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Search of human proteins with 4501993
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4501993 alkyldihydroxyacetone phosphate synthase precursor
[Homo sapiens]
(658 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4501993 alkyldihydroxyacetone phosphate synthase precursor [H... 1341 0.0
gi|37595756 D-lactate dehydrogenase isoform 2 precursor [Homo sa... 97 5e-20
gi|37595754 D-lactate dehydrogenase isoform 1 precursor [Homo sa... 91 3e-18
gi|119964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo ... 75 1e-13
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 34 0.37
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens] 33 0.64
gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ... 33 0.64
gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ... 33 0.64
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens] 33 0.83
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens] 33 0.83
gi|5729929 matrix metalloproteinase 24 preproprotein [Homo sapiens] 32 1.4
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa... 31 4.1
gi|7661892 REST corepressor 1 [Homo sapiens] 30 7.1
gi|239754420 PREDICTED: hypothetical protein [Homo sapiens] 30 7.1
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 30 7.1
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 30 7.1
gi|239742965 PREDICTED: hypothetical protein XP_002342706 [Homo ... 30 7.1
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 30 7.1
gi|116734702 homeobox D13 [Homo sapiens] 30 9.2
gi|62865604 tripartite motif protein 31 [Homo sapiens] 30 9.2
gi|29029595 glutamate receptor KA1 precursor [Homo sapiens] 30 9.2
gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens] 30 9.2
gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens] 30 9.2
gi|170784831 chromosome 1 open reading frame 9 protein isoform 2... 30 9.2
gi|7656940 chromosome 1 open reading frame 9 protein isoform 1 [... 30 9.2
gi|31542255 hypothetical protein LOC140706 [Homo sapiens] 30 9.2
gi|24497464 Shaw-related voltage-gated potassium channel protein... 30 9.2
>gi|4501993 alkyldihydroxyacetone phosphate synthase precursor [Homo
sapiens]
Length = 658
Score = 1341 bits (3471), Expect = 0.0
Identities = 658/658 (100%), Positives = 658/658 (100%)
Query: 1 MAEAAAAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKA 60
MAEAAAAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKA
Sbjct: 1 MAEAAAAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKA 60
Query: 61 RRAASAATAAPTATPAAQESGTIPKKRQEVMKWNGWGYNDSKFIFNKKGQIELTGKRYPL 120
RRAASAATAAPTATPAAQESGTIPKKRQEVMKWNGWGYNDSKFIFNKKGQIELTGKRYPL
Sbjct: 61 RRAASAATAAPTATPAAQESGTIPKKRQEVMKWNGWGYNDSKFIFNKKGQIELTGKRYPL 120
Query: 121 SGMGLPTFKEWIQNTLGVNVEHKTTSKASLNPSDTPPSVVNEDFLHDLKETNISYSQEAD 180
SGMGLPTFKEWIQNTLGVNVEHKTTSKASLNPSDTPPSVVNEDFLHDLKETNISYSQEAD
Sbjct: 121 SGMGLPTFKEWIQNTLGVNVEHKTTSKASLNPSDTPPSVVNEDFLHDLKETNISYSQEAD 180
Query: 181 DRVFRAHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTS 240
DRVFRAHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTS
Sbjct: 181 DRVFRAHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTS 240
Query: 241 VSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGH 300
VSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGH
Sbjct: 241 VSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGH 300
Query: 301 EPDSLEFSTVGGWVSTRASGMKKNIYGNIEDLVVHIKMVTPRGIIEKSCQGPRMSTGPDI 360
EPDSLEFSTVGGWVSTRASGMKKNIYGNIEDLVVHIKMVTPRGIIEKSCQGPRMSTGPDI
Sbjct: 301 EPDSLEFSTVGGWVSTRASGMKKNIYGNIEDLVVHIKMVTPRGIIEKSCQGPRMSTGPDI 360
Query: 361 HHFIMGSEGTLGVITEATIKIRPVPEYQKYGSVAFPNFEQGVACLREIAKQRCAPASIRL 420
HHFIMGSEGTLGVITEATIKIRPVPEYQKYGSVAFPNFEQGVACLREIAKQRCAPASIRL
Sbjct: 361 HHFIMGSEGTLGVITEATIKIRPVPEYQKYGSVAFPNFEQGVACLREIAKQRCAPASIRL 420
Query: 421 MDNKQFQFGHALKPQVSSIFTSFLDGLKKFYITKFKGFDPNQLSVATLLFEGDREKVLQH 480
MDNKQFQFGHALKPQVSSIFTSFLDGLKKFYITKFKGFDPNQLSVATLLFEGDREKVLQH
Sbjct: 421 MDNKQFQFGHALKPQVSSIFTSFLDGLKKFYITKFKGFDPNQLSVATLLFEGDREKVLQH 480
Query: 481 EKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGESFETSAPWDRVVDL 540
EKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGESFETSAPWDRVVDL
Sbjct: 481 EKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGESFETSAPWDRVVDL 540
Query: 541 CRNVKERITRECKEKGVQFAPFSTCRVTQTYDAGACIYFYFAFNYRGISDPLTVFEQTEA 600
CRNVKERITRECKEKGVQFAPFSTCRVTQTYDAGACIYFYFAFNYRGISDPLTVFEQTEA
Sbjct: 541 CRNVKERITRECKEKGVQFAPFSTCRVTQTYDAGACIYFYFAFNYRGISDPLTVFEQTEA 600
Query: 601 AAREEILANGGSLSHHHGVGKLRKQWLKESISDVGFGMLKSVKEYVDPNNIFGNRNLL 658
AAREEILANGGSLSHHHGVGKLRKQWLKESISDVGFGMLKSVKEYVDPNNIFGNRNLL
Sbjct: 601 AAREEILANGGSLSHHHGVGKLRKQWLKESISDVGFGMLKSVKEYVDPNNIFGNRNLL 658
>gi|37595756 D-lactate dehydrogenase isoform 2 precursor [Homo
sapiens]
Length = 484
Score = 97.1 bits (240), Expect = 5e-20
Identities = 103/461 (22%), Positives = 193/461 (41%), Gaps = 50/461 (10%)
Query: 206 PDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNR 265
PD V+WP + V ++ L + + IIP G GT + G+ + + ++ + M+R
Sbjct: 66 PDAVVWPQNVEQVSRLAALCYRQGVPIIPFGTGTGLEGGVCA----VQGGVCVNLTHMDR 121
Query: 266 ILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWVSTRASGMKKNI 325
IL +++ + + VE G+T + L L++SG +P + +++ G +T ASG
Sbjct: 122 ILELNQEDFSVVVEPGVTRKALNAHLRDSGLWFPVDPGA--DASLCGMAATGASGTNAVR 179
Query: 326 YGNIEDLVVHIKMVTPRG-IIEKSCQGP---RMSTGPDIHHFIMGSEGTLGVITEATIKI 381
YG + D V+++++V P G ++ + +G + + G ++ +GSEGTLG+IT T+++
Sbjct: 180 YGTMRDNVLNLEVVLPDGRLLHTAGRGRHFRKSAAGYNLTGLFVGSEGTLGLITATTLRL 239
Query: 382 RPVPEYQKYGSVAFPNFEQGVACLREIAKQRCAPASIRLMDNKQFQFGHALKPQVSSIFT 441
P PE + AFP+ + V H L+ V
Sbjct: 240 HPAPEATVAATCAFPSVQAAVDSTV-----------------------HILQAAVPVARI 276
Query: 442 SFLDGLKKFYITKFKGFDPNQLSVATLLFEGDREKVLQHEKQVYDIAAKFGG--LAAGED 499
FLD + ++ + L F G ++ + + ++ +I + G + ++
Sbjct: 277 EFLDEVMMDACNRYSKLNCLVAPTLFLEFHGSQQALEEQLQRTEEIVQQNGASDFSWAKE 336
Query: 500 NGQRGYLLTYVI-AYIRDLALEYYVLGESFETSAPWDRVVDLCRNVKERITRECKEKGVQ 558
+R L T A+ LA G S + P R+ ++ KE + +
Sbjct: 337 AEERSRLWTARHNAWYAALATRPGCKGYSTDVCVPISRLPEIVVQTKEDLNASGLTGSI- 395
Query: 559 FAPFSTCRVTQTYDAGA-CIYFYFAFNYRGISDPLTVFEQTEAAAREEILANGGSLSHHH 617
V D CI + + EQ A LA G+ + H
Sbjct: 396 --------VGHVGDGNFHCILLVNPDDAEELGRVKAFAEQLGRRA----LALHGTCTGEH 443
Query: 618 GVGKLRKQWLKESISDVGFGMLKSVKEYVDPNNIFGNRNLL 658
G+G ++Q L+E + VG ++ +K +DP + +L
Sbjct: 444 GIGMGKRQLLQEEVGAVGVETMRQLKAVLDPQGLMNPGKVL 484
>gi|37595754 D-lactate dehydrogenase isoform 1 precursor [Homo
sapiens]
Length = 507
Score = 90.9 bits (224), Expect = 3e-18
Identities = 106/484 (21%), Positives = 193/484 (39%), Gaps = 73/484 (15%)
Query: 206 PDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNR 265
PD V+WP + V ++ L + + IIP G GT + G+ + + ++ + M+R
Sbjct: 66 PDAVVWPQNVEQVSRLAALCYRQGVPIIPFGTGTGLEGGVCA----VQGGVCVNLTHMDR 121
Query: 266 ILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWVSTRASGMKKNI 325
IL +++ + + VE G+T + L L++SG +P + +++ G +T ASG
Sbjct: 122 ILELNQEDFSVVVEPGVTRKALNAHLRDSGLWFPVDPGA--DASLCGMAATGASGTNAVR 179
Query: 326 YGNIEDLVVHIKMVTPRG-IIEKSCQGPRMSTG--PDIHH-------------------- 362
YG + D V+++++V P G ++ + +G G P+I H
Sbjct: 180 YGTMRDNVLNLEVVLPDGRLLHTAGRGRHFRFGFWPEIPHHTAWYSPCVSLGRRKSAAGY 239
Query: 363 ----FIMGSEGTLGVITEATIKIRPVPEYQKYGSVAFPNFEQGVACLREIAKQRCAPASI 418
+GSEGTLG+IT T+++ P PE + AFP+ + V
Sbjct: 240 NLTGLFVGSEGTLGLITATTLRLHPAPEATVAATCAFPSVQAAVDSTV------------ 287
Query: 419 RLMDNKQFQFGHALKPQVSSIFTSFLDGLKKFYITKFKGFDPNQLSVATLLFEGDREKVL 478
H L+ V FLD + ++ + L F G ++ +
Sbjct: 288 -----------HILQAAVPVARIEFLDEVMMDACNRYSKLNCLVAPTLFLEFHGSQQALE 336
Query: 479 QHEKQVYDIAAKFGG--LAAGEDNGQRGYLLTYVI-AYIRDLALEYYVLGESFETSAPWD 535
+ ++ +I + G + ++ +R L T A+ LA G S + P
Sbjct: 337 EQLQRTEEIVQQNGASDFSWAKEAEERSRLWTARHNAWYAALATRPGCKGYSTDVCVPIS 396
Query: 536 RVVDLCRNVKERITRECKEKGVQFAPFSTCRVTQTYDAGA-CIYFYFAFNYRGISDPLTV 594
R+ ++ KE + + V D CI + +
Sbjct: 397 RLPEIVVQTKEDLNASGLTGSI---------VGHVGDGNFHCILLVNPDDAEELGRVKAF 447
Query: 595 FEQTEAAAREEILANGGSLSHHHGVGKLRKQWLKESISDVGFGMLKSVKEYVDPNNIFGN 654
EQ A LA G+ + HG+G ++Q L+E + VG ++ +K +DP +
Sbjct: 448 AEQLGRRA----LALHGTCTGEHGIGMGKRQLLQEEVGAVGVETMRQLKAVLDPQGLMNP 503
Query: 655 RNLL 658
+L
Sbjct: 504 GKVL 507
>gi|119964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo
sapiens]
Length = 521
Score = 75.5 bits (184), Expect = 1e-13
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 208 IVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRIL 267
++L P ++V I+ + NL + P GG T + G + DE I L T++MNR+L
Sbjct: 102 VLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSVPVFDE----IILSTARMNRVL 157
Query: 268 WVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWVSTRASGMKKNIYG 327
+ +AG +EL R ++E + + + +GG V+T A G++ YG
Sbjct: 158 SFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYG 217
Query: 328 NIEDLVVHIKMVTPRGIIEKSCQGPRM-STGPDIHHFIMGSEGTLGVITEATIKIRPVPE 386
++ V+ +++V G + R +TG D+ +GSEGTLG+IT +I P P
Sbjct: 218 SLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKPR 277
Query: 387 YQKYGSVAFPNFEQ 400
+ P F +
Sbjct: 278 AVNVAFLGCPGFAE 291
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 34.3 bits (77), Expect = 0.37
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 8 AGGTGLGAGASYGSAAD----RDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKARRA 63
AGGTG G+ +AD +DR+ + + RR +G G + T +R
Sbjct: 221 AGGTGQRRGSRSSPSADQQRAQDREEEAAQPQRRPAGGTGQRRGTAAAPVPTTGGTGQRR 280
Query: 64 ASAATAAPTATPAAQESGT 82
+AA APT+T Q G+
Sbjct: 281 GTAAAPAPTSTGTGQRRGS 299
>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 33.5 bits (75), Expect = 0.64
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 22/105 (20%)
Query: 6 AAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSG-HLLG----------------- 47
A AGG+ L G ++ ++ R P P+R RR R G H G
Sbjct: 44 APAGGSPLAVGGAFRVSSPRPFPPRPERPSRRHRAGCGAHGPGSRGRERRRGSRDPPAGP 103
Query: 48 ----RPREALSTNECKARRAASAATAAPTATPAAQESGTIPKKRQ 88
R R + + A+ AAP A P A + T+P R+
Sbjct: 104 VARARARGRSAPGSAQPASGAAGPAAAPEAAPPAWDPATLPPSRK 148
>gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo
sapiens]
Length = 315
Score = 33.5 bits (75), Expect = 0.64
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 22/105 (20%)
Query: 6 AAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSG-HLLG----------------- 47
A AGG+ L G ++ ++ R P P+R RR R G H G
Sbjct: 44 APAGGSPLAVGGAFRVSSPRPFPPRPERPSRRHRAGCGAHGPGSRGRERRRGSRDPPAGP 103
Query: 48 ----RPREALSTNECKARRAASAATAAPTATPAAQESGTIPKKRQ 88
R R + + A+ AAP A P A + T+P R+
Sbjct: 104 VARARARGRSAPGSAQPASGAAGPAAAPEAAPPAWDPATLPPSRK 148
>gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo
sapiens]
Length = 315
Score = 33.5 bits (75), Expect = 0.64
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 22/105 (20%)
Query: 6 AAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSG-HLLG----------------- 47
A AGG+ L G ++ ++ R P P+R RR R G H G
Sbjct: 44 APAGGSPLAVGGAFRVSSPRPFPPRPERPSRRHRAGCGAHGPGSRGRERRRGSRDPPAGP 103
Query: 48 ----RPREALSTNECKARRAASAATAAPTATPAAQESGTIPKKRQ 88
R R + + A+ AAP A P A + T+P R+
Sbjct: 104 VARARARGRSAPGSAQPASGAAGPAAAPEAAPPAWDPATLPPSRK 148
>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
Length = 694
Score = 33.1 bits (74), Expect = 0.83
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 121 SGMGLPTFKEWIQNTLGVNVEHKT-TSKASLNPSDTPPSVVNEDFLHDLKETNIS 174
+G P K W++ +G +HKT K +LNP NE+F +D+K ++++
Sbjct: 583 NGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPE------FNEEFFYDIKHSDLA 631
>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
Length = 690
Score = 33.1 bits (74), Expect = 0.83
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 121 SGMGLPTFKEWIQNTLGVNVEHKT-TSKASLNPSDTPPSVVNEDFLHDLKETNIS 174
+G P K W++ +G +HKT K +LNP NE+F +D+K ++++
Sbjct: 579 NGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPE------FNEEFFYDIKHSDLA 627
>gi|5729929 matrix metalloproteinase 24 preproprotein [Homo sapiens]
Length = 645
Score = 32.3 bits (72), Expect = 1.4
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 29/196 (14%)
Query: 4 AAAAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKARRA 63
A AAA G G A+ A R + + AG+ G+LL A + + KA ++
Sbjct: 50 ARAAAAAAGAGNRAAVAVAVARADEAEAPFAGQNWLKSYGYLLPYDSRASALHSAKALQS 109
Query: 64 ASAATAAPTATPAAQESGTIPKKRQEVMKWNGWGYNDSKFIFNKKGQIELTGKRYPLSGM 123
A + P +G + + E MK G D + ++ KRY L+G
Sbjct: 110 AVSTMQQFYGIPV---TGVLDQTTIEWMKKPRCGVPDHPHLSRRR-----RNKRYALTG- 160
Query: 124 GLPTFKEWIQNTLGVNVEHKT-------TSKASLNPSD----TPPSVVNEDFLHDLKETN 172
++W Q + ++ + T T KA D P E H++K
Sbjct: 161 -----QKWRQKHITYSIHNYTPKVGELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIK--- 212
Query: 173 ISYSQEADDRVFRAHG 188
S +EAD +F A G
Sbjct: 213 -SDRKEADIMIFFASG 227
>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
sapiens]
Length = 2715
Score = 30.8 bits (68), Expect = 4.1
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 48 RPREALSTNECKARRAASAATAAPTATPAAQESGTIPKKRQE 89
+PREA T E K +R+ + + A + A++E G P ++++
Sbjct: 156 KPREASGTKEAKEKRSCTDSAARTKSRKASKEQGPTPVEKKK 197
>gi|7661892 REST corepressor 1 [Homo sapiens]
Length = 482
Score = 30.0 bits (66), Expect = 7.1
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 41 LSGHLLGRPREALSTNECKARRAASAATAAPTATPAA 77
+SG GR A S + A AASAA A+P AT A+
Sbjct: 8 VSGKRRGRNNAAASASAAAASAAASAACASPAATAAS 44
>gi|239754420 PREDICTED: hypothetical protein [Homo sapiens]
Length = 105
Score = 30.0 bits (66), Expect = 7.1
Identities = 28/82 (34%), Positives = 33/82 (40%), Gaps = 25/82 (30%)
Query: 3 EAAAAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKARR 62
EA AA T G ++ +A P+P AGR+LR PRE LST
Sbjct: 26 EARAAQEPTERGEAQAWRAAG-----PEPCPAGRQLR---------PREKLST------- 64
Query: 63 AASAATAAPTATPAAQESGTIP 84
A A P ATP G P
Sbjct: 65 ----AAAGPGATPLTARGGGAP 82
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 30.0 bits (66), Expect = 7.1
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 22 AADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKARRAASAATAAPTATPAAQESG 81
A R+R G LR + GR + A +T SAATAAP TPA+ G
Sbjct: 64 APPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGN---SAATAAPHPTPASYPQG 120
Query: 82 TI 83
TI
Sbjct: 121 TI 122
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 30.0 bits (66), Expect = 7.1
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 22 AADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKARRAASAATAAPTATPAAQESG 81
A R+R G LR + GR + A +T SAATAAP TPA+ G
Sbjct: 64 APPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGN---SAATAAPHPTPASYPQG 120
Query: 82 TI 83
TI
Sbjct: 121 TI 122
>gi|239742965 PREDICTED: hypothetical protein XP_002342706 [Homo
sapiens]
Length = 105
Score = 30.0 bits (66), Expect = 7.1
Identities = 28/82 (34%), Positives = 33/82 (40%), Gaps = 25/82 (30%)
Query: 3 EAAAAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKARR 62
EA AA T G ++ +A P+P AGR+LR PRE LST
Sbjct: 26 EARAAQEPTERGEAQAWRAAG-----PEPCPAGRQLR---------PREKLST------- 64
Query: 63 AASAATAAPTATPAAQESGTIP 84
A A P ATP G P
Sbjct: 65 ----AAAGPGATPLTARGGGAP 82
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 30.0 bits (66), Expect = 7.1
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 22 AADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKARRAASAATAAPTATPAAQESG 81
A R+R G LR + GR + A +T SAATAAP TPA+ G
Sbjct: 64 APPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGN---SAATAAPHPTPASYPQG 120
Query: 82 TI 83
TI
Sbjct: 121 TI 122
>gi|116734702 homeobox D13 [Homo sapiens]
Length = 343
Score = 29.6 bits (65), Expect = 9.2
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 2 AEAAAAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKAR 61
A AAAAA +G +Y ++R + S + RP EA EC A
Sbjct: 59 AAAAAAAAAAAAASGFAYPGTSERTGSSSSSSS-------SAVVAARP-EAPPAKECPAP 110
Query: 62 RAASAATAAPTA 73
A+AA A P+A
Sbjct: 111 TPAAAAAAPPSA 122
>gi|62865604 tripartite motif protein 31 [Homo sapiens]
Length = 425
Score = 29.6 bits (65), Expect = 9.2
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 197 LREGMF-ERIPDIVLWPTCHDDVVKIVNLACKYNLCI--IPIGGGTSVSYGLMCPADETR 253
+ G F ++ + V+ P C D + K V + C +N C+ I G TS + CP +
Sbjct: 1 MASGQFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGF-FKCPL--CK 57
Query: 254 TIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHE 301
T + + + N +L NL ++A + E++ + KE+ C H+
Sbjct: 58 TSVRKNAIRFNSLL----RNLVEKIQA-LQASEVQSKRKEA-TCPRHQ 99
>gi|29029595 glutamate receptor KA1 precursor [Homo sapiens]
Length = 956
Score = 29.6 bits (65), Expect = 9.2
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 260 TSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWVSTRAS 319
TS MN + V+ LT H+E GQ LK + F +G W
Sbjct: 345 TSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQFTRN------GFRQIGQWHVAEGL 398
Query: 320 GMKKNIY-GNIEDLVVHIKMV 339
M ++Y NI D + + +V
Sbjct: 399 SMDSHLYASNISDTLFNTTLV 419
>gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]
Length = 516
Score = 29.6 bits (65), Expect = 9.2
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 21/78 (26%)
Query: 6 AAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKA----R 61
A AGG GL AG YG A + P P A AL+T E A
Sbjct: 236 ACAGGPGLPAGELYGWAVETTPSPGPQPA-----------------ALTTGEAAAPESPH 278
Query: 62 RAASAATAAPTATPAAQE 79
+A + +P+A A QE
Sbjct: 279 QAEPYLSPSPSACTAVQE 296
>gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]
Length = 503
Score = 29.6 bits (65), Expect = 9.2
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 21/78 (26%)
Query: 6 AAAGGTGLGAGASYGSAADRDRDPDPDRAGRRLRVLSGHLLGRPREALSTNECKA----R 61
A AGG GL AG YG A + P P A AL+T E A
Sbjct: 223 ACAGGPGLPAGELYGWAVETTPSPGPQPA-----------------ALTTGEAAAPESPH 265
Query: 62 RAASAATAAPTATPAAQE 79
+A + +P+A A QE
Sbjct: 266 QAEPYLSPSPSACTAVQE 283
>gi|170784831 chromosome 1 open reading frame 9 protein isoform 2
[Homo sapiens]
Length = 1210
Score = 29.6 bits (65), Expect = 9.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 105 FNKKGQIELTGKRYPLSGMGLPTFKEWIQNTLGVNVEHKTTSKASLN 151
+ K G I+ T P +PTF EW + + V E + AS N
Sbjct: 211 YTKPGDIDPTSVASPKDPEDIPTFDEWKKKVMEVEKEKSQSMHASSN 257
>gi|7656940 chromosome 1 open reading frame 9 protein isoform 1
[Homo sapiens]
Length = 1254
Score = 29.6 bits (65), Expect = 9.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 105 FNKKGQIELTGKRYPLSGMGLPTFKEWIQNTLGVNVEHKTTSKASLN 151
+ K G I+ T P +PTF EW + + V E + AS N
Sbjct: 248 YTKPGDIDPTSVASPKDPEDIPTFDEWKKKVMEVEKEKSQSMHASSN 294
>gi|31542255 hypothetical protein LOC140706 [Homo sapiens]
Length = 433
Score = 29.6 bits (65), Expect = 9.2
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 142 HKTTSKASLNPSDTPPSVVNEDFLHDLKETNISYSQEADDRVFRAHGHCLHEIFLLREGM 201
H T +SLNPS + D LKE + + E D + CL + E +
Sbjct: 70 HLTWVTSSLNPSSRDELLQLLDTARQLKELPLKTTAE-QDSILSLSARCLLLTWRDNEEL 128
Query: 202 FERIP--DIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYG 244
RIP +I DD + + L K L + P+ G S G
Sbjct: 129 ILRIPTHEIAAASYLQDDALHL--LVLKTGLGVDPVPAGVDASPG 171
>gi|24497464 Shaw-related voltage-gated potassium channel protein 4
isoform b [Homo sapiens]
Length = 582
Score = 29.6 bits (65), Expect = 9.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 48 RPREALSTNECKARRAASAATAAPTATPAAQESGTIPKKRQ-EVMKWNG 95
RP + S CK+ + + +P A+E G I +KR E+ W G
Sbjct: 498 RPAQLESPMYCKSEETSPRDSTCSDTSPPAREEGMIERKRAGEIRGWEG 546
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,296,210
Number of Sequences: 37866
Number of extensions: 1153841
Number of successful extensions: 3617
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3591
Number of HSP's gapped (non-prelim): 32
length of query: 658
length of database: 18,247,518
effective HSP length: 109
effective length of query: 549
effective length of database: 14,120,124
effective search space: 7751948076
effective search space used: 7751948076
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.