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Search of human proteins with 4505705
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505705 phosphoprotein enriched in astrocytes 15 [Homo
sapiens]
(130 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505705 phosphoprotein enriched in astrocytes 15 [Homo sapiens] 258 7e-70
gi|122056476 caspase 8 isoform G precursor [Homo sapiens] 42 2e-04
gi|122056474 caspase 8 isoform C precursor [Homo sapiens] 42 2e-04
gi|15718712 caspase 8 isoform E [Homo sapiens] 42 2e-04
gi|15718708 caspase 8 isoform C precursor [Homo sapiens] 42 2e-04
gi|15718706 caspase 8 isoform B precursor [Homo sapiens] 42 2e-04
gi|15718704 caspase 8 isoform A precursor [Homo sapiens] 39 9e-04
gi|47078272 caspase 10 isoform d preproprotein [Homo sapiens] 36 0.008
gi|47078269 caspase 10 isoform b preproprotein [Homo sapiens] 36 0.008
gi|47078267 caspase 10 isoform a preproprotein [Homo sapiens] 36 0.008
gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo sa... 31 0.24
gi|194097352 actinin, alpha 1 isoform c [Homo sapiens] 30 0.41
gi|194097350 actinin, alpha 1 isoform a [Homo sapiens] 30 0.41
gi|4501891 actinin, alpha 1 isoform b [Homo sapiens] 30 0.41
gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo sapi... 30 0.41
gi|4557241 actinin, alpha 3 [Homo sapiens] 30 0.71
gi|21735548 centrosomal protein 2 [Homo sapiens] 29 1.2
gi|153791535 general control of amino acid synthesis 5-like 2 [H... 28 2.1
gi|9945318 MAX binding protein [Homo sapiens] 28 2.1
gi|111120331 PHD finger protein 20-like 1 isoform 1 [Homo sapiens] 28 2.7
gi|197333706 leucine rich repeat containing 8 family, member D [... 28 2.7
gi|34222199 leucine rich repeat containing 8 family, member D [H... 28 2.7
gi|148276990 zinc finger and BTB domain containing 38 [Homo sapi... 27 3.5
gi|154146189 dedicator of cytokinesis 10 [Homo sapiens] 27 3.5
gi|209870067 R3H domain and coiled-coil containing 1 [Homo sapiens] 27 3.5
gi|19923729 leucine rich repeat containing 8 family, member C [H... 27 4.6
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 27 4.6
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 27 4.6
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 27 6.0
gi|94721263 myotubularin related protein 12 [Homo sapiens] 27 6.0
>gi|4505705 phosphoprotein enriched in astrocytes 15 [Homo sapiens]
Length = 130
Score = 258 bits (660), Expect = 7e-70
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MAEYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNL 60
MAEYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNL
Sbjct: 1 MAEYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNL 60
Query: 61 SYIEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEEEI 120
SYIEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEEEI
Sbjct: 61 SYIEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEEEI 120
Query: 121 IKLAPPPKKA 130
IKLAPPPKKA
Sbjct: 121 IKLAPPPKKA 130
>gi|122056476 caspase 8 isoform G precursor [Homo sapiens]
Length = 538
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 3 EYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSY 62
++ L D+ + EDL LK + IP K E I F L+ L++ NLS+
Sbjct: 61 DFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSF 120
Query: 63 IEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEE 118
++ + R DLL ++ R EE E + + Y+ ++ Q SEE
Sbjct: 121 LKELLFRINRLDLLITYLNTR------KEEMERELQTPGRAQISAYRVMLYQISEE 170
>gi|122056474 caspase 8 isoform C precursor [Homo sapiens]
Length = 464
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 3 EYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSY 62
++ L D+ + EDL LK + IP K E I F L+ L++ NLS+
Sbjct: 2 DFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSF 61
Query: 63 IEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEE 118
++ + R DLL ++ R EE E + + Y+ ++ Q SEE
Sbjct: 62 LKELLFRINRLDLLITYLNTR------KEEMERELQTPGRAQISAYRVMLYQISEE 111
>gi|15718712 caspase 8 isoform E [Homo sapiens]
Length = 235
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 3 EYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSY 62
++ L D+ + EDL LK + IP K E I F L+ L++ NLS+
Sbjct: 2 DFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSF 61
Query: 63 IEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEE 118
++ + R DLL ++ R EE E + + Y+ ++ Q SEE
Sbjct: 62 LKELLFRINRLDLLITYLNTR------KEEMERELQTPGRAQISAYRVMLYQISEE 111
>gi|15718708 caspase 8 isoform C precursor [Homo sapiens]
Length = 464
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 3 EYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSY 62
++ L D+ + EDL LK + IP K E I F L+ L++ NLS+
Sbjct: 2 DFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSF 61
Query: 63 IEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEE 118
++ + R DLL ++ R EE E + + Y+ ++ Q SEE
Sbjct: 62 LKELLFRINRLDLLITYLNTR------KEEMERELQTPGRAQISAYRVMLYQISEE 111
>gi|15718706 caspase 8 isoform B precursor [Homo sapiens]
Length = 479
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 3 EYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSY 62
++ L D+ + EDL LK + IP K E I F L+ L++ NLS+
Sbjct: 2 DFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSF 61
Query: 63 IEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEE 118
++ + R DLL ++ R EE E + + Y+ ++ Q SEE
Sbjct: 62 LKELLFRINRLDLLITYLNTR------KEEMERELQTPGRAQISAYRVMLYQISEE 111
>gi|15718704 caspase 8 isoform A precursor [Homo sapiens]
Length = 496
Score = 39.3 bits (90), Expect = 9e-04
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 3 EYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSY 62
++ L D+ + EDL LK + IP K E I F L+ L++ NLS+
Sbjct: 2 DFSRNLYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSF 61
Query: 63 IEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDT 97
++ + R DLL ++ R K E EL T
Sbjct: 62 LKELLFRINRLDLLITYLNTR----KEEMERELQT 92
>gi|47078272 caspase 10 isoform d preproprotein [Homo sapiens]
Length = 522
Score = 36.2 bits (82), Expect = 0.008
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 4 YGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSYI 63
+ LL +L+ I E+L+ + K+ +P + T ++ +FLE K+D+DNL+ +
Sbjct: 115 FRNLLYELSEGIDSENLKDMIFLLKDSLPKTEM----TSLSFLAFLEKQGKIDEDNLTCL 170
Query: 64 EHIFEISRRPDLLTMVVDYR 83
E + + + P LL + Y+
Sbjct: 171 EDLCK-TVVPKLLRNIEKYK 189
Score = 33.9 bits (76), Expect = 0.037
Identities = 17/66 (25%), Positives = 38/66 (57%)
Query: 11 LTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSYIEHIFEIS 70
+ +N+ ++D+E LK C +P++K E+ ++ S F L + + L +++ ++ + I
Sbjct: 27 IDSNLGVQDVENLKFLCIGLVPNKKLEKSSSASDVFEHLLAEDLLSEEDPFFLAELLYII 86
Query: 71 RRPDLL 76
R+ LL
Sbjct: 87 RQKKLL 92
>gi|47078269 caspase 10 isoform b preproprotein [Homo sapiens]
Length = 521
Score = 36.2 bits (82), Expect = 0.008
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 4 YGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSYI 63
+ LL +L+ I E+L+ + K+ +P + T ++ +FLE K+D+DNL+ +
Sbjct: 115 FRNLLYELSEGIDSENLKDMIFLLKDSLPKTEM----TSLSFLAFLEKQGKIDEDNLTCL 170
Query: 64 EHIFEISRRPDLLTMVVDYR 83
E + + + P LL + Y+
Sbjct: 171 EDLCK-TVVPKLLRNIEKYK 189
Score = 33.9 bits (76), Expect = 0.037
Identities = 17/66 (25%), Positives = 38/66 (57%)
Query: 11 LTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSYIEHIFEIS 70
+ +N+ ++D+E LK C +P++K E+ ++ S F L + + L +++ ++ + I
Sbjct: 27 IDSNLGVQDVENLKFLCIGLVPNKKLEKSSSASDVFEHLLAEDLLSEEDPFFLAELLYII 86
Query: 71 RRPDLL 76
R+ LL
Sbjct: 87 RQKKLL 92
>gi|47078267 caspase 10 isoform a preproprotein [Homo sapiens]
Length = 479
Score = 36.2 bits (82), Expect = 0.008
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 4 YGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSYI 63
+ LL +L+ I E+L+ + K+ +P + T ++ +FLE K+D+DNL+ +
Sbjct: 115 FRNLLYELSEGIDSENLKDMIFLLKDSLPKTEM----TSLSFLAFLEKQGKIDEDNLTCL 170
Query: 64 EHIFEISRRPDLLTMVVDYR 83
E + + + P LL + Y+
Sbjct: 171 EDLCK-TVVPKLLRNIEKYK 189
Score = 33.9 bits (76), Expect = 0.037
Identities = 17/66 (25%), Positives = 38/66 (57%)
Query: 11 LTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSYIEHIFEIS 70
+ +N+ ++D+E LK C +P++K E+ ++ S F L + + L +++ ++ + I
Sbjct: 27 IDSNLGVQDVENLKFLCIGLVPNKKLEKSSSASDVFEHLLAEDLLSEEDPFFLAELLYII 86
Query: 71 RRPDLL 76
R+ LL
Sbjct: 87 RQKKLL 92
>gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo
sapiens]
Length = 601
Score = 31.2 bits (69), Expect = 0.24
Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 21/112 (18%)
Query: 4 YGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLD------- 56
+ T L + + E L S C K +T W SFLES K D
Sbjct: 249 FKTFLPETRIMTSAHGFEILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIE 308
Query: 57 -----KDNLSYIEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIP 103
++ L E+ F++S VD+ L +S +E+ T L IP
Sbjct: 309 GSAQYRERLEMAENYFQLS---------VDWPESSLAMSPGEEILTLLQTIP 351
>gi|194097352 actinin, alpha 1 isoform c [Homo sapiens]
Length = 887
Score = 30.4 bits (67), Expect = 0.41
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 57 KDNLSYIEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPS 116
KD L + I RP+L +DY K+ ++D L T A+KY DI +
Sbjct: 174 KDGLGFCALIHR--HRPEL----IDYG----KLRKDDPLTNLNTAFDVAEKYLDIPKMLD 223
Query: 117 EEEIIKLAPPPKKA 130
E+I+ A P +KA
Sbjct: 224 AEDIVGTARPDEKA 237
>gi|194097350 actinin, alpha 1 isoform a [Homo sapiens]
Length = 914
Score = 30.4 bits (67), Expect = 0.41
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 57 KDNLSYIEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPS 116
KD L + I RP+L +DY K+ ++D L T A+KY DI +
Sbjct: 174 KDGLGFCALIHR--HRPEL----IDYG----KLRKDDPLTNLNTAFDVAEKYLDIPKMLD 223
Query: 117 EEEIIKLAPPPKKA 130
E+I+ A P +KA
Sbjct: 224 AEDIVGTARPDEKA 237
>gi|4501891 actinin, alpha 1 isoform b [Homo sapiens]
Length = 892
Score = 30.4 bits (67), Expect = 0.41
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 57 KDNLSYIEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPS 116
KD L + I RP+L +DY K+ ++D L T A+KY DI +
Sbjct: 174 KDGLGFCALIHR--HRPEL----IDYG----KLRKDDPLTNLNTAFDVAEKYLDIPKMLD 223
Query: 117 EEEIIKLAPPPKKA 130
E+I+ A P +KA
Sbjct: 224 AEDIVGTARPDEKA 237
>gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo
sapiens]
Length = 644
Score = 30.4 bits (67), Expect = 0.41
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 21/95 (22%)
Query: 21 EQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLD------------KDNLSYIEHIFE 68
E L S C K +T W SFLES K D ++ L E+ F+
Sbjct: 309 EILCSKCSPHFSDCKKSLVTASPLWASFLESLKKNDYFKGLIEGSAQYRERLEMAENYFQ 368
Query: 69 ISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIP 103
+S VD+ L +S +E+ T L IP
Sbjct: 369 LS---------VDWPESSLAMSPGEEILTLLQTIP 394
>gi|4557241 actinin, alpha 3 [Homo sapiens]
Length = 901
Score = 29.6 bits (65), Expect = 0.71
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 72 RPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEEEIIKLAPPPKKA 130
RPDL +DY K+ ++D + T A+KY DI + E+I+ P +KA
Sbjct: 201 RPDL----IDYA----KLRKDDPIGNLNTAFEVAEKYLDIPKMLDAEDIVNTPKPDEKA 251
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 28.9 bits (63), Expect = 1.2
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 26/93 (27%)
Query: 34 EKSEEITTGSAWFSFLESHNKL--------DKDNLSYIEHIFEISRRPDLLT-------- 77
E+S+E+ S+ LESH+ + D++ S E I E+ R+ + LT
Sbjct: 1599 ERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQ 1658
Query: 78 ----------MVVDYRTRVLKISEEDELDTKLT 100
++ D RTR KI EED KL+
Sbjct: 1659 ELMLQKERIQVLEDQRTRQTKILEEDLEQIKLS 1691
>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
sapiens]
Length = 837
Score = 28.1 bits (61), Expect = 2.1
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Query: 58 DNLSYIEHIFE--ISRRPDLLTMVVDYRTRVLKISEEDELDTK 98
D++S++E++ E I+R LL MVVD + + +E++ DTK
Sbjct: 156 DHVSHLENVSEDEINR---LLGMVVDVENLFMSVHKEEDTDTK 195
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 28.1 bits (61), Expect = 2.1
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 20 LEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSYIEHIFEISRRPDLLTMV 79
L LK A E++ S + ++ G E HNKL+K+ ++++ FE +R + V
Sbjct: 196 LGTLKLAPAEEVKSSEQKKRPGG---IGTREVHNKLEKNRRAHLKECFETLKRN--IPNV 250
Query: 80 VDYRTRVLKISEEDELDTKLTRIPSAKK 107
D +T L + L T L I S K+
Sbjct: 251 DDKKTSNLSV-----LRTALRYIQSLKR 273
>gi|111120331 PHD finger protein 20-like 1 isoform 1 [Homo sapiens]
Length = 1017
Score = 27.7 bits (60), Expect = 2.7
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 50 ESHNKLDKDNLSYIEHIF-EISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKY 108
+SH + + L++IE++ E++ R DL+ VD L + E E L R+P K++
Sbjct: 938 DSHLQWQLNLLTHIENVQNEVTSRMDLIEKEVDVLESWLDFTGELEPPDPLARLPQLKRH 997
>gi|197333706 leucine rich repeat containing 8 family, member D
[Homo sapiens]
Length = 858
Score = 27.7 bits (60), Expect = 2.7
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 30 DIPSEKSEEITTGSAW-FSFLESH---NKLDKDNLSYIEHIFEISRRPDLLTMVVDYRTR 85
++ K EI+ W F L H N DK L H+F +S PD + + D
Sbjct: 440 EVSENKLREISLNHEWTFEKLRQHISRNAQDKQEL----HLFMLSGVPDAVFDLTDLDVL 495
Query: 86 VLKISEEDELDTKLTRIPSAKK 107
L++ E ++ K++++ + ++
Sbjct: 496 KLELIPEAKIPAKISQMTNLQE 517
>gi|34222199 leucine rich repeat containing 8 family, member D [Homo
sapiens]
Length = 858
Score = 27.7 bits (60), Expect = 2.7
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 30 DIPSEKSEEITTGSAW-FSFLESH---NKLDKDNLSYIEHIFEISRRPDLLTMVVDYRTR 85
++ K EI+ W F L H N DK L H+F +S PD + + D
Sbjct: 440 EVSENKLREISLNHEWTFEKLRQHISRNAQDKQEL----HLFMLSGVPDAVFDLTDLDVL 495
Query: 86 VLKISEEDELDTKLTRIPSAKK 107
L++ E ++ K++++ + ++
Sbjct: 496 KLELIPEAKIPAKISQMTNLQE 517
>gi|148276990 zinc finger and BTB domain containing 38 [Homo
sapiens]
Length = 1195
Score = 27.3 bits (59), Expect = 3.5
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 9 QDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSY 62
QD N +T L+++ +DIP+ + + G+ W E K+D DN Y
Sbjct: 619 QDTVNTLTNSPAIPLETSACQDIPTSANVQNAEGTKWG---EEALKMDLDNNFY 669
>gi|154146189 dedicator of cytokinesis 10 [Homo sapiens]
Length = 2186
Score = 27.3 bits (59), Expect = 3.5
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 59 NLSYIEHIFEISRRPDLLTMVVDYRTRVLKISEEDELDTKLTRIPSAKKYKDIIRQPSEE 118
NL +E I I L ++++ +VL +EEDE+ T +TR+ DI+ + EE
Sbjct: 888 NLLNVEKIHAIM---SFLPIILNQLFKVLVQNEEDEITTTVTRV-----LTDIVAKCHEE 939
Query: 119 EI 120
++
Sbjct: 940 QL 941
>gi|209870067 R3H domain and coiled-coil containing 1 [Homo sapiens]
Length = 253
Score = 27.3 bits (59), Expect = 3.5
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 3 EYGTLLQDLTNNITLEDLEQLK-----SACKEDIPSEK 35
+Y LLQ++T+N+T ++++ K S+ E++P EK
Sbjct: 90 DYSELLQEITDNLTKKEIQIEKIHLDTSSFVEELPGEK 127
>gi|19923729 leucine rich repeat containing 8 family, member C [Homo
sapiens]
Length = 803
Score = 26.9 bits (58), Expect = 4.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 5 GTLLQDLTNNITLEDLEQLKS 25
G+L D++ N+TLE L LKS
Sbjct: 523 GSLSHDISRNVTLESLRDLKS 543
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 26.9 bits (58), Expect = 4.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 92 EDELDTKLTRIPSAKKYKDIIRQPSEEEIIKLAPPPKK 129
E++ DTK T I + ++Y + P+E+ II + P K
Sbjct: 1249 EEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSK 1286
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 26.9 bits (58), Expect = 4.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 92 EDELDTKLTRIPSAKKYKDIIRQPSEEEIIKLAPPPKK 129
E++ DTK T I + ++Y + P+E+ II + P K
Sbjct: 1283 EEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSK 1320
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 26.6 bits (57), Expect = 6.0
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 3 EYGTLLQ-DLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAW-FSFLESH 52
E+GT ++ + + E QL+ +E+ EK EEI TG A+ F+ +E++
Sbjct: 1100 EFGTKVEPEFETQLEPEFETQLEPEFEEEEEEEKEEEIATGQAFPFTTVETY 1151
>gi|94721263 myotubularin related protein 12 [Homo sapiens]
Length = 747
Score = 26.6 bits (57), Expect = 6.0
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 9 QDLTNN-ITLEDLEQLKSACKEDIPSEKSEEI-TTGSAWFSFLESHNKLD 56
+DL++N ++L++++ S K+ + S E T WFS LES + LD
Sbjct: 315 EDLSSNFLSLQEIQTAYSKFKQLFLIDNSTEFWDTDIKWFSLLESSSWLD 364
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,194,409
Number of Sequences: 37866
Number of extensions: 205378
Number of successful extensions: 533
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 511
Number of HSP's gapped (non-prelim): 36
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.