Guide to the Human Genome
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Name: ARAF Sequence: fasta or formatted (606aa) NCBI GI: 4502193
Description:

v-raf murine sarcoma 3611 viral oncogene homolog

Referenced in:

MAP Kinase Pathways
Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         39           2
 C cysteine            2.3         14           2
 D aspartate           5.0         30           2
 E glutamate           4.3         26           2
 F phenylalanine       4.3         26           2
 G glycine             6.6         40           2
 H histidine           3.3         20           2
 I isoleucine          3.6         22           2
 K lysine              5.0         30           3
 L leucine             9.1         55           2
 M methionine          2.6         16           1
 N asparagine          3.0         18           2
 P proline             7.1         43           2
 Q glutamine           5.3         32           2
 R arginine            6.9         42           2
 S serine              8.7         53           2
 T threonine           5.6         34           2
 V valine              7.3         44           2
 W tryptophan          1.0          6           1
 Y tyrosine            2.6         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   v-raf murine sarcoma 3611 viral oncogene homolog [Hom... 
RAF1                  0.577   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
BRAF                  0.540   B-Raf 
KSR1                  0.129   kinase suppressor of ras 
KSR2                  0.126   kinase suppressor of ras 2 
MAP3K12               0.099   mitogen-activated protein kinase kinase kinase 12 [H...
FYN                   0.099   protein-tyrosine kinase fyn isoform a 
FRK                   0.097   fyn-related kinase 
YES1                  0.092   viral oncogene yes-1 homolog 1 
EPHA4                 0.092   ephrin receptor EphA4 
MAP3K13               0.092   mitogen-activated protein kinase kinase kinase 13 [Ho...
SRC                   0.092   proto-oncogene tyrosine-protein kinase SRC 
SRC                   0.092   proto-oncogene tyrosine-protein kinase SRC 
FGR                   0.089   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.089   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.089   proto-oncogene tyrosine-protein kinase FGR 
FYN                   0.088   protein-tyrosine kinase fyn isoform b 
LYN                   0.088   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog ...
LYN                   0.088   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is...
EPHA3                 0.087   ephrin receptor EphA3 isoform a precursor 
LCK                   0.087   lymphocyte-specific protein tyrosine kinase precurs...
LCK                   0.087   lymphocyte-specific protein tyrosine kinase precurs...
MAP3K11               0.087   mitogen-activated protein kinase kinase kinase 11 [Ho...
EPHB3                 0.087   ephrin receptor EphB3 precursor 
HCK                   0.086   hemopoietic cell kinase isoform p61HCK 
MAP3K10               0.085   mitogen-activated protein kinase kinase kinase 10 [H...
BLK                   0.084   B lymphoid tyrosine kinase 
EPHA8                 0.084   ephrin receptor EphA8 isoform 1 precursor 
EPHB4                 0.084   EPH receptor B4 precursor 
EPHB1                 0.083   ephrin receptor EphB1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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