Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZBTB38 Sequence: fasta or formatted (1195aa) NCBI GI: 148276990
Description:

zinc finger and BTB domain containing 38

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         69           3
 C cysteine            3.5         42           2
 D aspartate           4.3         51           2
 E glutamate           7.4         88           4
 F phenylalanine       3.4         41           1
 G glycine             4.7         56           2
 H histidine           3.8         46           1
 I isoleucine          4.2         50           2
 K lysine              7.4         88           3
 L leucine             6.8         81           2
 M methionine          1.9         23           1
 N asparagine          5.9         70           2
 P proline             6.2         74           4
 Q glutamine           4.1         49           2
 R arginine            5.2         62           2
 S serine             10.3        123           2
 T threonine           5.9         71           2
 V valine              5.4         65           3
 W tryptophan          0.5          6           1
 Y tyrosine            3.3         40           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 38 
ZBTB33                0.081   kaiso 
ZBTB4                 0.080   zinc finger and BTB domain containing 4 
ZBTB4                 0.080   zinc finger and BTB domain containing 4 
ZNF700                0.052   zinc finger protein 700 
ZNF709                0.051   zinc finger protein 709 isoform b 
ZNF709                0.051   zinc finger protein 709 isoform a 
ZNF670                0.050   zinc finger protein 670 
ZNF782                0.050   zinc finger protein 782 
ZNF14                 0.050   zinc finger protein 14 
ZNF226                0.049   zinc finger protein 226 isoform a 
ZNF226                0.049   zinc finger protein 226 isoform a 
ZNF136                0.049   zinc finger protein 136 
LOC646864             0.049   PREDICTED: similar to hCG36734 
LOC646864             0.049   PREDICTED: similar to hCG36734 
LOC646864             0.049   PREDICTED: similar to hCG36734 
ZNF679                0.048   zinc finger protein 679 
ZNF93                 0.048   zinc finger protein 93 
ZNF157                0.048   zinc finger protein 157 
ZNF23                 0.048   zinc finger protein 23 
ZNF323                0.048   zinc finger protein 323 
ZNF323                0.048   zinc finger protein 323 
ZNF323                0.048   zinc finger protein 323 
ZNF323                0.048   zinc finger protein 323 
ZNF681                0.048   zinc finger protein 681 
ZNF470                0.048   zinc finger protein 470 
ZNF91                 0.048   zinc finger protein 91 
ZNF35                 0.048   zinc finger protein 35 
ZNF471                0.048   zinc finger protein 471 
ZNF596                0.048   zinc finger protein 596 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press