Guide to the Human Genome
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Name: PEA15 Sequence: fasta or formatted (130aa) NCBI GI: 4505705
Description:

phosphoprotein enriched in astrocytes 15

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6          6           1
 C cysteine            0.8          1           1
 D aspartate           7.7         10           1
 E glutamate          12.3         16           3
 F phenylalanine       2.3          3           1
 G glycine             1.5          2           1
 H histidine           1.5          2           1
 I isoleucine          9.2         12           2
 K lysine             10.0         13           2
 L leucine            11.5         15           2
 M methionine          1.5          2           1
 N asparagine          3.1          4           2
 P proline             5.4          7           3
 Q glutamine           2.3          3           1
 R arginine            4.6          6           2
 S serine              8.5         11           1
 T threonine           6.9          9           2
 V valine              2.3          3           2
 W tryptophan          0.8          1           1
 Y tyrosine            3.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphoprotein enriched in astrocytes 15 
CASP8                 0.073   caspase 8 isoform G precursor 
CASP8                 0.073   caspase 8 isoform C precursor 
CASP8                 0.073   caspase 8 isoform E 
CASP8                 0.073   caspase 8 isoform C precursor 
CASP8                 0.073   caspase 8 isoform B precursor 
CASP8                 0.060   caspase 8 isoform A precursor 
CASP10                0.047   caspase 10 isoform d preproprotein 
CASP10                0.047   caspase 10 isoform b preproprotein 
CASP10                0.047   caspase 10 isoform a preproprotein 
ECD                   0.026   suppressor of S. cerevisiae gcr2 isoform 3 
ACTN1                 0.021   actinin, alpha 1 isoform c 
ACTN1                 0.021   actinin, alpha 1 isoform a 
ACTN1                 0.021   actinin, alpha 1 isoform b 
ECD                   0.021   suppressor of S. cerevisiae gcr2 isoform 1 
ACTN3                 0.021   actinin, alpha 3 
CEP250                0.017   centrosomal protein 2 
KAT2A                 0.013   general control of amino acid synthesis 5-like 2 [H...
MNT                   0.013   MAX binding protein 
PHF20L1               0.013   PHD finger protein 20-like 1 isoform 1 
LRRC8D                0.013   leucine rich repeat containing 8 family, member D [...
LRRC8D                0.013   leucine rich repeat containing 8 family, member D [H...
ZBTB38                0.009   zinc finger and BTB domain containing 38 
DOCK10                0.009   dedicator of cytokinesis 10 
R3HCC1                0.009   R3H domain and coiled-coil containing 1 
LRRC8C                0.009   leucine rich repeat containing 8 family, member C [H...
RBBP6                 0.009   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.009   retinoblastoma-binding protein 6 isoform 1 
AEBP1                 0.009   adipocyte enhancer binding protein 1 precursor [Homo...
MTMR12                0.009   myotubularin related protein 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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