TRUB1 12588

Name: TRUB1	Sequence: fasta or formatted (349aa)		NCBI GI: 21040257
Description: TruB pseudouridine (psi) synthase homolog 1		Referenced in: tRNA Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 38 4 C cysteine 1.4 5 1 D aspartate 4.0 14 2 E glutamate 7.7 27 2 F phenylalanine 2.3 8 2 G glycine 7.2 25 3 H histidine 1.1 4 1 I isoleucine 4.0 14 1 K lysine 8.6 30 2 L leucine 10.6 37 2 M methionine 2.0 7 1 N asparagine 1.4 5 1 P proline 5.4 19 2 Q glutamine 2.9 10 1 R arginine 4.0 14 1 S serine 9.2 32 2 T threonine 8.3 29 1 V valine 6.6 23 2 W tryptophan 0.6 2 1 Y tyrosine 1.7 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TruB pseudouridine (psi) synthase homolog 1 TRUB2 0.133 TruB pseudouridine (psi) synthase homolog 2 DKC1 0.064 dyskerin isoform 1 DKC1 0.064 dyskerin isoform 2 TRIP12 0.015 thyroid hormone receptor interactor 12 FAM48B1 0.012 hypothetical protein LOC100130302 KIAA0754 0.012 hypothetical protein LOC643314 C11orf30 0.012 EMSY protein RCOR1 0.011 REST corepressor 1 SP9 0.011 Sp9 transcription factor homolog LOC100290265 0.011 PREDICTED: hypothetical protein XP_002346787 DIP2A 0.011 disco-interacting protein 2A isoform f PRPF40A 0.011 formin binding protein 3 TTN 0.009 titin isoform N2-A TTN 0.009 titin isoform novex-2 TTN 0.009 titin isoform novex-1 TTN 0.009 titin isoform N2-B MED25 0.009 mediator complex subunit 25 AMOT 0.009 angiomotin isoform 2 AMOT 0.009 angiomotin isoform 1 BAT2D1 0.009 HBxAg transactivated protein 2 MAZ 0.008 MYC-associated zinc finger protein isoform 2 MAZ 0.008 MYC-associated zinc finger protein isoform 1 C2orf55 0.008 hypothetical protein LOC343990 TBX3 0.008 T-box 3 protein isoform 2 TBX3 0.008 T-box 3 protein isoform 1 ZMYM6 0.008 zinc finger protein 258 GAP43 0.008 growth associated protein 43 isoform 1 GAP43 0.008 growth associated protein 43 isoform 2 LOC342346 0.008 hypothetical protein LOC342346 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.