Guide to the Human Genome
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Name: EPHA3 Sequence: fasta or formatted (983aa) NCBI GI: 21361241
Description:

ephrin receptor EphA3 isoform a precursor

Referenced in:

Ephrins and Ephrin Receptors

Other entries for this name:
alt prot [539aa] ephrin receptor EphA3 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         52           3
 C cysteine            3.0         29           1
 D aspartate           5.8         57           3
 E glutamate           5.9         58           2
 F phenylalanine       3.7         36           1
 G glycine             6.2         61           2
 H histidine           1.7         17           1
 I isoleucine          6.6         65           2
 K lysine              6.1         60           2
 L leucine             7.4         73           4
 M methionine          2.3         23           1
 N asparagine          4.9         48           2
 P proline             5.4         53           3
 Q glutamine           3.4         33           1
 R arginine            5.0         49           2
 S serine              8.3         82           2
 T threonine           6.4         63           2
 V valine              7.4         73           2
 W tryptophan          1.6         16           1
 Y tyrosine            3.6         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ephrin receptor EphA3 isoform a precursor 
EPHA5                 0.697   ephrin receptor EphA5 isoform b precursor 
EPHA5                 0.691   ephrin receptor EphA5 isoform a precursor 
EPHA6                 0.637   EPH receptor A6 isoform a 
EPHA7                 0.635   ephrin receptor EphA7 
EPHA4                 0.634   ephrin receptor EphA4 
EPHA8                 0.576   ephrin receptor EphA8 isoform 1 precursor 
EPHB2                 0.554   ephrin receptor EphB2 isoform 1 precursor 
EPHB2                 0.553   ephrin receptor EphB2 isoform 2 precursor 
EPHB1                 0.549   ephrin receptor EphB1 precursor 
EPHA3                 0.546   ephrin receptor EphA3 isoform b precursor 
EPHB3                 0.542   ephrin receptor EphB3 precursor 
EPHA2                 0.477   ephrin receptor EphA2 
EPHB4                 0.453   EPH receptor B4 precursor 
EPHA10                0.452   EPH receptor A10 isofom 3 
EPHA1                 0.376   ephrin receptor EphA1 
EPHB6                 0.372   ephrin receptor EphB6 precursor 
EPHA8                 0.266   ephrin receptor EphA8 isoform 2 precursor 
EPHA10                0.151   EPH receptor A10 isoform 2 
IGF1R                 0.104   insulin-like growth factor 1 receptor precursor [Homo...
HCK                   0.102   hemopoietic cell kinase isoform p61HCK 
FYN                   0.100   protein-tyrosine kinase fyn isoform a 
LYN                   0.100   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog ...
LYN                   0.100   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is...
YES1                  0.099   viral oncogene yes-1 homolog 1 
PTK2                  0.099   PTK2 protein tyrosine kinase 2 isoform b 
PTK2                  0.099   PTK2 protein tyrosine kinase 2 isoform a 
SRC                   0.099   proto-oncogene tyrosine-protein kinase SRC 
SRC                   0.099   proto-oncogene tyrosine-protein kinase SRC 
FYN                   0.099   protein-tyrosine kinase fyn isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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