C20orf160 25476

Name: C20orf160	Sequence: fasta or formatted (433aa)		NCBI GI: 31542255
Description: hypothetical protein LOC140706		Referenced in: Additional Brain Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 43 4 C cysteine 3.5 15 3 D aspartate 4.4 19 2 E glutamate 5.1 22 2 F phenylalanine 1.2 5 1 G glycine 11.8 51 8 H histidine 2.3 10 1 I isoleucine 3.7 16 2 K lysine 3.0 13 2 L leucine 9.5 41 3 M methionine 1.2 5 1 N asparagine 1.2 5 1 P proline 7.4 32 2 Q glutamine 3.0 13 1 R arginine 9.5 41 2 S serine 9.0 39 3 T threonine 4.8 21 2 V valine 4.2 18 1 W tryptophan 3.2 14 1 Y tyrosine 2.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC140706 CCM2 0.137 cerebral cavernous malformation 2 isoform 2 CCM2 0.127 cerebral cavernous malformation 2 isoform 1 FAM98B 0.033 family with sequence similarity 98, member B isofor... HNRNPL 0.028 heterogeneous nuclear ribonucleoprotein L isoform a ... FUS 0.026 fusion (involved in t(12;16) in malignant liposarcoma... KRT1 0.025 keratin 1 KRT2 0.025 keratin 2 C6orf174 0.024 hypothetical protein LOC387104 HNRNPA0 0.024 heterogeneous nuclear ribonucleoprotein A0 KRT9 0.024 keratin 9 PCDH7 0.024 protocadherin 7 isoform c precursor HNRNPUL1 0.023 heterogeneous nuclear ribonucleoprotein U-like 1 iso... HNRNPUL1 0.023 heterogeneous nuclear ribonucleoprotein U-like 1 iso... EN1 0.023 engrailed homeobox 1 PPP1R10 0.023 protein phosphatase 1, regulatory subunit 10 LOC728767 0.023 PREDICTED: hypothetical protein LOC728767 0.023 PREDICTED: hypothetical protein KRT10 0.022 keratin 10 FOXC1 0.022 forkhead box C1 AVEN 0.020 cell death regulator aven HOXB3 0.020 homeobox B3 CCDC85A 0.020 coiled-coil domain containing 85A ALK 0.020 anaplastic lymphoma kinase LOC100287115 0.020 PREDICTED: hypothetical protein LOC100287115 0.020 PREDICTED: hypothetical protein XP_002343389 PCDH7 0.020 protocadherin 7 isoform b precursor PCDH7 0.020 protocadherin 7 isoform a precursor LTK 0.020 leukocyte receptor tyrosine kinase isoform 1 precurs... LOR 0.019 loricrin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.