPCARWAQLSEVLSWQFSSVTKRGLNVDQLNMLGEKLLGPNASPDGLIP 538
Query: 535 WAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMGFVSKEKERLLLKDKMPGT 594
W +FCKE++ K+F FW W+E+IL+LIKKH+LPLW DG +MGF+SKE+ER LLKD+ PGT
Sbjct: 539 WTRFCKENINDKNFPFWLWIESILELIKKHLLPLWNDGCIMGFISKERERALLKDQQPGT 598
Query: 595 FLLRFSE-SHLGGITFTWVDHSES-GEVRFHSVEPYNKGRLSALPFADILRDYKVIMAEN 652
FLLRFSE S G ITFTWV+ S++ GE FH+VEPY K LSA+ F DI+R+YKV+ AEN
Sbjct: 599 FLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSAVTFPDIIRNYKVMAAEN 658
Query: 653 IPENPLKYLYPDIPKDKAFGKHYSSQPCEVSRPTE-RGDK--GYVPSVFIPISTI 704
IPENPLKYLYP+I KD AFGK+Y S+P E P E G K GY+ + I +S +
Sbjct: 659 IPENPLKYLYPNIDKDHAFGKYY-SRPKEAPEPMELDGPKGTGYIKTELISVSEV 712
>gi|21618338 signal transducer and activator of transcription 3
isoform 2 [Homo sapiens]
Length = 769
Score = 696 bits (1795), Expect = 0.0
Identities = 357/734 (48%), Positives = 502/734 (68%), Gaps = 19/734 (2%)
Query: 1 MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNL 60
M+QWNQ+QQL+ ++LEQ+ Q Y D+FPME+R LA WIE+QDW A++ E+ AT++ NL
Sbjct: 1 MAQWNQLQQLDTRYLEQLHQLYSDSFPMELRQFLAPWIESQDWAYAASKESHATLVFHNL 60
Query: 61 LIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRIL-AAA 119
L ++D+Q R +E N+L HNL+RI++ LQ ++ PM +A +++ CL EE R+L AA
Sbjct: 61 LGEIDQQYSRFLQESNVLYQHNLRRIKQFLQSRYLEKPMEIARIVARCLWEESRLLQTAA 120
Query: 120 NMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQ 179
QG ++ V+E+Q+ +E + ++ VQ EQ K +E+LQD+FD+ YKT++
Sbjct: 121 TAAQQGGQANHPTAAVVTEKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLK 180
Query: 180 TM----DQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNTMLIEEL 235
+ D + N ++ Q++ L++ML +LD R+ +S++ ++ + + T+ EEL
Sbjct: 181 SQGDMQDLNGNNQSVTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEEL 240
Query: 236 QDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPM 295
DWKRRQQIACIGGP + LD+L+N T LAES Q R+Q++KLEE K++Y+GDPI
Sbjct: 241 ADWKRRQQIACIGGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQ 300
Query: 296 QRTHMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQFTVKLRLLIKLPELNY 355
R + ER+ L NL K++FVVERQPCMP HP RPLV+KT +QFT K+RLL+K PELNY
Sbjct: 301 HRPMLEERIVELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLLVKFPELNY 360
Query: 356 QVKVKASIDKNVSTLS----NRRFVLCGTNVKAMSIEESSNGSLSVEFRHLQPKEMKSSA 411
Q+K+K IDK+ ++ +R+F + GTN K M++EES+NGSLS EF+HL +E +
Sbjct: 361 QLKIKVCIDKDSGDVAALRGSRKFNILGTNTKVMNMEESNNGSLSAEFKHLTLREQRCGN 420
Query: 412 GGKGN-EGCHMVTEELHSITFETQICLYGLTIDLETSSLPVVMISNVSQLPNAWASIIWY 470
GG+ N + +VTEELH ITFET++ GL IDLET SLPVV+ISN+ Q+PNAWASI+WY
Sbjct: 421 GGRANCDASLIVTEELHLITFETEVYHQGLKIDLETHSLPVVVISNICQMPNAWASILWY 480
Query: 471 NVSTNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAEKLTVQS-SYS 529
N+ TN+ +N+ FF PP T Q+ EV+SWQFSS RGL+ +QL LAEKL +YS
Sbjct: 481 NMLTNNPKNVNFFTKPPIGTWDQVAEVLSWQFSSTTKRGLSIEQLTTLAEKLLGPGVNYS 540
Query: 530 DGHLTWAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMGFVSKEKERLLLKD 589
+TWAKFCKE++ GK F+FW WL+ I+DL+KK+IL LW +GY+MGF+SKE+ER +L
Sbjct: 541 GCQITWAKFCKENMAGKGFSFWVWLDNIIDLVKKYILALWNEGYIMGFISKERERAILST 600
Query: 590 KMPGTFLLRFSESHL-GGITFTWVDHSESGEVRFHSVEPYNKGRLSALPFADILRDYKVI 648
K PGTFLLRFSES GG+TFTWV+ SG+ + SVEPY K +L+ + FA+I+ YK++
Sbjct: 601 KPPGTFLLRFSESSKEGGVTFTWVEKDISGKTQIQSVEPYTKQQLNNMSFAEIIMGYKIM 660
Query: 649 MAENIPENPLKYLYPDIPKDKAFGKHYSSQPCEVSRPTERGDKGYVPSVFIPISTIRSDS 708
A NI +PL YLYPDIPK++AFGK Y + + G Y+ + FI ++ +
Sbjct: 661 DATNILVSPLVYLYPDIPKEEAFGK-YCRPESQEHPEADPGAAPYLKTKFICVTPTTCSN 719
Query: 709 TEPHSPSDLLPMSP 722
T LPMSP
Sbjct: 720 TID------LPMSP 727
>gi|21618340 signal transducer and activator of transcription 3
isoform 1 [Homo sapiens]
Length = 770
Score = 696 bits (1795), Expect = 0.0
Identities = 356/734 (48%), Positives = 501/734 (68%), Gaps = 18/734 (2%)
Query: 1 MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNL 60
M+QWNQ+QQL+ ++LEQ+ Q Y D+FPME+R LA WIE+QDW A++ E+ AT++ NL
Sbjct: 1 MAQWNQLQQLDTRYLEQLHQLYSDSFPMELRQFLAPWIESQDWAYAASKESHATLVFHNL 60
Query: 61 LIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRIL-AAA 119
L ++D+Q R +E N+L HNL+RI++ LQ ++ PM +A +++ CL EE R+L AA
Sbjct: 61 LGEIDQQYSRFLQESNVLYQHNLRRIKQFLQSRYLEKPMEIARIVARCLWEESRLLQTAA 120
Query: 120 NMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQ 179
QG ++ V+E+Q+ +E + ++ VQ EQ K +E+LQD+FD+ YKT++
Sbjct: 121 TAAQQGGQANHPTAAVVTEKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLK 180
Query: 180 TM----DQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNTMLIEEL 235
+ D + N ++ Q++ L++ML +LD R+ +S++ ++ + + T+ EEL
Sbjct: 181 SQGDMQDLNGNNQSVTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEEL 240
Query: 236 QDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPM 295
DWKRRQQIACIGGP + LD+L+N T LAES Q R+Q++KLEE K++Y+GDPI
Sbjct: 241 ADWKRRQQIACIGGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQ 300
Query: 296 QRTHMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQFTVKLRLLIKLPELNY 355
R + ER+ L NL K++FVVERQPCMP HP RPLV+KT +QFT K+RLL+K PELNY
Sbjct: 301 HRPMLEERIVELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLLVKFPELNY 360
Query: 356 QVKVKASIDKNVSTLS----NRRFVLCGTNVKAMSIEESSNGSLSVEFRHLQPKEMKSSA 411
Q+K+K IDK+ ++ +R+F + GTN K M++EES+NGSLS EF+HL +E +
Sbjct: 361 QLKIKVCIDKDSGDVAALRGSRKFNILGTNTKVMNMEESNNGSLSAEFKHLTLREQRCGN 420
Query: 412 GGKGN-EGCHMVTEELHSITFETQICLYGLTIDLETSSLPVVMISNVSQLPNAWASIIWY 470
GG+ N + +VTEELH ITFET++ GL IDLET SLPVV+ISN+ Q+PNAWASI+WY
Sbjct: 421 GGRANCDASLIVTEELHLITFETEVYHQGLKIDLETHSLPVVVISNICQMPNAWASILWY 480
Query: 471 NVSTNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAEKLTVQS-SYS 529
N+ TN+ +N+ FF PP T Q+ EV+SWQFSS RGL+ +QL LAEKL +YS
Sbjct: 481 NMLTNNPKNVNFFTKPPIGTWDQVAEVLSWQFSSTTKRGLSIEQLTTLAEKLLGPGVNYS 540
Query: 530 DGHLTWAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMGFVSKEKERLLLKD 589
+TWAKFCKE++ GK F+FW WL+ I+DL+KK+IL LW +GY+MGF+SKE+ER +L
Sbjct: 541 GCQITWAKFCKENMAGKGFSFWVWLDNIIDLVKKYILALWNEGYIMGFISKERERAILST 600
Query: 590 KMPGTFLLRFSESHL-GGITFTWVDHSESGEVRFHSVEPYNKGRLSALPFADILRDYKVI 648
K PGTFLLRFSES GG+TFTWV+ SG+ + SVEPY K +L+ + FA+I+ YK++
Sbjct: 601 KPPGTFLLRFSESSKEGGVTFTWVEKDISGKTQIQSVEPYTKQQLNNMSFAEIIMGYKIM 660
Query: 649 MAENIPENPLKYLYPDIPKDKAFGKHYSSQPCEVSRPTERGDKGYVPSVFIPISTIRSDS 708
A NI +PL YLYPDIPK++AFGK+ + E Y+ + FI ++ +
Sbjct: 661 DATNILVSPLVYLYPDIPKEEAFGKYCRPESQEHPEADPGSAAPYLKTKFICVTPTTCSN 720
Query: 709 TEPHSPSDLLPMSP 722
T LPMSP
Sbjct: 721 TID------LPMSP 728
>gi|47458820 signal transducer and activator of transcription 3
isoform 3 [Homo sapiens]
Length = 722
Score = 692 bits (1787), Expect = 0.0
Identities = 350/714 (49%), Positives = 494/714 (69%), Gaps = 12/714 (1%)
Query: 1 MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNL 60
M+QWNQ+QQL+ ++LEQ+ Q Y D+FPME+R LA WIE+QDW A++ E+ AT++ NL
Sbjct: 1 MAQWNQLQQLDTRYLEQLHQLYSDSFPMELRQFLAPWIESQDWAYAASKESHATLVFHNL 60
Query: 61 LIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRIL-AAA 119
L ++D+Q R +E N+L HNL+RI++ LQ ++ PM +A +++ CL EE R+L AA
Sbjct: 61 LGEIDQQYSRFLQESNVLYQHNLRRIKQFLQSRYLEKPMEIARIVARCLWEESRLLQTAA 120
Query: 120 NMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQ 179
QG ++ V+E+Q+ +E + ++ VQ EQ K +E+LQD+FD+ YKT++
Sbjct: 121 TAAQQGGQANHPTAAVVTEKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLK 180
Query: 180 TM----DQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNTMLIEEL 235
+ D + N ++ Q++ L++ML +LD R+ +S++ ++ + + T+ EEL
Sbjct: 181 SQGDMQDLNGNNQSVTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEEL 240
Query: 236 QDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPM 295
DWKRRQQIACIGGP + LD+L+N T LAES Q R+Q++KLEE K++Y+GDPI
Sbjct: 241 ADWKRRQQIACIGGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQ 300
Query: 296 QRTHMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQFTVKLRLLIKLPELNY 355
R + ER+ L NL K++FVVERQPCMP HP RPLV+KT +QFT K+RLL+K PELNY
Sbjct: 301 HRPMLEERIVELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLLVKFPELNY 360
Query: 356 QVKVKASIDKNVSTLS----NRRFVLCGTNVKAMSIEESSNGSLSVEFRHLQPKEMKSSA 411
Q+K+K IDK+ ++ +R+F + GTN K M++EES+NGSLS EF+HL +E +
Sbjct: 361 QLKIKVCIDKDSGDVAALRGSRKFNILGTNTKVMNMEESNNGSLSAEFKHLTLREQRCGN 420
Query: 412 GGKGN-EGCHMVTEELHSITFETQICLYGLTIDLETSSLPVVMISNVSQLPNAWASIIWY 470
GG+ N + +VTEELH ITFET++ GL IDLET SLPVV+ISN+ Q+PNAWASI+WY
Sbjct: 421 GGRANCDASLIVTEELHLITFETEVYHQGLKIDLETHSLPVVVISNICQMPNAWASILWY 480
Query: 471 NVSTNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAEKLTVQS-SYS 529
N+ TN+ +N+ FF PP T Q+ EV+SWQFSS RGL+ +QL LAEKL +YS
Sbjct: 481 NMLTNNPKNVNFFTKPPIGTWDQVAEVLSWQFSSTTKRGLSIEQLTTLAEKLLGPGVNYS 540
Query: 530 DGHLTWAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMGFVSKEKERLLLKD 589
+TWAKFCKE++ GK F+FW WL+ I+DL+KK+IL LW +GY+MGF+SKE+ER +L
Sbjct: 541 GCQITWAKFCKENMAGKGFSFWVWLDNIIDLVKKYILALWNEGYIMGFISKERERAILST 600
Query: 590 KMPGTFLLRFSESHL-GGITFTWVDHSESGEVRFHSVEPYNKGRLSALPFADILRDYKVI 648
K PGTFLLRFSES GG+TFTWV+ SG+ + SVEPY K +L+ + FA+I+ YK++
Sbjct: 601 KPPGTFLLRFSESSKEGGVTFTWVEKDISGKTQIQSVEPYTKQQLNNMSFAEIIMGYKIM 660
Query: 649 MAENIPENPLKYLYPDIPKDKAFGKHYSSQPCEVSRPTERGDKGYVPSVFIPIS 702
A NI +PL YLYPDIPK++AFGK+ + E Y+ + FI ++
Sbjct: 661 DATNILVSPLVYLYPDIPKEEAFGKYCRPESQEHPEADPGSAAPYLKTKFICVT 714
>gi|4885615 signal transducer and activator of transcription 2 [Homo
sapiens]
Length = 851
Score = 510 bits (1313), Expect = e-144
Identities = 290/685 (42%), Positives = 427/685 (62%), Gaps = 11/685 (1%)
Query: 1 MSQWNQVQQLEIKFLEQVDQFYDDNF-PMEIRHLLAQWIENQDWEAAS--NNETMATILL 57
M+QW +Q L+ F +Q+ Q Y + P++IR LA WIE+Q+W+ A+ ++++ AT+L
Sbjct: 1 MAQWEMLQNLDSPFQDQLHQLYSHSLLPVDIRQYLAVWIEDQNWQEAALGSDDSKATMLF 60
Query: 58 QNLLIQLDEQLGRVSKE-KNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRIL 116
+ L QL+ + GR S++ ++LLL HNL++ + +Q F +P +A +I N L EE+RIL
Sbjct: 61 FHFLDQLNYECGRCSQDPESLLLQHNLRKFCRDIQ-PFSQDPTQLAEMIFNLLLEEKRIL 119
Query: 117 AAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYK 176
A E L++ V +Q +E ++ ++ ++ + L+D QD F +RYK
Sbjct: 120 IQAQRAQLEQGEPVLETP-VESQQHEIESRILDLRAMMEKLVKSISQLKDQQDVFCFRYK 178
Query: 177 TIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNTMLIEELQ 236
IQ ++ +E LQE LN LD +RKE L ++ L+ +L+ +L+
Sbjct: 179 -IQAKGKTPSLDPHQTKEQKILQETLNELDKRRKEVLDASKALLGRLTTLIE-LLLPKLE 236
Query: 237 DWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPMQ 296
+WK +QQ ACI P+ +GL+QL+ FT A+ LF LR+ L++L+ S ++Y+ DP+
Sbjct: 237 EWKAQQQKACIRAPIDHGLEQLETWFTAGAKLLFHLRQLLKELKGLSCLVSYQDDPLTKG 296
Query: 297 RTHMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQFTVKLRLLIKLPELNYQ 356
+VT L+ L +FVVE QPCMP P RPL+LKT +FTV+ RLL++L E N
Sbjct: 297 VDLRNAQVTELLQRLLHRAFVVETQPCMPQTPHRPLILKTGSKFTVRTRLLVRLQEGNES 356
Query: 357 VKVKASIDKNVSTLSN-RRFVLCGTNVKAMSIEESSNGSLSVEFRHLQPKEMKSSAGGKG 415
+ V+ SID+N L R+F + +N K ++ E+ + L +F +L E +S GKG
Sbjct: 357 LTVEVSIDRNPPQLQGFRKFNILTSNQKTLTPEKGQSQGLIWDFGYLTLVEQRSGGSGKG 416
Query: 416 -NEGCHMVTEELHSITFETQICLYGLTIDLETSSLPVVMISNVSQLPNAWASIIWYNVST 474
N+G VTEELH I+F + GL +L+T +LPVV+ISN++QL AWAS++W+N+ +
Sbjct: 417 SNKGPLGVTEELHIISFTVKYTYQGLKQELKTDTLPVVIISNMNQLSIAWASVLWFNLLS 476
Query: 475 NDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAEKLTVQSSYS-DGHL 533
+ QN FF+NPP A S L +SWQFSSYVGRGLNSDQL ML KL Q+ + D L
Sbjct: 477 PNLQNQQFFSNPPKAPWSLLGPALSWQFSSYVGRGLNSDQLSMLRNKLFGQNCRTEDPLL 536
Query: 534 TWAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMGFVSKEKERLLLKDKMPG 593
+WA F K P FWTWL+ IL+L+ H+ LW DG +MGFVS+ +ER LLK M G
Sbjct: 537 SWADFTKRESPPGKLPFWTWLDKILELVHDHLKDLWNDGRIMGFVSRSQERRLLKKTMSG 596
Query: 594 TFLLRFSESHLGGITFTWVDHSESGEVRFHSVEPYNKGRLSALPFADILRDYKVIMAENI 653
TFLLRFSES GGIT +WV+H + +V +SV+PY K L +LP +I+R Y+++ ENI
Sbjct: 597 TFLLRFSESSEGGITCSWVEHQDDDKVLIYSVQPYTKEVLQSLPLTEIIRHYQLLTEENI 656
Query: 654 PENPLKYLYPDIPKDKAFGKHYSSQ 678
PENPL++LYP IP+D+AFG +Y +
Sbjct: 657 PENPLRFLYPRIPRDEAFGCYYQEK 681
>gi|21618344 signal transducer and activator of transcription 5B
[Homo sapiens]
Length = 787
Score = 310 bits (794), Expect = 3e-84
Identities = 229/732 (31%), Positives = 362/732 (49%), Gaps = 70/732 (9%)
Query: 1 MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAAS----NNETMATIL 56
M+ W Q QQL+ + L Q+ Y +FP+E+RH L+QWIE+Q W++ AT L
Sbjct: 1 MAVWIQAQQLQGEALHQMQALYGQHFPIEVRHYLSQWIESQAWDSVDLDNPQENIKATQL 60
Query: 57 LQNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRIL 116
L+ L+ +L ++ E LL L LQ + PM + I + L E+R++
Sbjct: 61 LEGLVQELQKKAEHQVGEDGFLLKIKLGHYATQLQNTYDRCPMELVRCIRHILYNEQRLV 120
Query: 117 AAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYK 176
AN G + ++S++ + ++ Q TE + K L+ Q+ F +Y+
Sbjct: 121 REAN---NGSSPAGSLADAMSQKHLQINQTFEELRLVTQDTENELKKLQQTQEYFIIQYQ 177
Query: 177 T-------------IQTMDQSDKNSAMVNQEVLT---LQEMLNSLDFKRKEALSKMTQII 220
+ ++ + +A+ ++V LQ +L R E K + +
Sbjct: 178 ESLRIQAQFGPLAQLSPQERLSRETALQQKQVSLEAWLQREAQTLQQYRVELAEKHQKTL 237
Query: 221 HETDLLMNTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLE 280
+L +EL WKRRQQ+A GGP LD LQ+ LAE ++Q R+Q+ + E
Sbjct: 238 QLLRKQQTIILDDELIQWKRRQQLAGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAE 297
Query: 281 EQSTKMTYEGDPIPMQRTHMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQF 340
++ G P+ + +T +I L ++F++E+QP P VLKT +F
Sbjct: 298 HLCQQLPIPG-PVEEMLAEVNATITDIISALVTSTFIIEKQP--------PQVLKTQTKF 348
Query: 341 TVKLRLLI--KLPELNYQVKVKASI-----DKNVSTLSNRRFVLCGTNVKAMSIEE--SS 391
+RLL+ KL +VKA+I K++ N R G + + E +
Sbjct: 349 AATVRLLVGGKLNVHMNPPQVKATIISEQQAKSLLKNENTRNDYSGEILNNCCVMEYHQA 408
Query: 392 NGSLSVEFRHLQPKEMKSSAGGKGNEGCHMVTEELHSITFETQICLYG--LTIDLETSSL 449
G+LS FR++ K +K S G VTEE +I FE+Q + G L ++T SL
Sbjct: 409 TGTLSAHFRNMSLKRIKRS----DRRGAESVTEEKFTILFESQFSVGGNELVFQVKTLSL 464
Query: 450 PVVMISNVSQLPNAWASIIWYNVSTNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYV--G 507
PVV+I + SQ NA A+++W N + V F P QL E ++ +F + V
Sbjct: 465 PVVVIVHGSQDNNATATVLWDNAFAEPGR--VPFAVPDKVLWPQLCEALNMKFKAEVQSN 522
Query: 508 RGLNSDQLHMLAEKLTVQSS-----YSDGHLTWAKFCKEHLPGKSFTFWTWLEAILDLIK 562
RGL + L LA+KL SS YS ++W++F +E+LPG+++TFW W + +++++K
Sbjct: 523 RGLTKENLVFLAQKLFNNSSSHLEDYSGLSVSWSQFNRENLPGRNYTFWQWFDGVMEVLK 582
Query: 563 KHILPLWIDGYVMGFVSKEKERLLLKDKMPGTFLLRFSESHLGGITFTWVDHSESGEVRF 622
KH+ P W DG ++GFV+K++ LL +K GTFLLRFS+S +GGIT W +S E F
Sbjct: 583 KHLKPHWNDGAILGFVNKQQAHDLLINKPDGTFLLRFSDSEIGGITIAW--KFDSQERMF 640
Query: 623 HSVEPYNKGRLSALPFADILRDYKVIMAENIPENPLKYLYPDIPKDKAFGKHYSSQPCEV 682
++ P+ S AD L D N L Y++PD PKD+ + K+Y+ PCE
Sbjct: 641 WNLMPFTTRDFSIRSLADRLGDL----------NYLIYVFPDRPKDEVYSKYYTPVPCES 690
Query: 683 SRPTERGDKGYV 694
+ T + GYV
Sbjct: 691 A--TAKAVDGYV 700
>gi|21618342 signal transducer and activator of transcription 5A
[Homo sapiens]
Length = 794
Score = 291 bits (744), Expect = 2e-78
Identities = 218/714 (30%), Positives = 350/714 (49%), Gaps = 68/714 (9%)
Query: 1 MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAAS----NNETMATIL 56
M+ W Q QQL+ L Q+ Y +FP+E+RH LAQWIE+Q W+A + AT L
Sbjct: 1 MAGWIQAQQLQGDALRQMQVLYGQHFPIEVRHYLAQWIESQPWDAIDLDNPQDRAQATQL 60
Query: 57 LQNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRIL 116
L+ L+ +L ++ E LL L LQ + P+ + I + L E+R++
Sbjct: 61 LEGLVQELQKKAEHQVGEDGFLLKIKLGHYATQLQKTYDRCPLELVRCIRHILYNEQRLV 120
Query: 117 AAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYK 176
AN P + ++S++ + ++ Q TE + K L+ Q+ F +Y+
Sbjct: 121 REANN-CSSPA--GILVDAMSQKHLQINQTFEELRLVTQDTENELKKLQQTQEYFIIQYQ 177
Query: 177 T-------------IQTMDQSDKNSAMVNQEVLT---LQEMLNSLDFKRKEALSKMTQII 220
+ ++ + +A+ ++V LQ +L R E K + +
Sbjct: 178 ESLRIQAQFAQLAQLSPQERLSRETALQQKQVSLEAWLQREAQTLQQYRVELAEKHQKTL 237
Query: 221 HETDLLMNTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLE 280
+L +EL WKRRQQ+A GGP LD LQ+ LAE ++Q R+Q+ + E
Sbjct: 238 QLLRKQQTIILDDELIQWKRRQQLAGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAE 297
Query: 281 EQSTKMTYEGDPIPMQRTHMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQF 340
++ G P+ + +T +I L ++F++E+QP P VLKT +F
Sbjct: 298 HLCQQLPIPG-PVEEMLAEVNATITDIISALVTSTFIIEKQP--------PQVLKTQTKF 348
Query: 341 TVKLRLLI--KLPELNYQVKVKASI-----DKNVSTLSNRRFVLCGTNVKAMSIEE--SS 391
+RLL+ KL +VKA+I K++ N R G + + E +
Sbjct: 349 AATVRLLVGGKLNVHMNPPQVKATIISEQQAKSLLKNENTRNECSGEILNNCCVMEYHQA 408
Query: 392 NGSLSVEFRHLQPKEMKSSAGGKGNEGCHMVTEELHSITFETQICLYG--LTIDLETSSL 449
G+LS FR++ K +K + G VTEE ++ FE+Q + L ++T SL
Sbjct: 409 TGTLSAHFRNMSLKRIKRA----DRRGAESVTEEKFTVLFESQFSVGSNELVFQVKTLSL 464
Query: 450 PVVMISNVSQLPNAWASIIWYNVSTNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYV--G 507
PVV+I + SQ NA A+++W N + V F P QL E ++ +F + V
Sbjct: 465 PVVVIVHGSQDHNATATVLWDNAFAEPGR--VPFAVPDKVLWPQLCEALNMKFKAEVQSN 522
Query: 508 RGLNSDQLHMLAEKLTVQSS-----YSDGHLTWAKFCKEHLPGKSFTFWTWLEAILDLIK 562
RGL + L LA+KL SS YS ++W++F +E+LPG ++TFW W + +++++K
Sbjct: 523 RGLTKENLVFLAQKLFNNSSSHLEDYSGLSVSWSQFNRENLPGWNYTFWQWFDGVMEVLK 582
Query: 563 KHILPLWIDGYVMGFVSKEKERLLLKDKMPGTFLLRFSESHLGGITFTWVDHSESGEVRF 622
KH P W DG ++GFV+K++ LL +K GTFLLRFS+S +GGIT W +S E
Sbjct: 583 KHHKPHWNDGAILGFVNKQQAHDLLINKPDGTFLLRFSDSEIGGITIAW--KFDSPERNL 640
Query: 623 HSVEPYNKGRLSALPFADILRDYKVIMAENIPENPLKYLYPDIPKDKAFGKHYS 676
+++P+ S AD L D ++ Y++PD PKD+ F K+Y+
Sbjct: 641 WNLKPFTTRDFSIRSLADRLGDLSYLI----------YVFPDRPKDEVFSKYYT 684
>gi|23397678 signal transducer and activator of transcription 6
[Homo sapiens]
Length = 847
Score = 207 bits (528), Expect = 2e-53
Identities = 203/756 (26%), Positives = 328/756 (43%), Gaps = 120/756 (15%)
Query: 1 MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNET----MATIL 56
MS W V ++ E+V + Y D FP +RHLL W+E+Q WE ++ +A+ L
Sbjct: 1 MSLWGLVSKMPP---EKVQRLYVD-FPQHLRHLLGDWLESQPWEFLVGSDAFCCNLASAL 56
Query: 57 LQNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRIL 116
L + + L +G + +L + L+ + +P+ + L+ E++ +
Sbjct: 57 LSDTVQHLQASVGEQGEGSTIL------QHISTLESIYQRDPLKLVATFRQILQGEKKAV 110
Query: 117 AAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYK 176
+ P + R ++H+V I E LQ +
Sbjct: 111 MEQFRHLPMPFHWKQEELKFKTGLRRLQHRVGEIH----------LLREALQKGAEAGQV 160
Query: 177 TIQTMDQSDKNSAMVNQEV-LTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNTMLIEEL 235
++ ++ ++ N ++ + + LQE L+ + ++++ +
Sbjct: 161 SLHSLIETPANGTGPSEALAMLLQETTGELEAAK-------------------ALVLKRI 201
Query: 236 QDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYEGDPIPM 295
Q WKR+QQ+A G P L LQ ESL + QL Q G+ P
Sbjct: 202 QIWKRQQQLAGNGAPFEESLAPLQE----RCESLVDIYSQL-----QQEVGAAGGELEPK 252
Query: 296 QRTHMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQFTVKLRLLIKLPELNY 355
R + R+ ++ L + F+VE+QP P VLKT +F +R L+ L L
Sbjct: 253 TRASLTGRLDEVLRTLVTSCFLVEKQP--------PQVLKTQTKFQAGVRFLLGLRFLGA 304
Query: 356 QVK---VKASI--DKNVSTLSNRRFVLCGTNVKAMSIEESSNGSLSVE-----------F 399
K V+A + +K LS V G A S E N ++ +E F
Sbjct: 305 PAKPPLVRADMVTEKQARELS----VPQGPGAGAESTGEIINNTVPLENSIPGNCCSALF 360
Query: 400 RHLQPKEMKSSAGGKGNEGCHMVTEELHSITFETQICLYG--LTIDLETSSLPVVMISNV 457
++L K++K +G VTEE ++ F L L I L+ SLP+V+I +
Sbjct: 361 KNLLLKKIKRCE----RKGTESVTEEKCAVLFSASFTLGPGKLPIQLQALSLPLVVIVHG 416
Query: 458 SQLPNAWASIIWYNV-STNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVG--RGLNSDQ 514
+Q NA A+I+W N S D V P ++ E ++ +F + VG RGL +
Sbjct: 417 NQDNNAKATILWDNAFSEMDRVPFVVAERVP---WEKMCETLNLKFMAEVGTNRGLLPEH 473
Query: 515 LHMLAEKLTVQSSYS-----DGHLTWAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLW 569
LA+K+ +S S ++W++F KE L G+ FTFW W + +LDL K+ + W
Sbjct: 474 FLFLAQKIFNDNSLSMEAFQHRSVSWSQFNKEILLGRGFTFWQWFDGVLDLTKRCLRSYW 533
Query: 570 IDGYVMGFVSKEKERLLLKDKMPGTFLLRFSESHLGGITFTWVDHSESGEVRFHSVEPYN 629
D ++GF+SK+ LL ++ GTFLLRFS+S +GGIT V + G + +++P++
Sbjct: 534 SDRLIIGFISKQYVTSLLLNEPDGTFLLRFSDSEIGGITIAHVIRGQDGSPQIENIQPFS 593
Query: 630 KGRLSALPFADILRDYKVIMAENIPENPLKYLYPDIPKDKAFGKHYSSQPCEVSRPTERG 689
LS D +RD LK LYP PKD+AF HY +P + G
Sbjct: 594 AKDLSIRSLGDRIRDLA----------QLKNLYPKKPKDEAFRSHY--------KPEQMG 635
Query: 690 --DKGYVPSVFIPISTIRSDSTEPHSPSDLLPMSPS 723
+GYVP+ T+ D P + M PS
Sbjct: 636 KDGRGYVPATI--KMTVERDQPLPTPELQMPTMVPS 669
>gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo
sapiens]
Length = 1185
Score = 43.9 bits (102), Expect = 5e-04
Identities = 59/258 (22%), Positives = 98/258 (37%), Gaps = 16/258 (6%)
Query: 56 LLQNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCL--REER 113
L + L L ++ ++KE N+ L+R ++ + K N + + CL R ER
Sbjct: 78 LQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHER 137
Query: 114 RI-LAAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFD 172
+ + Q P S + + + EH A + + + L++E
Sbjct: 138 SLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERCSLLEEELG 197
Query: 173 YRYKTIQTMDQSDKNSAMVNQEVLTL---QEMLNSLDFKRKEALSKMTQIIHETDLLMNT 229
+K + + + + + VL + QE S KR S + HE DL
Sbjct: 198 ATHKELMILKEQNNQKKTLTDGVLDINHEQENTPSTSGKR----SSDGSLSHEEDLAKVI 253
Query: 230 MLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYE 289
L E + R Q + L L + T L E L R+ L K EE +TK+ +
Sbjct: 254 ELQEIISKQSREQS------QMKERLASLSSHVTELEEDLDTARKDLIKSEEMNTKLQRD 307
Query: 290 GDPIPMQRTHMLERVTFL 307
Q+ M ER+T L
Sbjct: 308 VREAMAQKEDMEERITTL 325
>gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo
sapiens]
Length = 1202
Score = 43.9 bits (102), Expect = 5e-04
Identities = 59/258 (22%), Positives = 98/258 (37%), Gaps = 16/258 (6%)
Query: 56 LLQNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCL--REER 113
L + L L ++ ++KE N+ L+R ++ + K N + + CL R ER
Sbjct: 78 LQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHER 137
Query: 114 RI-LAAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFD 172
+ + Q P S + + + EH A + + + L++E
Sbjct: 138 SLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERCSLLEEELG 197
Query: 173 YRYKTIQTMDQSDKNSAMVNQEVLTL---QEMLNSLDFKRKEALSKMTQIIHETDLLMNT 229
+K + + + + + VL + QE S KR S + HE DL
Sbjct: 198 ATHKELMILKEQNNQKKTLTDGVLDINHEQENTPSTSGKR----SSDGSLSHEEDLAKVI 253
Query: 230 MLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQSTKMTYE 289
L E + R Q + L L + T L E L R+ L K EE +TK+ +
Sbjct: 254 ELQEIISKQSREQS------QMKERLASLSSHVTELEEDLDTARKDLIKSEEMNTKLQRD 307
Query: 290 GDPIPMQRTHMLERVTFL 307
Q+ M ER+T L
Sbjct: 308 VREAMAQKEDMEERITTL 325
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 42.0 bits (97), Expect = 0.002
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 110 REERRILAAANMPVQGPLEK-SLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQ 168
R++R + AAA ++G L+ LQ+ S ++ + AIK ++ Q + +L+
Sbjct: 1609 RKQRALAAAAKKKLEGDLKDLELQADSA------IKGREEAIKQLRKLQAQMKDFQRELE 1662
Query: 169 DEFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMN 228
D R + T +++K + + +++ LQE L + + RK+A + ++ E L +
Sbjct: 1663 DARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEE--LASS 1720
Query: 229 TMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQ 282
LQD KRR + L L++ Q +++ + + +Q E+L +
Sbjct: 1721 LSGRNALQDEKRRLEARI--AQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNE 1772
Score = 33.9 bits (76), Expect = 0.57
Identities = 47/264 (17%), Positives = 105/264 (39%), Gaps = 39/264 (14%)
Query: 58 QNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILA 117
+N L +L+++ ++++EKNLL ++ LQ + ++ EE R+
Sbjct: 872 ENELKELEQKHSQLTEEKNLL--------QEQLQAE---TELYAEA-------EEMRVRL 913
Query: 118 AANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKT 177
AA + +++ E R + + K + QM + + E L++E R K
Sbjct: 914 AAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLE----EQLEEEEAARQKL 969
Query: 178 IQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRK-----------------EALSKMTQII 220
++ + E+L + + N L +RK E +T++
Sbjct: 970 QLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLK 1029
Query: 221 HETDLLMNTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLE 280
++ + +++ + + ++ K RQ++ + L L + +L+ QL K E
Sbjct: 1030 NKHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKE 1089
Query: 281 EQSTKMTYEGDPIPMQRTHMLERV 304
E+ D Q+ + L+++
Sbjct: 1090 EELQAALARLDDEIAQKNNALKKI 1113
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 42.0 bits (97), Expect = 0.002
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 110 REERRILAAANMPVQGPLEK-SLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQ 168
R++R + AAA ++G L+ LQ+ S ++ + AIK ++ Q + +L+
Sbjct: 1616 RKQRALAAAAKKKLEGDLKDLELQADSA------IKGREEAIKQLRKLQAQMKDFQRELE 1669
Query: 169 DEFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMN 228
D R + T +++K + + +++ LQE L + + RK+A + ++ E L +
Sbjct: 1670 DARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEE--LASS 1727
Query: 229 TMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQ 282
LQD KRR + L L++ Q +++ + + +Q E+L +
Sbjct: 1728 LSGRNALQDEKRRLEARI--AQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNE 1779
Score = 33.9 bits (76), Expect = 0.57
Identities = 47/264 (17%), Positives = 105/264 (39%), Gaps = 39/264 (14%)
Query: 58 QNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILA 117
+N L +L+++ ++++EKNLL ++ LQ + ++ EE R+
Sbjct: 879 ENELKELEQKHSQLTEEKNLL--------QEQLQAE---TELYAEA-------EEMRVRL 920
Query: 118 AANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKT 177
AA + +++ E R + + K + QM + + E L++E R K
Sbjct: 921 AAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLE----EQLEEEEAARQKL 976
Query: 178 IQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRK-----------------EALSKMTQII 220
++ + E+L + + N L +RK E +T++
Sbjct: 977 QLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLK 1036
Query: 221 HETDLLMNTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLE 280
++ + +++ + + ++ K RQ++ + L L + +L+ QL K E
Sbjct: 1037 NKHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKE 1096
Query: 281 EQSTKMTYEGDPIPMQRTHMLERV 304
E+ D Q+ + L+++
Sbjct: 1097 EELQAALARLDDEIAQKNNALKKI 1120
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 42.0 bits (97), Expect = 0.002
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 110 REERRILAAANMPVQGPLEK-SLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQ 168
R++R + AAA ++G L+ LQ+ S ++ + AIK ++ Q + +L+
Sbjct: 1616 RKQRALAAAAKKKLEGDLKDLELQADSA------IKGREEAIKQLRKLQAQMKDFQRELE 1669
Query: 169 DEFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMN 228
D R + T +++K + + +++ LQE L + + RK+A + ++ E L +
Sbjct: 1670 DARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEE--LASS 1727
Query: 229 TMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQ 282
LQD KRR + L L++ Q +++ + + +Q E+L +
Sbjct: 1728 LSGRNALQDEKRRLEARI--AQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNE 1779
Score = 33.9 bits (76), Expect = 0.57
Identities = 47/264 (17%), Positives = 105/264 (39%), Gaps = 39/264 (14%)
Query: 58 QNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILA 117
+N L +L+++ ++++EKNLL ++ LQ + ++ EE R+
Sbjct: 879 ENELKELEQKHSQLTEEKNLL--------QEQLQAE---TELYAEA-------EEMRVRL 920
Query: 118 AANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKT 177
AA + +++ E R + + K + QM + + E L++E R K
Sbjct: 921 AAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLE----EQLEEEEAARQKL 976
Query: 178 IQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRK-----------------EALSKMTQII 220
++ + E+L + + N L +RK E +T++
Sbjct: 977 QLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLK 1036
Query: 221 HETDLLMNTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLE 280
++ + +++ + + ++ K RQ++ + L L + +L+ QL K E
Sbjct: 1037 NKHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKE 1096
Query: 281 EQSTKMTYEGDPIPMQRTHMLERV 304
E+ D Q+ + L+++
Sbjct: 1097 EELQAALARLDDEIAQKNNALKKI 1120
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 42.0 bits (97), Expect = 0.002
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 110 REERRILAAANMPVQGPLEK-SLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQ 168
R++R + AAA ++G L+ LQ+ S ++ + AIK ++ Q + +L+
Sbjct: 1609 RKQRALAAAAKKKLEGDLKDLELQADSA------IKGREEAIKQLRKLQAQMKDFQRELE 1662
Query: 169 DEFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMN 228
D R + T +++K + + +++ LQE L + + RK+A + ++ E L +
Sbjct: 1663 DARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEE--LASS 1720
Query: 229 TMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQ 282
LQD KRR + L L++ Q +++ + + +Q E+L +
Sbjct: 1721 LSGRNALQDEKRRLEARI--AQLEEELEEEQGNMEAMSDRVRKATQQAEQLSNE 1772
Score = 33.9 bits (76), Expect = 0.57
Identities = 47/264 (17%), Positives = 105/264 (39%), Gaps = 39/264 (14%)
Query: 58 QNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILA 117
+N L +L+++ ++++EKNLL ++ LQ + ++ EE R+
Sbjct: 872 ENELKELEQKHSQLTEEKNLL--------QEQLQAE---TELYAEA-------EEMRVRL 913
Query: 118 AANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKT 177
AA + +++ E R + + K + QM + + E L++E R K
Sbjct: 914 AAKKQELEEILHEMEARLEEEEDRGQQLQAERKKMAQQMLDLE----EQLEEEEAARQKL 969
Query: 178 IQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRK-----------------EALSKMTQII 220
++ + E+L + + N L +RK E +T++
Sbjct: 970 QLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLK 1029
Query: 221 HETDLLMNTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLE 280
++ + +++ + + ++ K RQ++ + L L + +L+ QL K E
Sbjct: 1030 NKHESMISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKE 1089
Query: 281 EQSTKMTYEGDPIPMQRTHMLERV 304
E+ D Q+ + L+++
Sbjct: 1090 EELQAALARLDDEIAQKNNALKKI 1113
>gi|212276078 leucine rich repeat (in FLII) interacting protein 1
isoform 1 [Homo sapiens]
Length = 640
Score = 41.2 bits (95), Expect = 0.004
Identities = 42/217 (19%), Positives = 92/217 (42%), Gaps = 19/217 (8%)
Query: 5 NQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWEAASNNETMATILLQNLLIQL 64
+Q+Q +E K+++ + + D +E ++ A + N + N L+++L++L
Sbjct: 272 DQIQDVEGKYMQGLKEMKDSLAEVEEKYKKAM-VSNAQLDNEKTNFMYQVDTLKDMLLEL 330
Query: 65 DEQLG---RVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRILAAANM 121
+EQL R +EKN K +LQ +F + L++ +L
Sbjct: 331 EEQLAESRRQYEEKNKEFERE-KHAHSILQFQF--------AEVKEALKQREEMLEEIRQ 381
Query: 122 PVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQTM 181
Q + S + E + K+ A++ + + +DL++E +
Sbjct: 382 LQQKQASSIREISDLQETIEWKDKKIGALERQKEFFDSVRSERDDLREE------VVMLK 435
Query: 182 DQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQ 218
++ K+ ++N E+ T E ++L+ + +KMT+
Sbjct: 436 EELKKHGIILNSEIATNGETSDTLNNVGYQGPTKMTK 472
>gi|126362969 Nck-associated protein 5 isoform 2 [Homo sapiens]
Length = 590
Score = 39.3 bits (90), Expect = 0.013
Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 53/245 (21%)
Query: 57 LQNLLIQLDEQLGRVSKEKNLLLIHNLKR--IRKVLQGKFHGNPMHVAVVISNCLREERR 114
+++LL QL+EQ + +EK L + L+R ++ +G H +H L EER
Sbjct: 32 IEHLLTQLEEQHRSLWREK--LAVARLQREVAQRTSEGAMHEKLIHE-------LEEERH 82
Query: 115 ILAAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYR 174
+ + EK LQ ++ +N +QM LQ +F
Sbjct: 83 LRLQS--------EKRLQEVTLESE-----------RNRIQM--------RSLQQQFSRM 115
Query: 175 YKTIQTMDQSDKNSAMVNQE---VLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNT-- 229
+T++ + QS + +E ++ QE L+ + K KEAL + ++ E ++
Sbjct: 116 EETVRNLLQSQGSPEQKKEETVNIMVYQEKLSEEERKHKEALEDLHMVVDEDSRSESSST 175
Query: 230 --------MLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEE 281
+L+E L+ + + N +Q + C +A + Q + L E
Sbjct: 176 DEGKEKTKLLLERLKALEAENSALALEN--ENQREQYERCLDEVANQVVQALLTQKDLRE 233
Query: 282 QSTKM 286
+ K+
Sbjct: 234 ECVKL 238
>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
Length = 1909
Score = 39.3 bits (90), Expect = 0.013
Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 53/245 (21%)
Query: 57 LQNLLIQLDEQLGRVSKEKNLLLIHNLKR--IRKVLQGKFHGNPMHVAVVISNCLREERR 114
+++LL QL+EQ + +EK L + L+R ++ +G H +H L EER
Sbjct: 32 IEHLLTQLEEQHRSLWREK--LAVARLQREVAQRTSEGAMHEKLIHE-------LEEERH 82
Query: 115 ILAAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYR 174
+ + EK LQ ++ +N +QM LQ +F
Sbjct: 83 LRLQS--------EKRLQEVTLESE-----------RNRIQM--------RSLQQQFSRM 115
Query: 175 YKTIQTMDQSDKNSAMVNQE---VLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNT-- 229
+T++ + QS + +E ++ QE L+ + K KEAL + ++ E ++
Sbjct: 116 EETVRNLLQSQGSPEQKKEETVNIMVYQEKLSEEERKHKEALEDLHMVVDEDSRSESSST 175
Query: 230 --------MLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEE 281
+L+E L+ + + N +Q + C +A + Q + L E
Sbjct: 176 DEGKEKTKLLLERLKALEAENSALALEN--ENQREQYERCLDEVANQVVQALLTQKDLRE 233
Query: 282 QSTKM 286
+ K+
Sbjct: 234 ECVKL 238
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 39.3 bits (90), Expect = 0.013
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 110 REERRILAAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQD 169
R++R + AA ++G LE+ L++ S Q E A+K +M Q + ++++
Sbjct: 1634 RKQRTLAVAARKKLEGELEE-LKAQMASAGQGKEE----AVKQLRKMQAQMKELWREVEE 1688
Query: 170 EFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHE--TDLLM 227
R + +S+K + EVL LQE L + D R++A ++ E L
Sbjct: 1689 TRTSREEIFSQNRESEKRLKGLEAEVLRLQEELAASDRARRQAQQDRDEMADEVANGNLS 1748
Query: 228 NTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKL 279
++EE ++Q+ G L L++ Q+ LL + +L Q+E L
Sbjct: 1749 KAAILEE------KRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQVESL 1794
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 39.3 bits (90), Expect = 0.013
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 110 REERRILAAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQD 169
R++R + AA ++G LE+ L++ S Q E A+K +M Q + ++++
Sbjct: 1626 RKQRTLAVAARKKLEGELEE-LKAQMASAGQGKEE----AVKQLRKMQAQMKELWREVEE 1680
Query: 170 EFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHE--TDLLM 227
R + +S+K + EVL LQE L + D R++A ++ E L
Sbjct: 1681 TRTSREEIFSQNRESEKRLKGLEAEVLRLQEELAASDRARRQAQQDRDEMADEVANGNLS 1740
Query: 228 NTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKL 279
++EE ++Q+ G L L++ Q+ LL + +L Q+E L
Sbjct: 1741 KAAILEE------KRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQVESL 1786
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 39.3 bits (90), Expect = 0.013
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 110 REERRILAAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQD 169
R++R + AA ++G LE+ L++ S Q E A+K +M Q + ++++
Sbjct: 1667 RKQRTLAVAARKKLEGELEE-LKAQMASAGQGKEE----AVKQLRKMQAQMKELWREVEE 1721
Query: 170 EFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHE--TDLLM 227
R + +S+K + EVL LQE L + D R++A ++ E L
Sbjct: 1722 TRTSREEIFSQNRESEKRLKGLEAEVLRLQEELAASDRARRQAQQDRDEMADEVANGNLS 1781
Query: 228 NTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKL 279
++EE ++Q+ G L L++ Q+ LL + +L Q+E L
Sbjct: 1782 KAAILEE------KRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQVESL 1827
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 38.5 bits (88), Expect = 0.023
Identities = 53/249 (21%), Positives = 109/249 (43%), Gaps = 25/249 (10%)
Query: 44 EAASNNETMATILLQNLLIQLDEQ----LGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPM 99
+ AS + T+ N IQ +Q L + +KEK L L++ + QG H
Sbjct: 499 QVASLTSELTTL---NATIQQQDQELAGLKQQAKEKQAQLAQTLQQQEQASQGLRH---- 551
Query: 100 HVAVVISNCLREERRILAAANMPVQGPLEKSLQ-SSSVSERQRNVEHKVAAIKNSVQMTE 158
V + S+ ++E+++ A + + Q +++ ER+ ++ + AA+K + +
Sbjct: 552 QVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERDAALKQLEALEK 611
Query: 159 QDTKYLEDLQDEF----DYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALS 214
+ LE LQ + + R ++ Q+ + A ++++V LQ + + ++ EA +
Sbjct: 612 EKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQA 671
Query: 215 KMTQIIHETDLLMNTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESL-FQLR 273
++ + + L E Q ++++A L L L+ + SL + R
Sbjct: 672 QVAE--------LELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKVTKGSLEEEKR 723
Query: 274 RQLEKLEEQ 282
R + LEEQ
Sbjct: 724 RAADALEEQ 732
>gi|148612801 KIAA1009 protein [Homo sapiens]
Length = 1403
Score = 38.5 bits (88), Expect = 0.023
Identities = 37/193 (19%), Positives = 92/193 (47%), Gaps = 20/193 (10%)
Query: 63 QLDEQLGRVSKEKNLLLIHN---LKRIRKVLQGKFHGNPMHVAVVISNCLREERRILAAA 119
+L +L + EKN L + + + + ++ H+A + ++ RE ++L
Sbjct: 1178 RLKNELEGLISEKNELKMKSEAVMNQFENSMRRVKEDTAAHIASLKASHQREIEKLLC-- 1235
Query: 120 NMPVQGPLEKSLQSSSVSERQRNVEHKVAAIK------NSVQMTEQDTKYLEDLQDEFDY 173
Q +E S SS V+E R + + I+ N +Q ++Q++ + ++++E
Sbjct: 1236 ----QNAVENS--SSKVAELNRKIATQEVLIRHFQSQVNELQ-SKQESLVVSEVREEILQ 1288
Query: 174 RY--KTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLLMNTML 231
+ K ++ + ++ +N + + L++ + ++ + + ++ QII +T ++ T
Sbjct: 1289 KEITKLLEELREAKENHTPEMKHFVGLEKKIKQMEMRHAQREQELQQIIQQTHQVVETEQ 1348
Query: 232 IEELQDWKRRQQI 244
+E++ WKR Q+
Sbjct: 1349 NKEVEKWKRLAQL 1361
Score = 30.8 bits (68), Expect = 4.8
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 151 KNSVQMTEQDTKYLE-DLQDEFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEM-----LNS 204
KN+V+ E+ K LE DL+ + + K+++TM+Q + + ++ L QE LN
Sbjct: 959 KNTVEFMEKRIKKLEADLEGKDEDAKKSLRTMEQQFQKMKIQYEQRLEQQEQLLACKLNQ 1018
Query: 205 LDFKRKEALSKMTQIIHE 222
D R +AL K I E
Sbjct: 1019 HDSPRIKALEKELDDIKE 1036
>gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo
sapiens]
Length = 805
Score = 36.2 bits (82), Expect = 0.11
Identities = 50/240 (20%), Positives = 105/240 (43%), Gaps = 29/240 (12%)
Query: 51 TMATILLQNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLR 110
T+ + Q+L +Q+ E+ + +E + L+ I+K Q K ++ C +
Sbjct: 520 TLDDVQSQSLQLQILEEKNKNLQEALIDTEKKLEEIKKQCQDK------ETQLI---CQK 570
Query: 111 EERRILAAANMPVQGPLEKSLQSS----SVSERQRNVEHKVAAIKNSVQMTEQDTKYLED 166
++ + L +Q +E+ L+ + +Q E+ N Q E +K ++
Sbjct: 571 KKEKELVTTVQSLQQKVERCLEDGIRLPMLDAKQLQNEND-----NLRQQNETASKIIDS 625
Query: 167 LQDEFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQIIHETDLL 226
QDE D IQ+M +++E LT Q+M+ L+ K++ + ++T+ + E
Sbjct: 626 QQDEIDRMILEIQSM------QGKLSKEKLTTQKMMEELE-KKERNVQRLTKALLENQRQ 678
Query: 227 MN---TMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKLEEQS 283
+ ++L + + + RQQ PL + L + F ++ LF L+ L +++
Sbjct: 679 TDETCSLLDQGQEPDQSRQQTVLSKRPLFD-LTVIDQLFKEMSCCLFDLKALCSILNQRA 737
>gi|24307983 FtsJ methyltransferase domain containing 2 [Homo
sapiens]
Length = 835
Score = 35.8 bits (81), Expect = 0.15
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 127 LEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQDTKYLEDLQDEFDYRYKTIQTMDQSDK 186
L SL S+S E +V H A S+ ++ +T+ + D FD +K ++ +
Sbjct: 23 LALSLSSTSDDEPPSSVSHGAKASTTSLSGSDSETEGKQHSSDSFDDAFKADSLVEGTSS 82
Query: 187 NSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQ 218
+M N Q+++ + F+ E L K +Q
Sbjct: 83 RYSMYNS---VSQKLMAKMGFREGEGLGKYSQ 111
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 35.8 bits (81), Expect = 0.15
Identities = 73/392 (18%), Positives = 151/392 (38%), Gaps = 84/392 (21%)
Query: 50 ETMATILLQNLLIQLDEQLGRVSKEKNLLLIH--NLK--------RIRKVLQGKFHGNPM 99
ET ++ Q + +L +Q+ V +EK +L I NLK + KV Q K
Sbjct: 133 ETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEK------ 186
Query: 100 HVAVVISNCLREERRILAAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQ 159
V+++ + E+R++L N +E+ + E ++++ K + + + +
Sbjct: 187 ---TVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFIEQN 243
Query: 160 DTKYLEDLQDEFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQI 219
K + S ++ Q + Q++L +LD +K+TQ
Sbjct: 244 KLK-----------------------RQSHLLLQSSIPDQQLLKALDEN-----AKLTQQ 275
Query: 220 IHETDLLMNTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKL 279
+ E + + + ++EL++ + LH + L+ LL E +L + +
Sbjct: 276 LEE-ERIQHQQKVKELEEQLENET-------LHKEIHNLKQQLELLEEDKKELELKYQNS 327
Query: 280 EEQSTKMTYEGDPIPMQRTHMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQ 339
EE++ + + D + + N +NS P P P P +++L+
Sbjct: 328 EEKARNLKHSVDELQKR------------VNQSENSVPPPPPPPPPLPPPPPNPIRSLMS 375
Query: 340 FTVKLRLLIKLPELNYQVKVKASIDKNVSTLSNRRFVLCGTNVKAMSIEESSNGSLSVEF 399
K P + K KA+ + + T++K ++EE + +
Sbjct: 376 MIRKR----SHPSGSGAKKEKATQPETTEEV---------TDLKRQAVEEMMD--RIKKG 420
Query: 400 RHLQP--KEMKSSAGGKGNEGCHMVTEELHSI 429
HL+P + + + ++GC +EL I
Sbjct: 421 VHLRPVNQTARPKTKPESSKGCESAVDELKGI 452
>gi|50511340 shootin1 isoform b [Homo sapiens]
Length = 456
Score = 35.8 bits (81), Expect = 0.15
Identities = 73/392 (18%), Positives = 151/392 (38%), Gaps = 84/392 (21%)
Query: 50 ETMATILLQNLLIQLDEQLGRVSKEKNLLLIH--NLK--------RIRKVLQGKFHGNPM 99
ET ++ Q + +L +Q+ V +EK +L I NLK + KV Q K
Sbjct: 133 ETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEK------ 186
Query: 100 HVAVVISNCLREERRILAAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQ 159
V+++ + E+R++L N +E+ + E ++++ K + + + +
Sbjct: 187 ---TVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFIEQN 243
Query: 160 DTKYLEDLQDEFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQI 219
K + S ++ Q + Q++L +LD +K+TQ
Sbjct: 244 KLK-----------------------RQSHLLLQSSIPDQQLLKALDEN-----AKLTQQ 275
Query: 220 IHETDLLMNTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQLEKL 279
+ E + + + ++EL++ + LH + L+ LL E +L + +
Sbjct: 276 LEE-ERIQHQQKVKELEEQLENET-------LHKEIHNLKQQLELLEEDKKELELKYQNS 327
Query: 280 EEQSTKMTYEGDPIPMQRTHMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVLKTLIQ 339
EE++ + + D + + N +NS P P P P +++L+
Sbjct: 328 EEKARNLKHSVDELQKR------------VNQSENSVPPPPPPPPPLPPPPPNPIRSLMS 375
Query: 340 FTVKLRLLIKLPELNYQVKVKASIDKNVSTLSNRRFVLCGTNVKAMSIEESSNGSLSVEF 399
K P + K KA+ + + T++K ++EE + +
Sbjct: 376 MIRKR----SHPSGSGAKKEKATQPETTEEV---------TDLKRQAVEEMMD--RIKKG 420
Query: 400 RHLQP--KEMKSSAGGKGNEGCHMVTEELHSI 429
HL+P + + + ++GC +EL I
Sbjct: 421 VHLRPVNQTARPKTKPESSKGCESAVDELKGI 452
>gi|38570058 hypothetical protein LOC80129 [Homo sapiens]
Length = 715
Score = 35.4 bits (80), Expect = 0.19
Identities = 39/207 (18%), Positives = 88/207 (42%), Gaps = 34/207 (16%)
Query: 59 NLLIQLDEQLGRVSKE---KNLLLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREERRI 115
++++ EQL R+ +N + HNL+R K + + +H++++ + E
Sbjct: 459 DVVLARTEQLVRLESNAVIENKTIAHNLQRKLKTQKERLESKELHMSLLRQKIAQLEE-- 516
Query: 116 LAAANMPVQGPLEKSLQSSSVSERQ------RNVEHKVAAIKNSVQ-MTEQDTKYLEDLQ 168
EK +++ V ER RN++ KV ++ + + T+ L
Sbjct: 517 ------------EKQARTALVVERDNAHLTIRNLQKKVERLQKELNTCRDLHTELKAKLA 564
Query: 169 DEFDYRYKTIQ----------TMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQ 218
D + + KT++ + DQ +K +++++++ L++ + + KE +
Sbjct: 565 DTNELKIKTLEQTKAIEDLNKSRDQLEKMKEKAEKKLMSVKSELDTTEHEAKENKERARN 624
Query: 219 IIHETDLLMNTMLIEELQDWKRRQQIA 245
+I M T+ + KR +Q+A
Sbjct: 625 MIEVVTSEMKTLKKSLEEAEKREKQLA 651
>gi|7705415 hook homolog 1 [Homo sapiens]
Length = 728
Score = 35.4 bits (80), Expect = 0.19
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 19/128 (14%)
Query: 176 KTIQTMDQSDKNSAMVNQEVLTLQEMLNS--------LDFKRKEALSKMTQIIHETDLLM 227
+ I T+++S ++ M + L +E+L+S L+ + K AL ++ + + E + L
Sbjct: 139 QNIMTLEESVQHVVMTAIQELMSKEILSSPPNDAVGELEQQLKRALEELQEALAEKEELR 198
Query: 228 NT-----MLIEELQDWKRRQQIACIGGPLHNGLDQLQNCF----TLLAESLFQLRRQLEK 278
M + LQD K + ++ LDQL F T++A+ F + QLE+
Sbjct: 199 QRCEELDMQVTTLQDEKN--SLVSENEMMNEKLDQLDGSFDDPNTVVAKKYFHAQLQLEQ 256
Query: 279 LEEQSTKM 286
L+E++ ++
Sbjct: 257 LQEENFRL 264
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,865,364
Number of Sequences: 37866
Number of extensions: 1232747
Number of successful extensions: 4021
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 3851
Number of HSP's gapped (non-prelim): 217
length of query: 748
length of database: 18,247,518
effective HSP length: 110
effective length of query: 638
effective length of database: 14,082,258
effective search space: 8984480604
effective search space used: 8984480604
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.