DKC1 28556

Name: DKC1	Sequence: fasta or formatted (514aa)		NCBI GI: 4503337
Description: dyskerin isoform 1		Referenced in: Nucleus and Nucleolus Small RNAs in RNA Processing tRNA Enzymes
Other entries for this name: alt prot [509aa] dyskerin isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 39 2 C cysteine 1.6 8 1 D aspartate 4.9 25 1 E glutamate 8.4 43 2 F phenylalanine 1.0 5 1 G glycine 6.0 31 2 H histidine 2.5 13 1 I isoleucine 6.0 31 2 K lysine 12.1 62 8 L leucine 8.9 46 3 M methionine 2.3 12 1 N asparagine 1.8 9 1 P proline 4.5 23 2 Q glutamine 3.1 16 2 R arginine 5.8 30 2 S serine 5.8 30 2 T threonine 5.8 30 2 V valine 8.0 41 2 W tryptophan 1.2 6 1 Y tyrosine 2.7 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 dyskerin isoform 1 DKC1 0.982 dyskerin isoform 2 TRUB1 0.042 TruB pseudouridine (psi) synthase homolog 1 MAP1A 0.021 microtubule-associated protein 1A NOP58 0.020 NOP58 ribonucleoprotein homolog LOC100294088 0.019 PREDICTED: hypothetical protein, partial CYLC1 0.019 cylicin, basic protein of sperm head cytoskeleton 1... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform a ... CYLC2 0.018 cylicin 2 NSBP1 0.017 nucleosomal binding protein 1 DEK 0.017 DEK oncogene isoform 2 DEK 0.017 DEK oncogene isoform 1 CHD2 0.016 chromodomain helicase DNA binding protein 2 isoform... GTF2F1 0.015 general transcription factor IIF, polypeptide 1, 74... METAP2 0.015 methionyl aminopeptidase 2 FAM9A 0.015 family with sequence similarity 9, member A MAP1B 0.014 microtubule-associated protein 1B FAM133B 0.014 hypothetical protein LOC257415 isoform 2 FAM133B 0.014 hypothetical protein LOC257415 isoform 1 BRD9 0.013 bromodomain containing 9 isoform 1 NEFH 0.013 neurofilament, heavy polypeptide 200kDa SEC62 0.013 translocation protein 1 DNMT1 0.013 DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho... DNMT1 0.013 DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo... USP42 0.013 ubiquitin specific peptidase 42 RBMX2 0.013 RNA binding motif protein, X-linked 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.