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Search of human proteins with 44955926
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|44955926 genetic suppressor element 1 isoform 1 [Homo
sapiens]
(1217 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 2443 0.0
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 2246 0.0
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 96 3e-19
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 93 2e-18
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 90 1e-17
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 86 2e-16
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 81 5e-15
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 79 3e-14
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 79 3e-14
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 77 8e-14
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 77 8e-14
gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens] 77 1e-13
gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens] 77 1e-13
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 77 1e-13
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 75 3e-13
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 75 3e-13
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 75 3e-13
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 74 6e-13
gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens] 74 6e-13
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 74 8e-13
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 73 2e-12
gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] 72 3e-12
gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo ... 71 5e-12
gi|125988409 RED protein [Homo sapiens] 71 7e-12
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 70 1e-11
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 70 1e-11
gi|34878777 ring finger protein 20 [Homo sapiens] 70 1e-11
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 70 1e-11
gi|14670268 RD RNA-binding protein [Homo sapiens] 69 3e-11
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 68 5e-11
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 2443 bits (6332), Expect = 0.0
Identities = 1217/1217 (100%), Positives = 1217/1217 (100%)
Query: 1 MKGMSHEPKSPSLGMLSTATRTTATVNPLTPSPLNGALVPSGSPATSSALSAQAAPSSSF 60
MKGMSHEPKSPSLGMLSTATRTTATVNPLTPSPLNGALVPSGSPATSSALSAQAAPSSSF
Sbjct: 1 MKGMSHEPKSPSLGMLSTATRTTATVNPLTPSPLNGALVPSGSPATSSALSAQAAPSSSF 60
Query: 61 AAALRKLAKQAEEPRGSSLSSESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPST 120
AAALRKLAKQAEEPRGSSLSSESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPST
Sbjct: 61 AAALRKLAKQAEEPRGSSLSSESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPST 120
Query: 121 PPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGPAIPSHLLSTP 180
PPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGPAIPSHLLSTP
Sbjct: 121 PPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGPAIPSHLLSTP 180
Query: 181 YPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRPYHTTDDLRMSSLPPLG 240
YPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRPYHTTDDLRMSSLPPLG
Sbjct: 181 YPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRPYHTTDDLRMSSLPPLG 240
Query: 241 LDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSLPPLHPSAMHLH 300
LDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSLPPLHPSAMHLH
Sbjct: 241 LDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSLPPLHPSAMHLH 300
Query: 301 LSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKE 360
LSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKE
Sbjct: 301 LSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKE 360
Query: 361 REREREKEREQEKEREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGH 420
REREREKEREQEKEREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGH
Sbjct: 361 REREREKEREQEKEREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGH 420
Query: 421 ATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSS 480
ATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSS
Sbjct: 421 ATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSS 480
Query: 481 SAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEH 540
SAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEH
Sbjct: 481 SAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEH 540
Query: 541 RPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTALWNPVSLMDNTLETRRA 600
RPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTALWNPVSLMDNTLETRRA
Sbjct: 541 RPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTALWNPVSLMDNTLETRRA 600
Query: 601 ESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPPPPREGG 660
ESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPPPPREGG
Sbjct: 601 ESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPPPPREGG 660
Query: 661 SLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSGPLKPGSPYRPPVPRAP 720
SLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSGPLKPGSPYRPPVPRAP
Sbjct: 661 SLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSGPLKPGSPYRPPVPRAP 720
Query: 721 DPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAE 780
DPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAE
Sbjct: 721 DPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAE 780
Query: 781 QPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPS 840
QPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPS
Sbjct: 781 QPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPS 840
Query: 841 PRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKERLVEMLRAMKQKALSA 900
PRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKERLVEMLRAMKQKALSA
Sbjct: 841 PRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKERLVEMLRAMKQKALSA 900
Query: 901 AVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIPKAAEPGKLEQVRPQEL 960
AVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIPKAAEPGKLEQVRPQEL
Sbjct: 901 AVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIPKAAEPGKLEQVRPQEL 960
Query: 961 SRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPLSHSTNGKSKPWEPFVA 1020
SRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPLSHSTNGKSKPWEPFVA
Sbjct: 961 SRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPLSHSTNGKSKPWEPFVA 1020
Query: 1021 EEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYNIPELQSSSRAPPPQHN 1080
EEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYNIPELQSSSRAPPPQHN
Sbjct: 1021 EEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYNIPELQSSSRAPPPQHN 1080
Query: 1081 GQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQ 1140
GQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQ
Sbjct: 1081 GQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQ 1140
Query: 1141 NLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERERLQAELDHLRKCL 1200
NLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERERLQAELDHLRKCL
Sbjct: 1141 NLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERERLQAELDHLRKCL 1200
Query: 1201 ALPAMHWPRGYLKGYPR 1217
ALPAMHWPRGYLKGYPR
Sbjct: 1201 ALPAMHWPRGYLKGYPR 1217
>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
Length = 1113
Score = 2246 bits (5821), Expect = 0.0
Identities = 1113/1113 (100%), Positives = 1113/1113 (100%)
Query: 105 MGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQ 164
MGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQ
Sbjct: 1 MGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQ 60
Query: 165 EKAGGPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRP 224
EKAGGPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRP
Sbjct: 61 EKAGGPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRP 120
Query: 225 YHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIP 284
YHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIP
Sbjct: 121 YHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIP 180
Query: 285 TPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERE 344
TPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERE
Sbjct: 181 TPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERE 240
Query: 345 REREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLAAKAL 404
REREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLAAKAL
Sbjct: 241 REREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLAAKAL 300
Query: 405 EPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHT 464
EPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHT
Sbjct: 301 EPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHT 360
Query: 465 VPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLE 524
VPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLE
Sbjct: 361 VPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLE 420
Query: 525 QHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTAL 584
QHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTAL
Sbjct: 421 QHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTAL 480
Query: 585 WNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPA 644
WNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPA
Sbjct: 481 WNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPA 540
Query: 645 PLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSG 704
PLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSG
Sbjct: 541 PLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSG 600
Query: 705 PLKPGSPYRPPVPRAPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYD 764
PLKPGSPYRPPVPRAPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYD
Sbjct: 601 PLKPGSPYRPPVPRAPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYD 660
Query: 765 ESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRE 824
ESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRE
Sbjct: 661 ESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRE 720
Query: 825 RSPSPPTIQSKRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKE 884
RSPSPPTIQSKRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKE
Sbjct: 721 RSPSPPTIQSKRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKE 780
Query: 885 RLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP 944
RLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP
Sbjct: 781 RLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP 840
Query: 945 KAAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPL 1004
KAAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPL
Sbjct: 841 KAAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPL 900
Query: 1005 SHSTNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYN 1064
SHSTNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYN
Sbjct: 901 SHSTNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYN 960
Query: 1065 IPELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQ 1124
IPELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQ
Sbjct: 961 IPELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQ 1020
Query: 1125 GIEAVFEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVS 1184
GIEAVFEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVS
Sbjct: 1021 GIEAVFEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVS 1080
Query: 1185 ERERLQAELDHLRKCLALPAMHWPRGYLKGYPR 1217
ERERLQAELDHLRKCLALPAMHWPRGYLKGYPR
Sbjct: 1081 ERERLQAELDHLRKCLALPAMHWPRGYLKGYPR 1113
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 95.5 bits (236), Expect = 3e-19
Identities = 100/365 (27%), Positives = 162/365 (44%), Gaps = 58/365 (15%)
Query: 321 ERMSGLSAERLQMDEELR-REREREREREREREADREREKEREREREKEREQEKEREREK 379
ER S + +R + E+ R RERERERERERERE +RERE+ERERERE+ERE+E+E+++++
Sbjct: 372 ERSSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKR 431
Query: 380 ERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEK 439
+RE + E E+R E++L +A L E+ + T E K +E+ R E
Sbjct: 432 DREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERK--KTREYEKEAEREEERRREM 489
Query: 440 LKDAGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLA 499
K+A K ++ L P +AL + + E++ A
Sbjct: 490 AKEA-----KRLKEFLEDYDDDRDD-------------PKYYRGSALQKRLRDREKEMEA 531
Query: 500 RQRRLRQEKED----RQSQVSE------FRQQVLEQHLDMGRPP---VPAEAEHRPESTT 546
+R ++EKE+ RQ ++E Q +EQ + R P E+E E
Sbjct: 532 DERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQ 591
Query: 547 RPGPNRHEP-GGRDPPQHFGGPPPLISPKPQLHAAPTALWN----------PVSLM---D 592
R EP + P+ P + P + +A N P ++ +
Sbjct: 592 EKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSASGNATPNTPGDESPCGIIIPHE 651
Query: 593 NTLETRRAESH----------SLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKRE 642
N+ + ++ E H + P ++ +P+ V F E +++ PRKR+
Sbjct: 652 NSPDQQQPEEHRPKIGLSLKLGASNSPGQPNSVKRKKLPVDSVFNKFEDEDSDDVPRKRK 711
Query: 643 PAPLD 647
PLD
Sbjct: 712 LVPLD 716
Score = 84.3 bits (207), Expect = 6e-16
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
E G + Q E+ RRERERERERERER +RERE+EREREREKE+E+E+ERER+++
Sbjct: 292 EEEKGKKEKERQEIEKERRERERERERERERR-EREREREREREREKEKERERERERDRD 350
Query: 381 RERELERQREQRAREKE 397
R+R ER R+ R RE++
Sbjct: 351 RDRTKERDRD-RDRERD 366
Score = 80.5 bits (197), Expect = 9e-15
Identities = 41/72 (56%), Positives = 62/72 (86%), Gaps = 3/72 (4%)
Query: 329 ERLQMDEELR-RERERERERE-REREADREREKEREREREKEREQEKEREREKERERELE 386
ER ++++E R RERERERERE RERE +RERE+ERE+E+E+ERE+E++R+R++ +ER+ +
Sbjct: 301 ERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRD 360
Query: 387 RQREQ-RAREKE 397
R RE+ R R++E
Sbjct: 361 RDRERDRDRDRE 372
Score = 63.2 bits (152), Expect = 1e-09
Identities = 33/81 (40%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 318 LHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQ-EKERE 376
+ ++ +S E + + ++ E + ++E+ER+ + +ERERERE+ERE+ E+ERE
Sbjct: 269 MEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERE 328
Query: 377 REKERERELERQREQRAREKE 397
RE+ERERE E++RE R RE++
Sbjct: 329 REREREREKEKERE-RERERD 348
Score = 55.1 bits (131), Expect = 4e-07
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 317 ALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKE-- 374
A + ER+ + E +E ERE ER RE + +R KE + + +R+ K
Sbjct: 455 AAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYR 514
Query: 375 ----REREKERERELERQREQRAREKELLAAKALEPSFL------PVAELHGLRGHATEE 424
++R ++RE+E+E R REKE L + + L P AEL + A
Sbjct: 515 GSALQKRLRDREKEMEADERDRKREKEEL--EEIRQRLLAEGHPDPDAELQRMEQEAERR 572
Query: 425 R---------GKPSEQLTPTRAEKLKDAGLQAPKPVQHP-LHPVPTPHHTVPSLISNHG- 473
R + E+ + EK ++ + +P Q P L P P + PS+ S G
Sbjct: 573 RQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSASGN 632
Query: 474 -IFSLPSSSAATALLIQRTNEEEKWLARQRR 503
+ P + ++I N ++ + R
Sbjct: 633 ATPNTPGDESPCGIIIPHENSPDQQQPEEHR 663
Score = 54.3 bits (129), Expect = 7e-07
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
Query: 331 LQMDEELR----REREREREREREREADR-EREKEREREREKEREQEKEREREKE-RERE 384
++M+E+ R RE + R+ ++ E ++ ++EKER+ ++ RE+E+ERERE+E RERE
Sbjct: 267 IEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERE 326
Query: 385 LERQREQRAREKE 397
ER+RE R REKE
Sbjct: 327 RERERE-REREKE 338
Score = 33.5 bits (75), Expect = 1.3
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 35/217 (16%)
Query: 743 EERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLT 802
EERRR A+E + + YD D+ + + R A Q L+ ++ + ++
Sbjct: 483 EERRREMAKEAKRLKEFLEDYD--DDRDDPKYYRGSALQKRLR-----DREKEMEADERD 535
Query: 803 TQQQKEELVAQKRRKRRRMLRERSPSPPT-IQSKRQTPSPRLALSTRYSPDEMNNSPNFE 861
+++KEEL R+R+L E P P +Q Q R + P+ S E
Sbjct: 536 RKREKEEL----EEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPE----SEEEE 587
Query: 862 EKKKFLTIFNLTHISAEKRKDKERLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEP 921
E+K+ EK + +E +E +QK ++++P S A + P
Sbjct: 588 EEKQ------------EKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSASGNATP 635
Query: 922 ATQQASLDVEKPVGVAASLSDIPKAAEPGKLEQVRPQ 958
T E P G+ + P +P E+ RP+
Sbjct: 636 NTP----GDESPCGIIIPHENSPDQQQP---EEHRPK 665
Score = 32.0 bits (71), Expect = 3.7
Identities = 28/146 (19%), Positives = 66/146 (45%), Gaps = 32/146 (21%)
Query: 1082 QQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFE---------- 1131
++E R+ +E ++D + + EED+ED + ++ +RK + EA ++
Sbjct: 410 EREREREREREREREREKDKKRDREEDEEDAYERRKL-ERKLREKEAAYQERLKNWEIRE 468
Query: 1132 -----AYQEHIEEQNLERQVLQTQCRRL------------EARHYSLSLTAEQLSHSVAE 1174
Y++ E + R+ + + +RL + ++Y S ++L E
Sbjct: 469 RKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKE 528
Query: 1175 LRSQKQKMVSERERLQAELDHLRKCL 1200
+ + ++ +R+R + EL+ +R+ L
Sbjct: 529 MEADER----DRKREKEELEEIRQRL 550
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 92.8 bits (229), Expect = 2e-18
Identities = 99/381 (25%), Positives = 161/381 (42%), Gaps = 61/381 (16%)
Query: 329 ERLQMDEELR---REREREREREREREADREREKEREREREKEREQEKEREREKEREREL 385
E+ EE+R RE+ERERE+E E+E ++EREKERE++RE+++E+EKE E+E+E++RE+
Sbjct: 496 EKQPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREM 555
Query: 386 ERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTP--------TRA 437
E++R+Q +EKEL K E + E +ER K E++ P
Sbjct: 556 EKERKQE-KEKELERQKEKEKELQKMKE-QEKECELEKEREKLEEKIEPREPNLEPMVEK 613
Query: 438 EKLKDAGLQAPKPV-------QHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQ- 489
++ +++ + +PV + P H T P S P + + Q
Sbjct: 614 QESENSCNKEEEPVFTRQDSNRSEKEATPVVHETEPESGSQ------PRPAVLSGYFKQF 667
Query: 490 RTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRP-ESTTRP 548
+ + ++ +Q +++Q++ +Q Q Q V Q PP P HRP +P
Sbjct: 668 QKSLPPRFQRQQEQMKQQQWQQQQQQGVLPQTVPSQPSSSTVPPPP----HRPLYQPMQP 723
Query: 549 GPNRHEPGGRDP----------PQHFGGPPP---------LISPKPQLHAAPTALWNPVS 589
P G DP P+ G P +I PKP + + +
Sbjct: 724 HPQHLASMGFDPRWLMMQSYMDPRMMSGRPAMDIPPIHPGMIPPKPLMRR------DQME 777
Query: 590 LMDNTLETRRAESHSLHSHPAAFEPSRQA----AVPLVKVERVFCPEKAEEGPRKREPAP 645
N+ E+ + S H + R P + ++ P+ EE R A
Sbjct: 778 GSPNSSESFEHIARSARDHAISLSEPRMLWGSDPYPHAEPQQATTPKATEEPEDVRSEAA 837
Query: 646 LDKYQPPPPPPREGGSLEHQP 666
LD+ Q E LE P
Sbjct: 838 LDQEQITAAYSVEHNQLEAHP 858
Score = 39.3 bits (90), Expect = 0.023
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 14/128 (10%)
Query: 8 PKSPSLGMLSTATRTTATVNPLTPSPLNGALVPSGSPATSSALSAQAAPSSSFAAALRKL 67
P SP + ++A+ + + + + + + P+ +PA + L++ + P A++ L
Sbjct: 1802 PASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTP-----ASVTIL 1856
Query: 68 AKQAEEPRGSSLSSESSPVSSPATNHSSPA-------STPKRVPMGPIIVPPGGHSVPST 120
A + S+L+S S+P +PA SSPA + P P + + P S P+
Sbjct: 1857 ASASIPILASALASTSAPTPAPAA--SSPAAPVITAPTIPASAPTASVPLAPASASAPAP 1914
Query: 121 PPVVTIAP 128
P AP
Sbjct: 1915 APTPVSAP 1922
Score = 38.9 bits (89), Expect = 0.030
Identities = 59/257 (22%), Positives = 91/257 (35%), Gaps = 24/257 (9%)
Query: 2 KGMSHEPKSPSLGMLSTAT-----RTTATVNPLTPSPLNGALVPSGSPATSSALSAQAAP 56
KG S K P AT +++A+V PL +PL + S +TS+ L A P
Sbjct: 1717 KGRSQTSKLPPRFAKKQATGIQQAQSSASVPPLASAPLPPSTSASVPASTSAPLPATLTP 1776
Query: 57 SSSFAAALRKLAKQAEEPRGSSLSSESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHS 116
+ +A + A +S +SP++ + + S AS P I S
Sbjct: 1777 VPASTSAPVPASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSSAPAS 1836
Query: 117 VPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGPA----- 171
P+ P++ T + S S S +S P P A PA
Sbjct: 1837 APAPTPILASVSTPASVTILASASIPILASALAS-------TSAPTPAPAASSPAAPVIT 1889
Query: 172 ---IPSHLLSTPYPFGLSPSSVVQDSRFP-PLNLQRPVHHVVPPSTVTEDYLRSFRPYHT 227
IP+ + P L+P+S + P P++ P P T + + P T
Sbjct: 1890 APTIPASAPTASVP--LAPASASAPAPAPTPVSAPNPA-PPAPAQTQAQTHKPVQNPLQT 1946
Query: 228 TDDLRMSSLPPLGLDPA 244
T P + L A
Sbjct: 1947 TSQSSKQPPPSIRLPSA 1963
Score = 37.4 bits (85), Expect = 0.088
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 1070 SSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAV 1129
SS PPP+ QQ PP R+ P + S+++ ++DE + +E
Sbjct: 403 SSHLPPPPKLLAQQHPPPDRQAVPGRPGPFPSKQQVADEDEIWKQRRRQQSEISAAVERA 462
Query: 1130 FEAYQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERER- 1188
+ +E EE+ +E Q +L+ L + +Q S E+R ++++ ERE+
Sbjct: 463 RKRREE--EERRMEEQRKAACAEKLKRLDEKLGILEKQ--PSPEEIREREREKEREREKE 518
Query: 1189 LQAELDHLRK 1198
L+ E + R+
Sbjct: 519 LEKEQEQERE 528
Score = 34.7 bits (78), Expect = 0.57
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 1073 RAPPPQHNGQQEPPTARKGPPTQELDRDSE-EEEEEDDEDGEDEEEVPKRKWQGIEAVFE 1131
+ P P+ ++E R+ E +++ E E+E E D + + E+E K Q + E
Sbjct: 497 KQPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREME 556
Query: 1132 AYQEHIEEQNLERQ---VLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERE 1187
++ +E+ LERQ + Q + + + L E+L + + MV ++E
Sbjct: 557 KERKQEKEKELERQKEKEKELQKMKEQEKECELEKEREKLEEKIEPREPNLEPMVEKQE 615
Score = 32.7 bits (73), Expect = 2.2
Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 41/245 (16%)
Query: 461 PHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLR------QEKEDRQSQ 514
PHHT + + F P +A +R + E +R+R + Q+ ++++S+
Sbjct: 884 PHHTDAN--NQSACFEAPDQKTLSAPQEERISAVESQPSRKRSVSHGSNHTQKPDEQRSE 941
Query: 515 VSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRP--GPNRHEPGGRDPPQHFGGPPPLIS 572
S +V + +D P E + + E R GP + E + + GP P +
Sbjct: 942 PSAGIPKVTSRCIDSKEPIERPEEKPKKEGFIRSSEGP-KPEKVYKSKSETRWGPRPSSN 1000
Query: 573 PKPQLHAAPTALWNPVSL-----MDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVER 627
+ +++ P P+ M E R+ + K E+
Sbjct: 1001 RREEVNDRPVRRSGPIKKPVLRDMKEEREQRKEKEGE-------------------KAEK 1041
Query: 628 VFCPEKAEEGPRKREPAPLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILG 687
V EK P K E L PPPPPP + + +P P AE ST+T
Sbjct: 1042 V--TEKVVVKPEKTEKKDL----PPPPPPPQPPAPIQPQSVPPPIQPEAEKFPSTETATL 1095
Query: 688 QQRAS 692
Q+ S
Sbjct: 1096 AQKPS 1100
Score = 31.6 bits (70), Expect = 4.8
Identities = 38/140 (27%), Positives = 56/140 (40%), Gaps = 25/140 (17%)
Query: 711 PYRPPVPRAPDP------AYIYDEFLQQRRRLVSKLDL----------EERRRREAQEKG 754
P R VP P P DE +QRRR S++ EE RR E Q K
Sbjct: 420 PDRQAVPGRPGPFPSKQQVADEDEIWKQRRRQQSEISAAVERARKRREEEERRMEEQRKA 479
Query: 755 YYYDLDDSYDES--------DEEEVRAHLRCVAEQPPLKLDTSSEK-LEFLQLFGLTTQQ 805
+ DE EE+R R + +L+ E+ E + QQ
Sbjct: 480 ACAEKLKRLDEKLGILEKQPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQ 539
Query: 806 QKEELVAQKRRKRRRMLRER 825
+KE+ + +++ K+R M +ER
Sbjct: 540 EKEKELEKEQEKQREMEKER 559
Score = 31.2 bits (69), Expect = 6.3
Identities = 23/120 (19%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 1036 QKALQKHKGSVAVLSAEQNHKVDTSVHYNIPELQSSSRAPPPQHNGQQEPPTARKGPPTQ 1095
++ +K + L EQ + + + Q + + Q+E RK +
Sbjct: 506 EREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEK 565
Query: 1096 ELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQVLQTQCRRLE 1155
EL+R E+E+E +++E +++ + +E E + ++E +E+Q + C + E
Sbjct: 566 ELERQKEKEKELQKMKEQEKECELEKEREKLEEKIEPREPNLEPM-VEKQESENSCNKEE 624
Score = 30.8 bits (68), Expect = 8.2
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 9/140 (6%)
Query: 325 GLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERE 384
G E++ + R R RE DR + ++ R+ ++ERE+ KE+E E
Sbjct: 978 GPKPEKVYKSKSETRWGPRPSSNRREEVNDRPVRRSGPIKKPVLRDMKEEREQRKEKEGE 1037
Query: 385 -LERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDA 443
E+ E+ + E K L P P ++ + +P + P+ +
Sbjct: 1038 KAEKVTEKVVVKPEKTEKKDLPPPPPPPQPPAPIQPQSVPPPIQPEAEKFPS-----TET 1092
Query: 444 GLQAPKPVQ---HPLHPVPT 460
A KP Q PL PV T
Sbjct: 1093 ATLAQKPSQDTEKPLEPVST 1112
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 90.1 bits (222), Expect = 1e-17
Identities = 75/219 (34%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKE-REREK 379
E+ L ER + + E RE+ER+RER+R+R+ DRERE+ERER+REKERE+E+E RERE+
Sbjct: 702 EKERELERERAR-EREREREKERDRERDRDRDHDRERERERERDREKEREREREERERER 760
Query: 380 ERERELERQREQ-----RAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTP 434
ERERE ER+RE+ R R+KE + E + R E+R
Sbjct: 761 ERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRNPRDGHDER 820
Query: 435 TRAEKLKDAGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEE 494
++ ++ G +P P Q P H+ S N G + LL Q +
Sbjct: 821 KSKKRYRNEG--SPSPRQSPKR---RREHSPDSDAYNSG----DDKNEKHRLLSQVVRPQ 871
Query: 495 E------KWLARQRRLRQEKEDRQSQVSEFRQQVLEQHL 527
E L R+ R ++EDR+ + E ++ EQ L
Sbjct: 872 ESRSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQEL 910
Score = 87.0 bits (214), Expect = 1e-16
Identities = 43/74 (58%), Positives = 57/74 (77%), Gaps = 10/74 (13%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQEK----------EREREKERER 383
+ E RERER+RERE+ERE +RER +EREREREKER++E+ ERERE++RE+
Sbjct: 688 ERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREK 747
Query: 384 ELERQREQRAREKE 397
E ER+RE+R RE+E
Sbjct: 748 EREREREERERERE 761
Score = 86.7 bits (213), Expect = 1e-16
Identities = 38/66 (57%), Positives = 55/66 (83%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 391
+ + + RE+ERE ERER RE +REREKER+RER+++R+ ++ERERE+ER+RE ER+RE+
Sbjct: 694 ERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKERERER 753
Query: 392 RAREKE 397
RE+E
Sbjct: 754 EERERE 759
Score = 85.9 bits (211), Expect = 2e-16
Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Query: 328 AERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELER 387
A + E RERERERERER+RE ++ERE ERER RE+ERE+EKER+RE++R+R+ +R
Sbjct: 676 ARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDR 735
Query: 388 QRE---QRAREKE 397
+RE +R REKE
Sbjct: 736 ERERERERDREKE 748
Score = 84.7 bits (208), Expect = 5e-16
Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 7/71 (9%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ-- 391
D R RER+RERER+RE +RERE+ER+REREKERE E+ER RE+ERERE ER RE+
Sbjct: 670 DRRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERDR 729
Query: 392 -----RAREKE 397
R RE+E
Sbjct: 730 DRDHDRERERE 740
Score = 83.6 bits (205), Expect = 1e-15
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 309 ELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADRERE-KEREREREK 367
EL ER ER D + RERERERER+RE+E +RERE +ERERERE+
Sbjct: 706 ELERERAREREREREKERDRER-DRDRDHDRERERERERDREKEREREREERERERERER 764
Query: 368 EREQEKEREREKERERELERQREQRAREKE 397
ERE+E+ERERE+ RER+ ER+R++ +K+
Sbjct: 765 ERERERERERERARERDKERERQRDWEDKD 794
Score = 75.5 bits (184), Expect = 3e-13
Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 378
H R L + + + + R +R ER RER+ +RER++ERERERE+ER++E+E+ERE
Sbjct: 647 HQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKERE 706
Query: 379 KERERELERQREQRAREKE 397
ERER ER+RE REKE
Sbjct: 707 LERERARERERE---REKE 722
Score = 68.2 bits (165), Expect = 5e-11
Identities = 34/76 (44%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 318 LHSERMSGLSAERLQMDEELRRERERERERE--REREADREREKEREREREKEREQEKER 375
+HS S S +RLQ + +RERERER R+RE DR+ +K+ R R+++R +E+ER
Sbjct: 1286 VHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERER 1345
Query: 376 EREKERERELERQREQ 391
ERE+++ R+L+R+RE+
Sbjct: 1346 ERERDKRRDLDRERER 1361
Score = 60.5 bits (145), Expect = 1e-08
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 305 RYPP-----ELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERER-EREADRERE 358
RYP + SS H ER + ER Q R + R E ER ER +R +
Sbjct: 607 RYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVD 666
Query: 359 KEREREREKEREQEKEREREKERERELERQRE-QRAREKELLAAKALE 405
+ +R E+ RE+++ERER++ERERE ER+R+ +R +E+EL +A E
Sbjct: 667 RVDDRRDERARERDRERERDRERERERERERDREREKERELERERARE 714
Score = 52.8 bits (125), Expect = 2e-06
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 393
D++ R R+R+R RERERE +R++ ++ +RERE+ ER+R+++R+R E + +
Sbjct: 1328 DKDWPRNRDRDRLRERERERERDKRRDLDRERERLISDSVERDRDRDRDRTFESSQIESV 1387
Query: 394 REKE 397
+ E
Sbjct: 1388 KRCE 1391
Score = 50.4 bits (119), Expect = 1e-05
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 339 REREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKEL 398
R+R+R RERERERE D+ R+ +RERER E++R+R+++R E + + E +L
Sbjct: 1335 RDRDRLRERERERERDKRRDLDRERERLISDSVERDRDRDRDRTFESSQIESVKRCEAKL 1394
Score = 43.5 bits (101), Expect = 0.001
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 25/104 (24%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE-- 376
HS R S ++R Q+ R+R +ER+R E +RERE+ER ++RE
Sbjct: 1273 HSSRRSSPESDR-QVHSRSGSFDSRDRLQERDRY-------EHDRERERERRDTRQREWD 1324
Query: 377 ------------REKERERELERQREQRA---REKELLAAKALE 405
R++ RERE ER+R++R RE+E L + ++E
Sbjct: 1325 RDADKDWPRNRDRDRLRERERERERDKRRDLDRERERLISDSVE 1368
Score = 40.8 bits (94), Expect = 0.008
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Query: 276 LRSPFYPIPTPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDE 335
LR P P+ P + H S +R H ER S R + E
Sbjct: 367 LRRSASPYPSHSLSSPQRKQSPPRHRSPMREKGRHDH--------ERTSQSHDRRHERRE 418
Query: 336 ELRREREREREREREREADREREKEREREREKEREQEKERE--REKERERELERQREQR 392
+ R +R+RE++ ERE ++++ R+ ++E ++R R+ REL R+ R
Sbjct: 419 DTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMR 477
Score = 37.4 bits (85), Expect = 0.088
Identities = 105/514 (20%), Positives = 184/514 (35%), Gaps = 75/514 (14%)
Query: 338 RRERERE----REREREREADREREKEREREREKEREQEKEREREKERERE---LERQRE 390
RR ER RER + + D + E ++ E KE R + RE+E + ++R
Sbjct: 75 RRSPERPTGDLRERMKNKRQDVDTEPQKRNTEESSSPVRKESSRGRHREKEDIKITKERT 134
Query: 391 QRAREKELLAAKALEPS--------FLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKD 442
+ E+ + + S ++ L R E K EQ + E++
Sbjct: 135 PESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMK-LEQENMEKREEIII 193
Query: 443 AGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQR 502
+P+ V+ L P P+ + S S P SS+A+ + + L +QR
Sbjct: 194 KKEVSPEVVRSKLSPSPSLRKSSKSPKRK----SSPKSSSASKKDRKTSAVSSPLLDQQR 249
Query: 503 RLRQEKEDRQSQVSEFRQQVLEQHLDMGRP-PVPAEAEHRPESTTRPGPNRHEPGGRD-- 559
+ + ++ + + + + +G+ + + R E TR G +R GRD
Sbjct: 250 NSKTNQSKKKGPRTPSPPPPIPEDIALGKKYKEKYKVKDRIEEKTRDGKDR----GRDFE 305
Query: 560 PPQHFGGPPPLISPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPS-RQA 618
+ P SP Q H +P+S ++ ++ S HS PS R+
Sbjct: 306 RQREKRDKPRSTSPAGQHH-------SPISSRHHSSSSQSGSSIQRHS------PSPRRK 352
Query: 619 AVPLVKVERVFCP---EKAEEGPRKREPAPLDKYQPP--PPPPREGGSLEHQPFLPGPGP 673
P +R P A P +P K PP P RE G +H+
Sbjct: 353 RTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRHRSPMREKGRHDHE-------- 404
Query: 674 FLAELEKSTQTILGQQRASLPQAATFGELSGPLKPGSPYRPPVPRAPDPAYIYDEFLQQR 733
+T R + T G+ R + + + R
Sbjct: 405 ---------RTSQSHDRRHERREDTRGK-----------RDREKDSREEREYEQDQSSSR 444
Query: 734 RRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAE-QPPLKLDTSSEK 792
+ + R RR+A++ +L DS D D E+R + R E + P ++ +
Sbjct: 445 DHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDA 504
Query: 793 LEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERS 826
++ G T ++++ + R R LRE S
Sbjct: 505 HDYRDREGRDTHRKEDTYPEESRSYGRNHLREES 538
Score = 33.1 bits (74), Expect = 1.7
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 338 RREREREREREREREADREREKEREREREKEREQEKER---EREKERERELERQRE 390
R++ R E+DR+ ++R QE++R +RE+ERER RQRE
Sbjct: 1267 RQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQRE 1322
Score = 31.2 bits (69), Expect = 6.3
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Query: 308 PELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERERERE-ADREREKERERERE 366
PEL ++ S+ D R ER+R ER+ D+ R+ ER R
Sbjct: 568 PELPEKGSRGSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQARDSSFER-RH 626
Query: 367 KEREQEKEREREKE---------RERELER--------------QREQRAREKE 397
ER++ RER++ R ELER +R++RARE++
Sbjct: 627 GERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERD 680
Score = 31.2 bits (69), Expect = 6.3
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 10/126 (7%)
Query: 326 LSAERLQMDEELR-RERERERER-EREREADREREKEREREREKEREQEKEREREKERER 383
LS L D + R +E +R+ ER E R + + KE+ +K+REQ + E + R +
Sbjct: 876 LSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQ 935
Query: 384 EL-------ERQREQRAREKELLAAKALEPSFLPVAELH-GLRGHATEERGKPSEQLTPT 435
++ +R+ RA ++ AK + E G+ E + + +P
Sbjct: 936 DIIGHHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDGQVFSPK 995
Query: 436 RAEKLK 441
+ +K K
Sbjct: 996 KGQKKK 1001
Score = 31.2 bits (69), Expect = 6.3
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 23 TATVNPLTPSPLNGALVPSGSPATSSALSAQAAPSSSFAAALRKLAKQAEEPRGSSLSSE 82
TAT TPSPL+ L P AT++A + A +++ AAA + A ++S+
Sbjct: 1086 TATTPGSTPSPLSSLLPPPPPVATATATTVPATLAATTAAAATSFSTSA-----ITISTS 1140
Query: 83 SSPVSS 88
++P ++
Sbjct: 1141 ATPTNT 1146
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 86.3 bits (212), Expect = 2e-16
Identities = 42/69 (60%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Query: 330 RLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQR 389
R + D E R+RER+RERERERE +R+RE+ERERERE+ER++E ER+REKERER+ +RQ
Sbjct: 290 RTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQT 349
Query: 390 E-QRAREKE 397
E R R ++
Sbjct: 350 EMDRERNRQ 358
Score = 81.3 bits (199), Expect = 5e-15
Identities = 38/79 (48%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 378
HSER ER + + E R+R+ +RER+R+R+ +REREK+ ERER ERE E+++ERE
Sbjct: 205 HSERGRERERER-ETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERE 263
Query: 379 KERERELERQREQRAREKE 397
+ER+R+ +R R Q+ RE++
Sbjct: 264 RERDRDRDRDRRQKERERQ 282
Score = 81.3 bits (199), Expect = 5e-15
Identities = 40/77 (51%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
ER +R Q + E + +R+R+R ER+RE +R+RE++RERERE+ER +++ERERE+E
Sbjct: 265 ERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERE 324
Query: 381 RERELERQREQRAREKE 397
RERE +R+ E R REKE
Sbjct: 325 RERERQRETE-RDREKE 340
Score = 78.6 bits (192), Expect = 3e-14
Identities = 35/65 (53%), Positives = 51/65 (78%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 391
Q D + +R ER+RE ER+RE RERE+ERER R++ERE+E+ERERE++RE E +R++E+
Sbjct: 282 QTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKER 341
Query: 392 RAREK 396
+ K
Sbjct: 342 ERKRK 346
Score = 76.6 bits (187), Expect = 1e-13
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 15/119 (12%)
Query: 321 ERMSGLSAERLQMDEELRRERERERER-----EREREADR------EREKEREREREKER 369
ER S ER D+E RER+R+R+R ERER+ DR ER++E ER+RE++R
Sbjct: 249 ERASERETER---DKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQR 305
Query: 370 EQEKEREREKERERELERQRE-QRAREKELLAAKALEPSFLPVAELHGLRGHATEERGK 427
E+E+ERER ++RERE ER+RE +R RE E K E E+ R T G+
Sbjct: 306 ERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGR 364
Score = 76.3 bits (186), Expect = 2e-13
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 24/90 (26%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQ-------------------- 371
Q + E RER R+RERERERE +RER++E ER+REKERE+
Sbjct: 304 QRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREG 363
Query: 372 ----EKEREREKERERELERQREQRAREKE 397
E+ERERE+ER+R+ R+RE+R R+++
Sbjct: 364 RRQAERERERERERDRQSAREREERERDRD 393
Score = 75.1 bits (183), Expect = 4e-13
Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEK------EREREKEREREL 385
Q D + RER+R+ E+ERER+ DRER+++ ER R+KERE+EK ERER++E+E +
Sbjct: 142 QTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKT 201
Query: 386 ERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATE-ERGKPSEQLTPTRAEKLKD 442
E + +R RE+E E + R TE ER K +E+ + E +D
Sbjct: 202 EDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERD 259
Score = 74.3 bits (181), Expect = 6e-13
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 17/94 (18%)
Query: 329 ERLQMDEELRREREREREREREREADREREKERERE--------REKEREQEKEREREKE 380
E+ Q + E R+RER RE++R R+ DR RE++R+RE RE++R++EKER R+KE
Sbjct: 67 EKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKE 126
Query: 381 RERELERQRE---------QRAREKELLAAKALE 405
RERE ER+ E QR RE++ A K E
Sbjct: 127 RERETEREGERGRDRQTDGQRERERQRDAEKERE 160
Score = 73.6 bits (179), Expect = 1e-12
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQ--- 388
+ E RERER R+RERERE +RERE++RE ER++E+E+E++R+R+ E +RE RQ
Sbjct: 302 ERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGR 361
Query: 389 --REQRAREKE 397
R Q RE+E
Sbjct: 362 EGRRQAERERE 372
Score = 73.2 bits (178), Expect = 1e-12
Identities = 34/78 (43%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
+R ER + E+ + ERE +R+RER RE DR R+++R RER+++RE+E+ER+ ++E
Sbjct: 53 DRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRE 112
Query: 381 RERELERQR-EQRAREKE 397
R+R+ E++R Q+ RE+E
Sbjct: 113 RDRQREKERNRQKERERE 130
Score = 72.0 bits (175), Expect = 3e-12
Identities = 38/83 (45%), Positives = 60/83 (72%), Gaps = 7/83 (8%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE---- 376
ER + ER + + R+R+R+ ERERE++A+RER ERE ER+KERE+E++R+
Sbjct: 215 ERETETETERKRQTDR-ERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRD 273
Query: 377 -REKERERELERQREQRA-REKE 397
R+KERER+ +R+R++R R++E
Sbjct: 274 RRQKERERQTDRKRQRRTERDRE 296
Score = 72.0 bits (175), Expect = 3e-12
Identities = 35/67 (52%), Positives = 53/67 (79%), Gaps = 2/67 (2%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 390
Q + E ERE ER++ERERE DR+R+++R R++E+ER+ +++R+R ER+RE ER+RE
Sbjct: 245 QAERERASERETERDKERERERDRDRDRDR-RQKERERQTDRKRQRRTERDRETERKRER 303
Query: 391 QRAREKE 397
QR RE+E
Sbjct: 304 QRERERE 310
Score = 71.6 bits (174), Expect = 4e-12
Identities = 43/88 (48%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Query: 320 SERMSGLSAERLQMDE-ELRREREREREREREREADREREKERERER--------EKERE 370
+ER AER + E E R++ERERER+R+R+ DR R+KERER+ E++RE
Sbjct: 238 TEREREKQAERERASERETERDKERERERDRDRDRDR-RQKERERQTDRKRQRRTERDRE 296
Query: 371 QEKEREREKERERELERQRE-QRAREKE 397
E++RER++ERERE ER R+ +R RE+E
Sbjct: 297 TERKRERQRERERERERNRKRERERERE 324
Score = 70.9 bits (172), Expect = 7e-12
Identities = 34/79 (43%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 320 SERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREK 379
+ER ER + R ERER+R+R+R++E +R+ EK+R+ +RE E+++E+E++RE
Sbjct: 367 AERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRES 426
Query: 380 ERERELERQRE-QRAREKE 397
ER RE R+RE Q+ RE++
Sbjct: 427 ERGRERGREREKQKGRERD 445
Score = 70.5 bits (171), Expect = 9e-12
Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 28/144 (19%)
Query: 319 HSERMSGLSAER-LQMDEELRREREREREREREREAD----------------REREKER 361
H ER ER Q D E R+RE+ER R++ERE + RERE++R
Sbjct: 94 HRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQR 153
Query: 362 EREREKEREQEKEREREKERERELERQRE---QRAREKELLAAKALEPSFLPVAELHGLR 418
+ E+E+ER+ ++ER+R+ ER R+ ER+RE Q RE+E K + + H R
Sbjct: 154 DAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENK-----TEDRHSER 208
Query: 419 GHATEERGKPSEQLTPTRAEKLKD 442
G ER + E T T ++ D
Sbjct: 209 G---RERERERETETETERKRQTD 229
Score = 70.5 bits (171), Expect = 9e-12
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 23/99 (23%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKERERER--------------- 365
ER ER + + + RERERERERER+RE +R+REKERER+R
Sbjct: 302 ERQRERERER-ERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTG 360
Query: 366 -------EKEREQEKEREREKERERELERQREQRAREKE 397
E+ERE+E+ER+R+ RERE + R R+KE
Sbjct: 361 REGRRQAERERERERERDRQSAREREERERDRDRDRQKE 399
Score = 70.5 bits (171), Expect = 9e-12
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 10/77 (12%)
Query: 330 RLQMDEELRRERERERE-----REREREADREREKEREREREKER----EQEKEREREKE 380
R Q + E RERER+R+ ERER+ DR+R+KERER+ EK+R E EK+REREK+
Sbjct: 364 RRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKD 423
Query: 381 RERELERQREQRAREKE 397
RE E R+R R REK+
Sbjct: 424 RESERGRER-GREREKQ 439
Score = 70.1 bits (170), Expect = 1e-11
Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
ER + ER + + + R+R++ERER+ E++ D +RE E++REREK+RE E+ RER +E
Sbjct: 376 ERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGRE 435
Query: 381 RERELERQREQRAREKELLAAKALEPSFLPV 411
RE++ R+R+ R R+ + A + + S L V
Sbjct: 436 REKQKGRERD-RERQTDRQAGRQRKRSTLYV 465
Score = 69.7 bits (169), Expect = 2e-11
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 14/83 (16%)
Query: 329 ERLQMDEELRRERERERERERE------------READREREKEREREREKEREQ--EKE 374
E+ E+ ER RERERERE RE DR+R+ ERERE++ ERE+ E+E
Sbjct: 196 EKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERE 255
Query: 375 REREKERERELERQREQRAREKE 397
ER+KERERE +R R++ R+KE
Sbjct: 256 TERDKERERERDRDRDRDRRQKE 278
Score = 69.3 bits (168), Expect = 2e-11
Identities = 66/236 (27%), Positives = 100/236 (42%), Gaps = 54/236 (22%)
Query: 325 GLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERE 384
G ER + E RR +R+ ERE +R+ +R REK+R R+R++ R E++R+REKERER+
Sbjct: 51 GDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHR--ERQRDREKERERQ 108
Query: 385 LERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAG 444
+R+R+ R REKE K E E G RG + G+ E+ +DA
Sbjct: 109 TDRERD-RQREKERNRQKERERE----TEREGERGRDRQTDGQ-------RERERQRDAE 156
Query: 445 LQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQR-R 503
+ + QR E + R+R +
Sbjct: 157 KERERQTDRER---------------------------------QRQTERNRQKEREREK 183
Query: 504 LRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRD 559
RQE+ +R+ Q E + ++H + GR E E E+ T R RD
Sbjct: 184 NRQERRERERQ-REKENKTEDRHSERGR-----ERERERETETETERKRQTDRERD 233
Score = 68.6 bits (166), Expect = 4e-11
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 19/104 (18%)
Query: 321 ERMSGLSAER-LQMDEELRREREREREREREREADREREKEREREREKE----------- 368
ER ER Q D E +R+ ER R++ERERE +R+ +ERER+REKE
Sbjct: 150 ERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERG 209
Query: 369 --REQEKEREREKERERELERQRE-----QRAREKELLAAKALE 405
RE+E+E E E ER+R+ +R+R+ +R REK+ +A E
Sbjct: 210 RERERERETETETERKRQTDRERDRQRKTEREREKQAERERASE 253
Score = 67.0 bits (162), Expect = 1e-10
Identities = 38/89 (42%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 320 SERMSGLSAERLQMDEELRRERERERERE---REREADREREKEREREREKEREQEKERE 376
+ER ER + +E RRERER+RE+E +R ++R RE+ERERE E E E++++ +
Sbjct: 171 TERNRQKEREREKNRQE-RRERERQREKENKTEDRHSERGRERERERETETETERKRQTD 229
Query: 377 REKERERELERQREQRAREKELLAAKALE 405
RE++R+R+ ER+RE++A E+E + + E
Sbjct: 230 RERDRQRKTEREREKQA-ERERASERETE 257
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 81.3 bits (199), Expect = 5e-15
Identities = 178/852 (20%), Positives = 305/852 (35%), Gaps = 172/852 (20%)
Query: 336 ELRREREREREREREREADREREKEREREREKEREQEKEREREKER--ERELERQREQRA 393
EL++E ++R+ E+E+ A +++ E + +R+KE ++ +RE+ R R R R
Sbjct: 125 ELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRR 184
Query: 394 REKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQ------- 446
R + + S P E+ + + +L P + K+K+ +Q
Sbjct: 185 RSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPEL-PEPSVKVKEPSVQEATSTSD 243
Query: 447 ---APKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRR 503
PKP P+P P P S ++ E+EK R R
Sbjct: 244 ILKVPKP-----EPIPEPKEPSPEKNS------------------KKEKEKEKTRPRSRS 280
Query: 504 LRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQH 563
R + R S + +H R P RP RP P R R PP+
Sbjct: 281 -RSKSRSRTRSRSPSHTRPRRRHRSRSRSYSP---RRRPSPRRRPSPRR-----RTPPRR 331
Query: 564 FGGPPPLISPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLV 623
PPP P+ + +P + RR S SL ++ SR + P
Sbjct: 332 M--PPP---PRHRRSRSP-------------VRRRRRSSASLSGSSSSSSSSRSRSPPKK 373
Query: 624 KVERVFCPEKAEEGPRKREPAPLDKYQPPP---PPPREGGSLEHQPFLPGPGPFLAELEK 680
+R P + P +++P P PPP+ S P P ++
Sbjct: 374 PPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHS-------PTP-------QQ 419
Query: 681 STQTILGQQRASLPQAATFGELS---GPLKPGSPYRPPVPRAPDPAYIYDEFLQQRRRLV 737
S +T + R S+ T G+++ G K SP P PR + + + + ++
Sbjct: 420 SNRT--RKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVE---LSESEEDKGGKMA 474
Query: 738 SKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHL--------------RCVAEQP- 782
+ +++RR+ Q + D S DE R+H+ R + P
Sbjct: 475 AADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPR 534
Query: 783 PLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRML---RERSPSPPTIQSKRQTP 839
+ +TS T++++ A R+RR R R+PSPP +R++P
Sbjct: 535 KRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPP---PRRRSP 591
Query: 840 SPRL---ALSTRYSPD--------------EMNNSPNFEEKKKFLTIFNLTHISAEKRKD 882
SPR + RYSP + SP+ K++ ++H K++
Sbjct: 592 SPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRR------VSHSPPPKQRS 645
Query: 883 K---ERLVEMLRAMKQKALSAAVADSLTNSP----RDSPAVSLSEPATQQASLDV----- 930
+R L + +K S + + SP R SP+ P T + V
Sbjct: 646 SPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGAS 705
Query: 931 ------EKPVGVAASLSDIPKAAEPGKLEQV---RPQELSRVQELAPASGEKARLSEAPG 981
+ P + + + EP K+++ PQ + RV SG S P
Sbjct: 706 SSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSG-----SPEPA 760
Query: 982 GKKSLSMLHYIRGAAPK---DIPVPLSHSTNGKSKPWEPFVA-EEFAHQFHESVLQSTQK 1037
KK + ++ +P VP+ + + P P + +E + + K
Sbjct: 761 AKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHK 820
Query: 1038 ALQKHKGSVAVLSAEQNHKVDTSVHYNIPELQSSSRAPPPQHNGQQEPPTARKGPPTQEL 1097
+KHK + HK + +V + + QE P A P +
Sbjct: 821 KDKKHK-------KHKKHKKEKAVAAAAAAAVTPAAIAAATTTLAQEEPVA---APEPKK 870
Query: 1098 DRDSEEEEEEDD 1109
+ +SE E+ DD
Sbjct: 871 ETESEAEDNLDD 882
Score = 37.7 bits (86), Expect = 0.067
Identities = 44/188 (23%), Positives = 63/188 (33%), Gaps = 25/188 (13%)
Query: 31 PSPLNGALVPSGSPATSSALSAQAAPSSSFAAALRKLAKQAEEPRGSSLSSESSPVSSPA 90
P P PS P + S SS R + ++ +GSS S + SP
Sbjct: 618 PPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQ 677
Query: 91 TNHSSPASTPKRVPMGPIIVPPGGHSV-----------PSTPPVVTIAPTKTVNGVWRSE 139
N S R P PP PST P+ ++ T + ++
Sbjct: 678 PNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAA 737
Query: 140 S------RQDAGSRSSSGGRERLIVEPPLPQEKA--------GGPAIPSHLLSTPYPFGL 185
S R+ + SRS SG E +PP P PA+P +P P
Sbjct: 738 SPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPS 797
Query: 186 SPSSVVQD 193
P + Q+
Sbjct: 798 PPRNSDQE 805
Score = 37.4 bits (85), Expect = 0.088
Identities = 83/402 (20%), Positives = 139/402 (34%), Gaps = 73/402 (18%)
Query: 55 APSSSFAAALRKLAKQAEEPRGSSLSSESSPVSSPATNHSSPASTP----KRVPMGPIIV 110
+PS S + + RK K+ PRG S S P P SP+ P +R P
Sbjct: 524 SPSRSASPSPRKRQKETS-PRGRRRRSPSPP---PTRRRRSPSPAPPPRRRRTP-----T 574
Query: 111 PPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGP 170
PP PS PP + + R S S S +R PP P ++ P
Sbjct: 575 PPPRRRTPSPPP-------RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASP 627
Query: 171 AIP----------------------SHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHV 208
+ P S LS+ + G SPS +++R P N +R
Sbjct: 628 SPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPN-KRHSPSP 686
Query: 209 VPPSTVTEDYLRSFRPYHTTDDLRMSSLPPLGLDPATAAAYYHPSYL--APHPFPHPAFR 266
P + T R ++ R S P + P + A P P R
Sbjct: 687 RPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRR 746
Query: 267 MDDSYCLSALRSPFYPIPTPGSLPPLHPSAMHLHLSGVRYPPEL--------SHSSLAAL 318
+ S +S P PP PS + + P + + S
Sbjct: 747 VSSSRSVSGSPEP------AAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPR 800
Query: 319 HSERMSGLSAERLQMDEELRRERERERERERERE-------------ADREREKERERER 365
+S++ G ++ + D++ +++++ ++ ++ ++E A +
Sbjct: 801 NSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTTLAQE 860
Query: 366 EKEREQEKEREREKERERELERQREQRAREKELLAAKALEPS 407
E E ++E E E E L+ E+ REK L + + + S
Sbjct: 861 EPVAAPEPKKETESEAEDNLD-DLEKHLREKALRSMRKAQVS 901
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 79.0 bits (193), Expect = 3e-14
Identities = 35/73 (47%), Positives = 54/73 (73%)
Query: 320 SERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREK 379
+ER ER E R R+R+R RER+R+ DRE+E+ER++ER+++R++E+E ERE
Sbjct: 17 TERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERET 76
Query: 380 ERERELERQREQR 392
ER+RE +RQRE++
Sbjct: 77 ERQRERQRQRERK 89
Score = 75.5 bits (184), Expect = 3e-13
Identities = 37/79 (46%), Positives = 58/79 (73%), Gaps = 13/79 (16%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKE------------REQEKEREREK 379
+ + E R+RER+R+RER+R+ DRER+K+R+RER++E RE++K+ ERE+
Sbjct: 71 ETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERER 130
Query: 380 ERERELERQRE-QRAREKE 397
+RERE +RQRE +R R++E
Sbjct: 131 DRERERQRQRERERQRQRE 149
Score = 75.1 bits (183), Expect = 4e-13
Identities = 41/83 (49%), Positives = 61/83 (73%), Gaps = 6/83 (7%)
Query: 320 SERMSGLSAERLQMDEELR---REREREREREREREADREREKERE--REREKEREQEKE 374
+ER + ER + E R RER+++R+RER+RE DR RE+ R+ RER+K+ E+E++
Sbjct: 72 TERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERD 131
Query: 375 REREKERERELERQREQRAREKE 397
RERE++R+RE ERQR QR R++E
Sbjct: 132 RERERQRQRERERQR-QRERKRE 153
Score = 73.6 bits (179), Expect = 1e-12
Identities = 32/66 (48%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 390
Q D E RER++ER+R+R+RE + ERE ER+RER+++RE++++ +RE++++R+ ER+RE
Sbjct: 49 QTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRET 108
Query: 391 QRAREK 396
R RE+
Sbjct: 109 DRNRER 114
Score = 73.2 bits (178), Expect = 1e-12
Identities = 30/61 (49%), Positives = 50/61 (81%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 391
+ D + RE+ERER++ER+R+ RERE ERE ER++ER++++ER+R+ +RER+ +R RE+
Sbjct: 45 ERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRER 104
Query: 392 R 392
+
Sbjct: 105 K 105
Score = 72.4 bits (176), Expect = 2e-12
Identities = 33/84 (39%), Positives = 61/84 (72%), Gaps = 6/84 (7%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 378
H ER E+ + + + R+R+R+RERE ERE +R+RE++R+RER+++ ++E++++R+
Sbjct: 43 HRERDRQTDREK-ERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRD 101
Query: 379 KERERELERQREQ-----RAREKE 397
+ER+RE +R RE+ R R+K+
Sbjct: 102 RERKRETDRNRERNRKGGRERDKQ 125
Score = 72.0 bits (175), Expect = 3e-12
Identities = 39/75 (52%), Positives = 55/75 (73%), Gaps = 12/75 (16%)
Query: 335 EELRRERERERERE-------REREADREREKEREREREKEREQEKEREREKEREREL-- 385
+E RER+R+RERE R R+ DR RE++R+ +REKERE++KER+R+++RERE
Sbjct: 15 KETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETER 74
Query: 386 --ERQRE-QRAREKE 397
ERQRE QR RE++
Sbjct: 75 ETERQRERQRQRERK 89
Score = 72.0 bits (175), Expect = 3e-12
Identities = 31/66 (46%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 391
+ D++ RER+RERER+R+RE +R+R++ER+RE ++ER++ ERE E+++ER+ ER++E+
Sbjct: 121 ERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAERE-ERKKERKKERKKER 179
Query: 392 RAREKE 397
+ ++KE
Sbjct: 180 KEKKKE 185
Score = 71.2 bits (173), Expect = 5e-12
Identities = 30/64 (46%), Positives = 51/64 (79%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 393
+ E R+ RER+++ ERE DRERE++R+RERE++R++E++RE ++ER+R ER+ ++
Sbjct: 111 NRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKE 170
Query: 394 REKE 397
R+KE
Sbjct: 171 RKKE 174
Score = 70.9 bits (172), Expect = 7e-12
Identities = 32/70 (45%), Positives = 53/70 (75%), Gaps = 6/70 (8%)
Query: 334 DEELRRERERERER------EREREADREREKEREREREKEREQEKEREREKERERELER 387
D E +RE +R RER ER+++ +RER++ERER+R++ERE++++RER++E +RE +R
Sbjct: 101 DRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQR 160
Query: 388 QREQRAREKE 397
E+ R+KE
Sbjct: 161 WAEREERKKE 170
Score = 70.1 bits (170), Expect = 1e-11
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
ER ER D + R+RE +R RER R+ RER+K+ ERER++ERE++++RERE++
Sbjct: 87 ERKRQTDRER-DKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQ 145
Query: 381 RERELERQRE---QRAREKE 397
R+RE +R+ + QR E+E
Sbjct: 146 RQRERKRETDRERQRWAERE 165
Score = 68.9 bits (167), Expect = 3e-11
Identities = 33/74 (44%), Positives = 54/74 (72%), Gaps = 8/74 (10%)
Query: 332 QMDEELRREREREREREREREADRE---REKEREREREKEREQEKEREREKERERELERQ 388
+ D ERER+R+RERE + +RE R+++R RER+++ ++EKERER+KER+R+ +R+
Sbjct: 10 ETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRE 69
Query: 389 RE-----QRAREKE 397
RE +R RE++
Sbjct: 70 RETERETERQRERQ 83
Score = 68.6 bits (166), Expect = 4e-11
Identities = 28/66 (42%), Positives = 51/66 (77%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 391
+ D R R+ RER+++ E +R+RE+ER+R+RE+ER++++ER+RE +RER+ +RE+
Sbjct: 107 ETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREE 166
Query: 392 RAREKE 397
R +E++
Sbjct: 167 RKKERK 172
Score = 68.2 bits (165), Expect = 5e-11
Identities = 30/79 (37%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 329 ERLQMDEELRREREREREREREREADREREKEREREREKEREQ-EKEREREKERERELER 387
++ + + + RER+R+RERER+R+ +R+RE +RER+R ERE+ +KER++E+++ER+ ++
Sbjct: 124 KQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKK 183
Query: 388 QREQRAREKELLAAKALEP 406
+ E+R +K+ + + P
Sbjct: 184 KEEKRREDKKRKWGEGISP 202
Score = 67.0 bits (162), Expect = 1e-10
Identities = 34/72 (47%), Positives = 51/72 (70%), Gaps = 8/72 (11%)
Query: 333 MDEELRREREREREREREREADREREKE-------REREREKEREQEKEREREKEREREL 385
M+ + R+RE +R +E ERE DR+RE+E R R+R++ RE++++ +REKERER+
Sbjct: 1 MERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQK 60
Query: 386 ERQREQRAREKE 397
ER R QR RE+E
Sbjct: 61 ERDR-QRQRERE 71
Score = 66.6 bits (161), Expect = 1e-10
Identities = 29/67 (43%), Positives = 54/67 (80%), Gaps = 5/67 (7%)
Query: 336 ELRREREREREREREREADREREKEREREREKEREQEKER-----EREKERERELERQRE 390
E ++ ERER+RERER+ RERE++R+RER++E ++E++R ER+KER++E +++R+
Sbjct: 121 ERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERK 180
Query: 391 QRAREKE 397
++ +E++
Sbjct: 181 EKKKEEK 187
Score = 40.0 bits (92), Expect = 0.014
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 321 ERMSGLSAERLQMDEELRRERERER-------EREREREADREREKEREREREKEREQEK 373
ER ER Q E +RE +RER ER++ER+ +R++E++ +++ EK RE +K
Sbjct: 135 ERQRQRERER-QRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEEKRREDKK 193
Query: 374 ER 375
+
Sbjct: 194 RK 195
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 79.0 bits (193), Expect = 3e-14
Identities = 143/661 (21%), Positives = 237/661 (35%), Gaps = 142/661 (21%)
Query: 330 RLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQR 389
R+Q E RERERERERE +R+RE+ERERER++ERE+ ++RERE+ERE E +++R
Sbjct: 389 RVQYTETEPYHNYRERERERERE-NRQRERERERERDRERER-RQREREREREHERDKER 446
Query: 390 EQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPK 449
++R E E AK E R H +R K E+ K+ G P+
Sbjct: 447 QRRKEEWERERAKRDEKD----------RQHRDRDREK----------EREKEKGKPKPR 486
Query: 450 PVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKE 509
Q P P +A T ++R +E W RR + K+
Sbjct: 487 SPQPPSRQAEPP----------------KKEAATTGPQVKRADE---WKDPWRRSKSPKK 527
Query: 510 DRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPP 569
VS P A + +++ N R G
Sbjct: 528 KLGVSVS----------------PSRARRRRKTSASSASASNSSRSSSRSSSYSGSG--- 568
Query: 570 LISPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVF 629
S + + ++ + ++ S ++ R+ S S S P+ PS
Sbjct: 569 --SSRSRSRSSSYSSYSSRSSRHSSFSGSRSRSRSFSSSPS---PS-------------- 609
Query: 630 CPEKAEEGPRKREPAPLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQ 689
P P+ K +P PPP + G E P P P + K+T
Sbjct: 610 ------PTPSPHRPSIRTKGEPAPPPGKAG---EKSVKKPAPPPAPPQATKTT------- 653
Query: 690 RASLPQAATFGELSGPLKPGSPYRPPVPR------APDPAYIYDEFLQQRRRLVSKLDLE 743
A +P+ G+ + P R P R Y + R L
Sbjct: 654 -APVPEPTKPGDPREARRKERPARTPPRRRTLSGSGSGSGSSYSGSSSRSRSLSVSSVSS 712
Query: 744 ERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTT 803
+ + D +D Y ++ + + + + P T EK
Sbjct: 713 VSSATSSSSSAHSVDSEDMY-----ADLASPVSSASSRSPAPAQTRKEK----------G 757
Query: 804 QQQKEELVAQKRRKRRRMLR-ERSPSPPTIQSKRQTPS-PRLALSTRYSPDEMNNSPNFE 861
+ +KE+ V +++RKR + +S PP Q PS P+ A P +
Sbjct: 758 KSKKEDGVKEEKRKRDSSTQPPKSAKPPAGGKSSQQPSTPQQA-----PPGQPQQGTFVA 812
Query: 862 EKKKFLTIFNLTHISAEKRK----DKERL---------VEMLRAMKQKALSAAVADSLTN 908
K+ LT+ N +++ DK+R R + + +
Sbjct: 813 HKEIKLTLLNKAADKGSRKRYEPSDKDRQSPPPAKRPNTSPDRGSRDRKSGGRLGSPKPE 872
Query: 909 SPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP-KAAEPG--KLEQVRPQELSRVQE 965
R + + + PA ++ L + ++ ++ +P KA++PG + + LSR +E
Sbjct: 873 RQRGQNSKAPAAPADRKRQLSPQSK--SSSKVTSVPGKASDPGAASTKSGKASTLSRREE 930
Query: 966 L 966
L
Sbjct: 931 L 931
Score = 74.3 bits (181), Expect = 6e-13
Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 329 ERLQMDEELRRERERERERERERE-ADREREKEREREREKEREQEKER-EREKERERELE 386
ER + E +RERERERER+RERE RERE+ERE ER+KER++ KE ERE+ + E +
Sbjct: 405 ERERERENRQRERERERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEKD 464
Query: 387 RQREQRAREKE 397
RQ R REKE
Sbjct: 465 RQHRDRDREKE 475
Score = 60.8 bits (146), Expect = 7e-09
Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Query: 329 ERLQMDEELRREREREREREREREADREREKER-EREREKERE---QEKEREREKERERE 384
ER + E RR+RERERERE ER+ +R+R KE ERER K E Q ++R+REKERE+E
Sbjct: 420 ERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEKDRQHRDRDREKEREKE 479
Score = 58.9 bits (141), Expect = 3e-08
Identities = 86/392 (21%), Positives = 140/392 (35%), Gaps = 49/392 (12%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREA-DREREKERERERE-KEREQEKERERE 378
ER ER Q + E RE ER++ER+R +E +RER K E++R+ ++R++EKERE+E
Sbjct: 420 ERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEKDRQHRDRDREKEREKE 479
Query: 379 KERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAE 438
K + + Q R E A P E + + K ++P+RA
Sbjct: 480 KGKPKPRSPQPPSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRAR 539
Query: 439 KLKDAGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWL 498
+ + + + + S S G S S++ + R++ +
Sbjct: 540 RRRKTSASSASASN------SSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFS 593
Query: 499 ARQRRLR--QEKEDRQSQVSEFRQQVLEQHLDMGRP----------PVPAEAEHRPESTT 546
+ R R S R + + P P P A + TT
Sbjct: 594 GSRSRSRSFSSSPSPSPTPSPHRPSIRTKGEPAPPPGKAGEKSVKKPAPPPAPPQATKTT 653
Query: 547 RPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTALWNPVSLMDNTLETR-------- 598
P P +PG DP + P +P + + + + S ++ +R
Sbjct: 654 APVPEPTKPG--DPREARRKERPARTPPRRRTLSGSGSGSGSSYSGSSSRSRSLSVSSVS 711
Query: 599 -----RAESHSLHS-----------HPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKRE 642
+ S S HS P + SR A + E+ K E+G ++ +
Sbjct: 712 SVSSATSSSSSAHSVDSEDMYADLASPVSSASSRSPAPAQTRKEK--GKSKKEDGVKEEK 769
Query: 643 PAPLDKYQPP-PPPPREGGSLEHQPFLPGPGP 673
QPP P GG QP P P
Sbjct: 770 RKRDSSTQPPKSAKPPAGGKSSQQPSTPQQAP 801
Score = 58.5 bits (140), Expect = 4e-08
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 329 ERLQMDEELRREREREREREREREADREREKERER-EREKEREQEKEREREKERERELER 387
ER + + R R+RERERERE E D+ER++ +E ERE+ + EK+R+ ++R+RE ER
Sbjct: 418 ERERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEKDRQ-HRDRDREKER 476
Query: 388 QREQ 391
++E+
Sbjct: 477 EKEK 480
Score = 31.2 bits (69), Expect = 6.3
Identities = 78/390 (20%), Positives = 141/390 (36%), Gaps = 43/390 (11%)
Query: 731 QQRRRLVSKLDLEERRRREA--QEKGYYYDLDDSYDESDEEEVRAHLRCVAEQPPLKLDT 788
++ R + D E +RR+E +E+ + D + + D E+ R + + P
Sbjct: 433 EREREREHERDKERQRRKEEWERERAKRDEKDRQHRDRDREKEREKEK--GKPKPRSPQP 490
Query: 789 SSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRER------SPSPPTIQSKRQTPSPR 842
S + E + TT Q + K RR ++ SPS + K S
Sbjct: 491 PSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRARRRRKTSASSAS 550
Query: 843 LALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKERLVEMLRAMKQKALSAAV 902
+ S+R S + S + + + + ++ S R + R+ + ++ S++
Sbjct: 551 ASNSSRSSSRSSSYSGSGSSRSRSRSS---SYSSYSSRSSRHSSFSGSRS-RSRSFSSSP 606
Query: 903 ADSLTNSPRDSPAVSLSEPAT---QQASLDVEKPVGVAA------SLSDIPKAAEPGKLE 953
+ S T SP + EPA + V+KP A + + +P+ +PG
Sbjct: 607 SPSPTPSPHRPSIRTKGEPAPPPGKAGEKSVKKPAPPPAPPQATKTTAPVPEPTKPGDPR 666
Query: 954 QVRPQELS------RVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPLSHS 1007
+ R +E R SG + S + +SLS+ ++ + S S
Sbjct: 667 EARRKERPARTPPRRRTLSGSGSGSGSSYSGSSSRSRSLSV------SSVSSVSSATSSS 720
Query: 1008 TNGKSKPWEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSA--EQNHKVDTSVHYNI 1065
++ S E A+ + S +K KG E+ K D+S
Sbjct: 721 SSAHSVDSEDMYADLASPVSSASSRSPAPAQTRKEKGKSKKEDGVKEEKRKRDSSTQ--- 777
Query: 1066 PELQSSSRAPPPQHNGQQEPPTARKGPPTQ 1095
S PP Q+P T ++ PP Q
Sbjct: 778 ---PPKSAKPPAGGKSSQQPSTPQQAPPGQ 804
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 77.4 bits (189), Expect = 8e-14
Identities = 33/67 (49%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 390
+ D E RERE+ERE+E+ER +++R+KERE++REK++E+++EREREKE E++ ++++E
Sbjct: 392 EKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEK 451
Query: 391 QRAREKE 397
++ +EKE
Sbjct: 452 EQDKEKE 458
Score = 76.3 bits (186), Expect = 2e-13
Identities = 37/82 (45%), Positives = 62/82 (75%), Gaps = 4/82 (4%)
Query: 319 HSERMSGLSAERLQMDEELR---REREREREREREREADREREKEREREREKEREQEKER 375
HS + E+++ E ++ RE+ERERE+ERE+E +R + K+R++EREK+RE++KE+
Sbjct: 372 HSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEK 431
Query: 376 EREKERERELERQREQRAREKE 397
+RE+ERE+E E+ R+ + +EKE
Sbjct: 432 DREREREKEHEKDRD-KEKEKE 452
Score = 73.2 bits (178), Expect = 1e-12
Identities = 27/63 (42%), Positives = 53/63 (84%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 393
D + RE++RE+++E++RE +RE+E E++R++EKE+EQ+KE+EREK+R +E++ +R++
Sbjct: 416 DRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDK 475
Query: 394 REK 396
+ +
Sbjct: 476 KSR 478
Score = 70.1 bits (170), Expect = 1e-11
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 14/137 (10%)
Query: 308 PELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKERERE--- 364
P S R S ++ + E +E+ER +E++RE+E +RE+E+E+E+E
Sbjct: 354 PHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGK 413
Query: 365 ---REKEREQEKEREREKERERELERQREQ-RAREKELLAAKALEPSFLPVAELHGLRGH 420
R+KERE+++E+++EK+RERE E++ E+ R +EKE K E E+
Sbjct: 414 NKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEI------ 467
Query: 421 ATEERGKPSEQLTPTRA 437
E+R K + TP R+
Sbjct: 468 -DEKRKKDKKSRTPPRS 483
Score = 58.9 bits (141), Expect = 3e-08
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 378
H+ S R +R + RER + R R R++ K+ RE+ KE+E+ KE++RE
Sbjct: 338 HNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT-REKIKEKERVKEKDRE 396
Query: 379 KERERELERQRE-QRAREKE 397
KERERE ER++E +R + K+
Sbjct: 397 KEREREKEREKEKERGKNKD 416
Score = 57.0 bits (136), Expect = 1e-07
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 311 SHSSLAALHSERMSGLSAERLQM-DEELRREREREREREREREADREREKEREREREKER 369
SH+ + +R S + + E R+ R R R++ ++ RE+ KE+ER +EK+R
Sbjct: 337 SHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT-REKIKEKERVKEKDR 395
Query: 370 EQEKEREREKERERELERQREQ-RAREKE 397
E+E+ERE+E+E+E+E + +++ + REK+
Sbjct: 396 EKEREREKEREKEKERGKNKDRDKEREKD 424
Score = 53.5 bits (127), Expect = 1e-06
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKERERERE-KEREQEKERER 377
H R S R Q D + ++R + RER R R R++ ++ +E+ +EKER +
Sbjct: 333 HRSRSHNRSRSR-QKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVK 391
Query: 378 EKERERELERQREQRAREKE 397
EK+RE+E ER++E R +EKE
Sbjct: 392 EKDREKEREREKE-REKEKE 410
Score = 50.1 bits (118), Expect = 1e-05
Identities = 27/89 (30%), Positives = 39/89 (43%)
Query: 308 PELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREK 367
PE S+ R S R RR+R + + R R R R+K+R R +
Sbjct: 295 PESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSP 354
Query: 368 EREQEKEREREKERERELERQREQRAREK 396
+++ K RER K R R R + + REK
Sbjct: 355 HKKRSKSRERRKSRSRSHSRDKRKDTREK 383
Score = 47.0 bits (110), Expect = 1e-04
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE-- 376
HS R S R + R R R+++R R + ++R K RER + + R +++
Sbjct: 323 HSRRKRSQSKHRSRSHN---RSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKD 379
Query: 377 -REK--ERERELERQRE-QRAREKE 397
REK E+ER E+ RE +R REKE
Sbjct: 380 TREKIKEKERVKEKDREKEREREKE 404
Score = 38.5 bits (88), Expect = 0.039
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 20/84 (23%)
Query: 334 DEELRREREREREREREREADREREKE--------------------REREREKEREQEK 373
++E +++E+ERE++R +E D +R+K+ RER R + R +
Sbjct: 448 EKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSR 507
Query: 374 EREREKERERELERQREQRAREKE 397
K +R+ R R+R K+
Sbjct: 508 SPRTSKTIKRKSSRSPSPRSRNKK 531
Score = 37.7 bits (86), Expect = 0.067
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 339 REREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKE 397
R RER R R R + R + +R+ R +K+++RE ER RE+E
Sbjct: 491 RSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERE 549
Score = 34.7 bits (78), Expect = 0.57
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 341 REREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLA 400
RER R R R K +R+ + +++K+RE+E + E+R RE+
Sbjct: 495 RERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSM 554
Query: 401 AKA 403
K+
Sbjct: 555 RKS 557
Score = 33.1 bits (74), Expect = 1.7
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 305 RYPPELSHSSLAALHSER-----MSGLSAERLQMDEELRREREREREREREREADREREK 359
R PP ++S + S R S S+ + + ++R+ R + D++REK
Sbjct: 478 RTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREK 537
Query: 360 EREREREKEREQEKEREREKERERELERQREQRA---REKE 397
ER+ E+ + R+ +R+ + + E+ + +EKE
Sbjct: 538 ERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKE 578
Score = 32.3 bits (72), Expect = 2.8
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 314 SLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEK 373
S ++ S R S + R +++++RE+ER+ ER +ERER +
Sbjct: 502 SRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISER-RERERSTSMRKSSND 560
Query: 374 EREREKERERELERQREQRAREKELLAAKALEPSFLPVAE 413
+EK + + ++ +E + +K ++ P E
Sbjct: 561 RDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTE 600
Score = 31.2 bits (69), Expect = 6.3
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 330 RLQMDEELRRERERE---REREREREA-------DREREKEREREREKEREQEKEREREK 379
R + ++ +RE+ER+ RERER DR+ +++ E+ +E+E +E +
Sbjct: 526 RSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDS 585
Query: 380 ERERELERQREQRAREKEL 398
+E++ + R E ++
Sbjct: 586 SVSKEVDDKDAPRTEENKI 604
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 77.4 bits (189), Expect = 8e-14
Identities = 33/67 (49%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 390
+ D E RERE+ERE+E+ER +++R+KERE++REK++E+++EREREKE E++ ++++E
Sbjct: 276 EKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEK 335
Query: 391 QRAREKE 397
++ +EKE
Sbjct: 336 EQDKEKE 342
Score = 76.3 bits (186), Expect = 2e-13
Identities = 37/82 (45%), Positives = 62/82 (75%), Gaps = 4/82 (4%)
Query: 319 HSERMSGLSAERLQMDEELR---REREREREREREREADREREKEREREREKEREQEKER 375
HS + E+++ E ++ RE+ERERE+ERE+E +R + K+R++EREK+RE++KE+
Sbjct: 256 HSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEK 315
Query: 376 EREKERERELERQREQRAREKE 397
+RE+ERE+E E+ R+ + +EKE
Sbjct: 316 DREREREKEHEKDRD-KEKEKE 336
Score = 73.2 bits (178), Expect = 1e-12
Identities = 27/63 (42%), Positives = 53/63 (84%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 393
D + RE++RE+++E++RE +RE+E E++R++EKE+EQ+KE+EREK+R +E++ +R++
Sbjct: 300 DRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDK 359
Query: 394 REK 396
+ +
Sbjct: 360 KSR 362
Score = 70.1 bits (170), Expect = 1e-11
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 14/137 (10%)
Query: 308 PELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKERERE--- 364
P S R S ++ + E +E+ER +E++RE+E +RE+E+E+E+E
Sbjct: 238 PHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGK 297
Query: 365 ---REKEREQEKEREREKERERELERQREQ-RAREKELLAAKALEPSFLPVAELHGLRGH 420
R+KERE+++E+++EK+RERE E++ E+ R +EKE K E E+
Sbjct: 298 NKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEI------ 351
Query: 421 ATEERGKPSEQLTPTRA 437
E+R K + TP R+
Sbjct: 352 -DEKRKKDKKSRTPPRS 367
Score = 58.9 bits (141), Expect = 3e-08
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 378
H+ S R +R + RER + R R R++ K+ RE+ KE+E+ KE++RE
Sbjct: 222 HNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT-REKIKEKERVKEKDRE 280
Query: 379 KERERELERQRE-QRAREKE 397
KERERE ER++E +R + K+
Sbjct: 281 KEREREKEREKEKERGKNKD 300
Score = 57.0 bits (136), Expect = 1e-07
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 311 SHSSLAALHSERMSGLSAERLQM-DEELRREREREREREREREADREREKEREREREKER 369
SH+ + +R S + + E R+ R R R++ ++ RE+ KE+ER +EK+R
Sbjct: 221 SHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT-REKIKEKERVKEKDR 279
Query: 370 EQEKEREREKERERELERQREQ-RAREKE 397
E+E+ERE+E+E+E+E + +++ + REK+
Sbjct: 280 EKEREREKEREKEKERGKNKDRDKEREKD 308
Score = 53.5 bits (127), Expect = 1e-06
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKERERERE-KEREQEKERER 377
H R S R Q D + ++R + RER R R R++ ++ +E+ +EKER +
Sbjct: 217 HRSRSHNRSRSR-QKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVK 275
Query: 378 EKERERELERQREQRAREKE 397
EK+RE+E ER++E R +EKE
Sbjct: 276 EKDREKEREREKE-REKEKE 294
Score = 50.1 bits (118), Expect = 1e-05
Identities = 27/89 (30%), Positives = 39/89 (43%)
Query: 308 PELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREK 367
PE S+ R S R RR+R + + R R R R+K+R R +
Sbjct: 179 PESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSP 238
Query: 368 EREQEKEREREKERERELERQREQRAREK 396
+++ K RER K R R R + + REK
Sbjct: 239 HKKRSKSRERRKSRSRSHSRDKRKDTREK 267
Score = 47.0 bits (110), Expect = 1e-04
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE-- 376
HS R S R + R R R+++R R + ++R K RER + + R +++
Sbjct: 207 HSRRKRSQSKHRSRSHN---RSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKD 263
Query: 377 -REK--ERERELERQRE-QRAREKE 397
REK E+ER E+ RE +R REKE
Sbjct: 264 TREKIKEKERVKEKDREKEREREKE 288
Score = 38.5 bits (88), Expect = 0.039
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 20/84 (23%)
Query: 334 DEELRREREREREREREREADREREKE--------------------REREREKEREQEK 373
++E +++E+ERE++R +E D +R+K+ RER R + R +
Sbjct: 332 EKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSR 391
Query: 374 EREREKERERELERQREQRAREKE 397
K +R+ R R+R K+
Sbjct: 392 SPRTSKTIKRKSSRSPSPRSRNKK 415
Score = 37.7 bits (86), Expect = 0.067
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 339 REREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKE 397
R RER R R R + R + +R+ R +K+++RE ER RE+E
Sbjct: 375 RSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERE 433
Score = 34.7 bits (78), Expect = 0.57
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 341 REREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKELLA 400
RER R R R K +R+ + +++K+RE+E + E+R RE+
Sbjct: 379 RERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSM 438
Query: 401 AKA 403
K+
Sbjct: 439 RKS 441
Score = 33.1 bits (74), Expect = 1.7
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 305 RYPPELSHSSLAALHSER-----MSGLSAERLQMDEELRREREREREREREREADREREK 359
R PP ++S + S R S S+ + + ++R+ R + D++REK
Sbjct: 362 RTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREK 421
Query: 360 EREREREKEREQEKEREREKERERELERQREQRA---REKE 397
ER+ E+ + R+ +R+ + + E+ + +EKE
Sbjct: 422 ERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKE 462
Score = 32.3 bits (72), Expect = 2.8
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 314 SLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEK 373
S ++ S R S + R +++++RE+ER+ ER +ERER +
Sbjct: 386 SRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISER-RERERSTSMRKSSND 444
Query: 374 EREREKERERELERQREQRAREKELLAAKALEPSFLPVAE 413
+EK + + ++ +E + +K ++ P E
Sbjct: 445 RDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTE 484
Score = 31.2 bits (69), Expect = 6.3
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 330 RLQMDEELRRERERE---REREREREA-------DREREKEREREREKEREQEKEREREK 379
R + ++ +RE+ER+ RERER DR+ +++ E+ +E+E +E +
Sbjct: 410 RSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDS 469
Query: 380 ERERELERQREQRAREKEL 398
+E++ + R E ++
Sbjct: 470 SVSKEVDDKDAPRTEENKI 488
>gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens]
Length = 520
Score = 77.0 bits (188), Expect = 1e-13
Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 45/240 (18%)
Query: 252 PSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSLPP-LHPSAMHLHLSGV--RYPP 308
P++L P PF P + + L + P +P P PG+ PP L P+ H SG R
Sbjct: 292 PTHLPPPPFLPPPPTVSTAPPL--IPPPGFP-PPPGAPPPSLIPTIESGHSSGYDSRSAR 348
Query: 309 ELSHSSLAALH----SERMSGLSAERLQMDEELRREREREREREREREADREREKERERE 364
+ ++A H + L Q D RRE++R+RER+R+RE DR+R++ERER
Sbjct: 349 AFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDRERDRDRDRERERT 408
Query: 365 REKEREQ-----------EKEREREKE------------RERELERQREQRAREKELLAA 401
RE+ERE+ ++ER R +E RE+E ER RE+R REKE
Sbjct: 409 RERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE-ERHRERRHREKEETRH 467
Query: 402 KALEPSFLPVAELHGLRGHATEE--RGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVP 459
K+ + + R H +EE + + R+++ K+AG + P P Q P
Sbjct: 468 KS--------SRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSE-PAPEQESTEATP 518
>gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens]
Length = 594
Score = 77.0 bits (188), Expect = 1e-13
Identities = 76/240 (31%), Positives = 114/240 (47%), Gaps = 45/240 (18%)
Query: 252 PSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSLPP-LHPSAMHLHLSGV--RYPP 308
P++L P PF P + + L + P +P P PG+ PP L P+ H SG R
Sbjct: 366 PTHLPPPPFLPPPPTVSTAPPL--IPPPGFP-PPPGAPPPSLIPTIESGHSSGYDSRSAR 422
Query: 309 ELSHSSLAALH----SERMSGLSAERLQMDEELRREREREREREREREADREREKERERE 364
+ ++A H + L Q D RRE++R+RER+R+RE DR+R++ERER
Sbjct: 423 AFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDRERDRDRDRERERT 482
Query: 365 REKEREQ-----------EKEREREKE------------RERELERQREQRAREKELLAA 401
RE+ERE+ ++ER R +E RE+E ER RE+R REKE
Sbjct: 483 RERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE-ERHRERRHREKEETRH 541
Query: 402 KALEPSFLPVAELHGLRGHATEE--RGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVP 459
K+ + + R H +EE + + R+++ K+AG + P P Q P
Sbjct: 542 KS--------SRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSE-PAPEQESTEATP 592
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 76.6 bits (187), Expect = 1e-13
Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 9/73 (12%)
Query: 334 DEELRREREREREREREREADREREKEREREREKER--------EQEKEREREKEREREL 385
+ E ++ RERER+R RERE DR+REKERER+ EK+R E+E++REREK++ERE
Sbjct: 126 EREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERET 185
Query: 386 ERQRE-QRAREKE 397
ER R+ QR EKE
Sbjct: 186 ERDRDRQRDTEKE 198
Score = 76.3 bits (186), Expect = 2e-13
Identities = 35/62 (56%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Query: 336 ELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRARE 395
E+ R+RERE+++ RERE DR RE+ER+R+REKERE++ E++R+ +RE E ER+R+ R RE
Sbjct: 120 EIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERD-RERE 178
Query: 396 KE 397
K+
Sbjct: 179 KQ 180
Score = 74.7 bits (182), Expect = 5e-13
Identities = 57/156 (36%), Positives = 78/156 (50%), Gaps = 40/156 (25%)
Query: 282 PIPTPGSLPPLHPSAMHLHLS------GVRYPPELSHSSLAALHSERMSGLSA------- 328
P+ T L P A HLH S V P + S L + S R GL
Sbjct: 15 PVKTSPLLVPSLTYAPHLHSSLGTLWVEVTIPLDFSRGRLGSQESPRSWGLGQAHKDADG 74
Query: 329 -----ERLQMDEELRRERERERERERER-------------------EADREREKE--RE 362
ER ++ E+ +ER+R+R+R+RER E DREREK+ RE
Sbjct: 75 DDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRE 134
Query: 363 REREKEREQEKEREREKERERELERQRE-QRAREKE 397
RER++ RE+E++R+REKERER+ E+ R+ QR E E
Sbjct: 135 RERDRGRERERDRDREKERERQTEKDRDGQRETETE 170
Score = 71.6 bits (174), Expect = 4e-12
Identities = 36/81 (44%), Positives = 58/81 (71%), Gaps = 4/81 (4%)
Query: 321 ERMSGLSAERLQMDEELR---REREREREREREREADREREKEREREREKEREQEKERER 377
E+ G ER + E R RE+ERER+ E++R+ RE E ERER+RE+E+++E+E ER
Sbjct: 128 EKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETER 187
Query: 378 EKERERELERQRE-QRAREKE 397
+++R+R+ E++RE Q RE++
Sbjct: 188 DRDRQRDTEKERERQTDRERD 208
Score = 71.2 bits (173), Expect = 5e-12
Identities = 37/69 (53%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKER--EREKERERELERQR 389
Q + E RERE+++ RERER+ RERE++R+RE+E+ER+ EK+R +RE E ERE +R+R
Sbjct: 118 QTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDRER 177
Query: 390 E-QRAREKE 397
E Q+ RE E
Sbjct: 178 EKQKERETE 186
Score = 71.2 bits (173), Expect = 5e-12
Identities = 29/58 (50%), Positives = 50/58 (86%)
Query: 340 EREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKE 397
ER+RE +RE ERE DR RE++R+R+R KER++E++R+ E+++ER+ ER++E++ ++KE
Sbjct: 216 ERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKE 273
Score = 69.7 bits (169), Expect = 2e-11
Identities = 30/75 (40%), Positives = 54/75 (72%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 391
+ E RE ERE +R RER+ DR+R KER+RER+++ E++KER++E+++ER+ +++ E+
Sbjct: 216 ERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEK 275
Query: 392 RAREKELLAAKALEP 406
R +K+ + + P
Sbjct: 276 RREDKKRKWGEGISP 290
Score = 69.3 bits (168), Expect = 2e-11
Identities = 31/63 (49%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 336 ELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE-QRAR 394
E ERER+RERE+++E + ER+++R+R+ EKERE++ +RER+++R+ + ERQRE R
Sbjct: 166 ETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREG 225
Query: 395 EKE 397
E+E
Sbjct: 226 ERE 228
Score = 67.4 bits (163), Expect = 8e-11
Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 7/80 (8%)
Query: 321 ERMSGLSAERLQMDEELRRERERERER------EREREADREREKEREREREKEREQEKE 374
ER G ER D E RER+ E++R E ERE DREREK++ERE E++R+++++
Sbjct: 136 ERDRGRERER-DRDREKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRD 194
Query: 375 REREKERERELERQREQRAR 394
E+E+ER+ + ER R+++ +
Sbjct: 195 TEKERERQTDRERDRQRKTQ 214
Score = 65.5 bits (158), Expect = 3e-10
Identities = 29/69 (42%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 390
+ + E R+R+R+ E+ERER+ DRER+++R+ + E++RE ++E ERE +R RE +R R+
Sbjct: 182 ERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDRDR 241
Query: 391 --QRAREKE 397
+R RE++
Sbjct: 242 GKERDRERD 250
Score = 65.1 bits (157), Expect = 4e-10
Identities = 27/66 (40%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 391
+ D E +++ERE ER+R+R+ D E+E+ER+ +RE++R+++ + ER++E +RE ER+ ++
Sbjct: 172 ERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDR 231
Query: 392 RAREKE 397
R RE++
Sbjct: 232 R-RERQ 236
Score = 64.7 bits (156), Expect = 5e-10
Identities = 28/67 (41%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQ 391
Q + E R+R+R+R+ E+ERE +RE++R+R+ + ER++E +RE E+E +R ERQR++
Sbjct: 180 QKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRDR 239
Query: 392 -RAREKE 397
R +E++
Sbjct: 240 DRGKERD 246
Score = 63.9 bits (154), Expect = 9e-10
Identities = 27/67 (40%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 330 RLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERE-LERQ 388
+ Q + + +RE ERE +R RE R+R++ +ER+RE++R++E+++ER+KER++E E++
Sbjct: 212 KTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKK 271
Query: 389 REQRARE 395
+E++ RE
Sbjct: 272 KEEKRRE 278
Score = 62.4 bits (150), Expect = 3e-09
Identities = 30/72 (41%), Positives = 52/72 (72%), Gaps = 7/72 (9%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQ------EKEREREKEREREL 385
+ + + RE+++ERE ER+R+ R+ EKERER+ ++ER++ E++RE ++E ERE
Sbjct: 170 ERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERET 229
Query: 386 ERQRE-QRAREK 396
+R+RE QR R++
Sbjct: 230 DRRRERQRDRDR 241
Score = 50.8 bits (120), Expect = 8e-06
Identities = 21/52 (40%), Positives = 39/52 (75%)
Query: 330 RLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKER 381
R + + R +ER+RER+R+ E +ER+KER++ER++++++EK RE +K +
Sbjct: 232 RRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRK 283
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 75.5 bits (184), Expect = 3e-13
Identities = 152/643 (23%), Positives = 216/643 (33%), Gaps = 119/643 (18%)
Query: 22 TTATVNPLTPS----PLNGALVPSGSPATSSALSAQAAPSSSFAAALRKLAKQAEEPRGS 77
T + P PS PL+G P + L P F L A Q + P G+
Sbjct: 276 TGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFG--LPPQASQGQAPLGT 333
Query: 78 SLS------SESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPSTPPVVTIAPTKT 131
S + S P S A P P+ P+ P P P + PT
Sbjct: 334 SPAAAYPHTSLQLPASQSALQSQQP---PREQPLPP---------APLAMPHIKPPPTTP 381
Query: 132 VNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGPAIPSHLLST-PYPFGLSPSS- 189
+ + ++ + S PP P K H S P P L P S
Sbjct: 382 IPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 441
Query: 190 -----------VVQDSRFPPLNLQRP---VHHVVP-PSTVTEDYLRSFRPYHTTDDLRMS 234
+ Q PP P +H V P P ++ P T +
Sbjct: 442 PLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPST 501
Query: 235 SLPPLG-----LDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSL 289
S PP G P + AA S P P ++ + L P P P P S
Sbjct: 502 STPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEE-ALDDAEEPESPPPPPRSP 560
Query: 290 PPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERER 349
P P+ V P S S+ H +R A L + ++ E
Sbjct: 561 SP-EPTV-------VDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEA 612
Query: 350 EREADREREKEREREREKEREQEKEREREKERERELER-------QREQRAREKELLAAK 402
+A RE E++ ERE+E+E+EKERERE+ERERE ER E R + +L
Sbjct: 613 IEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPG 672
Query: 403 ALEPSFLP----VAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPV 458
+ PSF P +A + G T SE P + +P HP +
Sbjct: 673 HMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARP---------HVMSPTNRNHPFY-- 721
Query: 459 PTPHHTVPSLISNH--GIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVS 516
P + L++ H G++++ + R+R LR +R+ +
Sbjct: 722 -MPLNPTDPLLAYHMPGLYNVDPT------------------IRERELR----EREIRER 758
Query: 517 EFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQ 576
E R++ L + + G P E + P N P +HF L P P
Sbjct: 759 EIRERELRERMKPGFEVKPPELD-----PLHPAAN--------PMEHFARHSALTIP-PT 804
Query: 577 LHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAA 619
P A ++P N LE R P P R AA
Sbjct: 805 AGPHPFASFHPGL---NPLERERLALAGPQLRPEMSYPDRLAA 844
Score = 43.5 bits (101), Expect = 0.001
Identities = 95/421 (22%), Positives = 134/421 (31%), Gaps = 85/421 (20%)
Query: 447 APKPVQHPLHPV--PTPHHTVPSLISNHG----IFSLPSSSAATALLIQRTNEEEKWLAR 500
AP Q PLH P PH + H F LP ++ + T+ +
Sbjct: 284 APSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG-TSPAAAYPHT 342
Query: 501 QRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDP 560
+L + QSQ Q EQ L PP P H T P P P
Sbjct: 343 SLQLPASQSALQSQ-----QPPREQPL----PPAPLAMPHIKPPPTTPIPQLPAPQAHKH 393
Query: 561 PQHFGGPPPL-----ISPKPQL--------HAAPTALWNPVSLMDNTLETRRAESHSLHS 607
P H GP P + P P L H P+A P+ LM +S L S
Sbjct: 394 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM--------PQSQPLPS 445
Query: 608 HPA---AFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPPPPREGGSLEH 664
PA S+ P + A + P + P PPP P S
Sbjct: 446 SPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQH--PFVPGGPPPITPPTCPSTST 503
Query: 665 QPFLPGPG--PFLAELEKSTQTILGQQRASLPQAATFGE-LSGPLKPGSPYRPPVPRAPD 721
P PG P + S +I G LP E L +P SP PP PR+P
Sbjct: 504 PPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESP--PPPPRSPS 561
Query: 722 PAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQ 781
P + + + +Q +Y LD Y+ +
Sbjct: 562 P----------------EPTVVDTPSHASQSARFYKHLDRGYNSCARTD----------- 594
Query: 782 PPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPSP 841
L F+ L G +++EE + + +R+ + RE + +R+
Sbjct: 595 -----------LYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERE 643
Query: 842 R 842
R
Sbjct: 644 R 644
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 75.5 bits (184), Expect = 3e-13
Identities = 152/643 (23%), Positives = 216/643 (33%), Gaps = 119/643 (18%)
Query: 22 TTATVNPLTPS----PLNGALVPSGSPATSSALSAQAAPSSSFAAALRKLAKQAEEPRGS 77
T + P PS PL+G P + L P F L A Q + P G+
Sbjct: 830 TGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFG--LPPQASQGQAPLGT 887
Query: 78 SLS------SESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPSTPPVVTIAPTKT 131
S + S P S A P P+ P+ P P P + PT
Sbjct: 888 SPAAAYPHTSLQLPASQSALQSQQP---PREQPLPP---------APLAMPHIKPPPTTP 935
Query: 132 VNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGPAIPSHLLST-PYPFGLSPSS- 189
+ + ++ + S PP P K H S P P L P S
Sbjct: 936 IPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 995
Query: 190 -----------VVQDSRFPPLNLQRP---VHHVVP-PSTVTEDYLRSFRPYHTTDDLRMS 234
+ Q PP P +H V P P ++ P T +
Sbjct: 996 PLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPST 1055
Query: 235 SLPPLG-----LDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSL 289
S PP G P + AA S P P ++ + L P P P P S
Sbjct: 1056 STPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEE-ALDDAEEPESPPPPPRSP 1114
Query: 290 PPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERER 349
P P+ V P S S+ H +R A L + ++ E
Sbjct: 1115 SP-EPTV-------VDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEA 1166
Query: 350 EREADREREKEREREREKEREQEKEREREKERERELER-------QREQRAREKELLAAK 402
+A RE E++ ERE+E+E+EKERERE+ERERE ER E R + +L
Sbjct: 1167 IEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPG 1226
Query: 403 ALEPSFLP----VAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPV 458
+ PSF P +A + G T SE P + +P HP +
Sbjct: 1227 HMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARP---------HVMSPTNRNHPFY-- 1275
Query: 459 PTPHHTVPSLISNH--GIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVS 516
P + L++ H G++++ + R+R LR +R+ +
Sbjct: 1276 -MPLNPTDPLLAYHMPGLYNVDPT------------------IRERELR----EREIRER 1312
Query: 517 EFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQ 576
E R++ L + + G P E + P N P +HF L P P
Sbjct: 1313 EIRERELRERMKPGFEVKPPELD-----PLHPAAN--------PMEHFARHSALTIP-PT 1358
Query: 577 LHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAA 619
P A ++P N LE R P P R AA
Sbjct: 1359 AGPHPFASFHPGL---NPLERERLALAGPQLRPEMSYPDRLAA 1398
Score = 43.5 bits (101), Expect = 0.001
Identities = 95/421 (22%), Positives = 134/421 (31%), Gaps = 85/421 (20%)
Query: 447 APKPVQHPLHPV--PTPHHTVPSLISNHG----IFSLPSSSAATALLIQRTNEEEKWLAR 500
AP Q PLH P PH + H F LP ++ + T+ +
Sbjct: 838 APSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG-TSPAAAYPHT 896
Query: 501 QRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDP 560
+L + QSQ Q EQ L PP P H T P P P
Sbjct: 897 SLQLPASQSALQSQ-----QPPREQPL----PPAPLAMPHIKPPPTTPIPQLPAPQAHKH 947
Query: 561 PQHFGGPPPL-----ISPKPQL--------HAAPTALWNPVSLMDNTLETRRAESHSLHS 607
P H GP P + P P L H P+A P+ LM +S L S
Sbjct: 948 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM--------PQSQPLPS 999
Query: 608 HPA---AFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPPPPREGGSLEH 664
PA S+ P + A + P + P PPP P S
Sbjct: 1000 SPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQH--PFVPGGPPPITPPTCPSTST 1057
Query: 665 QPFLPGPG--PFLAELEKSTQTILGQQRASLPQAATFGE-LSGPLKPGSPYRPPVPRAPD 721
P PG P + S +I G LP E L +P SP PP PR+P
Sbjct: 1058 PPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESP--PPPPRSPS 1115
Query: 722 PAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQ 781
P + + + +Q +Y LD Y+ +
Sbjct: 1116 P----------------EPTVVDTPSHASQSARFYKHLDRGYNSCARTD----------- 1148
Query: 782 PPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPSP 841
L F+ L G +++EE + + +R+ + RE + +R+
Sbjct: 1149 -----------LYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERE 1197
Query: 842 R 842
R
Sbjct: 1198 R 1198
Score = 38.5 bits (88), Expect = 0.039
Identities = 15/37 (40%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Query: 353 ADREREKEREREREKEREQEKEREREKERERELERQR 389
AD++++K++E++R+++R++E+E+ R+K RE E R R
Sbjct: 3 ADKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38
Score = 37.7 bits (86), Expect = 0.067
Identities = 14/36 (38%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 342 EREREREREREADREREKEREREREKEREQEKERER 377
++++++++E++ DR+R++ERE+ R+K RE E R R
Sbjct: 4 DKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38
Score = 37.4 bits (85), Expect = 0.088
Identities = 14/37 (37%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Query: 358 EKEREREREKEREQEKEREREK-ERERELERQREQRA 393
+K++++++EK+R+++++REREK ++ RE E R +R+
Sbjct: 4 DKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRS 40
Score = 35.8 bits (81), Expect = 0.26
Identities = 13/36 (36%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 348 EREREADREREKEREREREKEREQEKEREREKERER 383
+++++ D+E++++R+R+RE+E+ ++K RE E R R
Sbjct: 4 DKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38
Score = 34.7 bits (78), Expect = 0.57
Identities = 10/30 (33%), Positives = 26/30 (86%)
Query: 368 EREQEKEREREKERERELERQREQRAREKE 397
+++++K++E++++R+R+ ER++ +ARE E
Sbjct: 4 DKDKDKDKEKDRDRDRDREREKRDKARESE 33
Score = 34.3 bits (77), Expect = 0.74
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 334 DEELRRERERERERERERE-ADREREKERERER-------------EKEREQEKEREREK 379
D++ +E++R+R+R+RERE D+ RE E R R E + ++++ +
Sbjct: 6 DKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDEDNDNNS 65
Query: 380 ERERELERQREQRAREKE 397
E ++ +++ +K+
Sbjct: 66 ATAEESTKKNKKKPPKKK 83
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 75.5 bits (184), Expect = 3e-13
Identities = 152/643 (23%), Positives = 216/643 (33%), Gaps = 119/643 (18%)
Query: 22 TTATVNPLTPS----PLNGALVPSGSPATSSALSAQAAPSSSFAAALRKLAKQAEEPRGS 77
T + P PS PL+G P + L P F L A Q + P G+
Sbjct: 830 TGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFG--LPPQASQGQAPLGT 887
Query: 78 SLS------SESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPSTPPVVTIAPTKT 131
S + S P S A P P+ P+ P P P + PT
Sbjct: 888 SPAAAYPHTSLQLPASQSALQSQQP---PREQPLPP---------APLAMPHIKPPPTTP 935
Query: 132 VNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGPAIPSHLLST-PYPFGLSPSS- 189
+ + ++ + S PP P K H S P P L P S
Sbjct: 936 IPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 995
Query: 190 -----------VVQDSRFPPLNLQRP---VHHVVP-PSTVTEDYLRSFRPYHTTDDLRMS 234
+ Q PP P +H V P P ++ P T +
Sbjct: 996 PLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPST 1055
Query: 235 SLPPLG-----LDPATAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSL 289
S PP G P + AA S P P ++ + L P P P P S
Sbjct: 1056 STPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEE-ALDDAEEPESPPPPPRSP 1114
Query: 290 PPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERER 349
P P+ V P S S+ H +R A L + ++ E
Sbjct: 1115 SP-EPTV-------VDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEA 1166
Query: 350 EREADREREKEREREREKEREQEKEREREKERERELER-------QREQRAREKELLAAK 402
+A RE E++ ERE+E+E+EKERERE+ERERE ER E R + +L
Sbjct: 1167 IEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPG 1226
Query: 403 ALEPSFLP----VAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPV 458
+ PSF P +A + G T SE P + +P HP +
Sbjct: 1227 HMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARP---------HVMSPTNRNHPFY-- 1275
Query: 459 PTPHHTVPSLISNH--GIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVS 516
P + L++ H G++++ + R+R LR +R+ +
Sbjct: 1276 -MPLNPTDPLLAYHMPGLYNVDPT------------------IRERELR----EREIRER 1312
Query: 517 EFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQ 576
E R++ L + + G P E + P N P +HF L P P
Sbjct: 1313 EIRERELRERMKPGFEVKPPELD-----PLHPAAN--------PMEHFARHSALTIP-PT 1358
Query: 577 LHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAA 619
P A ++P N LE R P P R AA
Sbjct: 1359 AGPHPFASFHPGL---NPLERERLALAGPQLRPEMSYPDRLAA 1398
Score = 43.5 bits (101), Expect = 0.001
Identities = 95/421 (22%), Positives = 134/421 (31%), Gaps = 85/421 (20%)
Query: 447 APKPVQHPLHPV--PTPHHTVPSLISNHG----IFSLPSSSAATALLIQRTNEEEKWLAR 500
AP Q PLH P PH + H F LP ++ + T+ +
Sbjct: 838 APSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG-TSPAAAYPHT 896
Query: 501 QRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDP 560
+L + QSQ Q EQ L PP P H T P P P
Sbjct: 897 SLQLPASQSALQSQ-----QPPREQPL----PPAPLAMPHIKPPPTTPIPQLPAPQAHKH 947
Query: 561 PQHFGGPPPL-----ISPKPQL--------HAAPTALWNPVSLMDNTLETRRAESHSLHS 607
P H GP P + P P L H P+A P+ LM +S L S
Sbjct: 948 PPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM--------PQSQPLPS 999
Query: 608 HPA---AFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPPPPREGGSLEH 664
PA S+ P + A + P + P PPP P S
Sbjct: 1000 SPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQH--PFVPGGPPPITPPTCPSTST 1057
Query: 665 QPFLPGPG--PFLAELEKSTQTILGQQRASLPQAATFGE-LSGPLKPGSPYRPPVPRAPD 721
P PG P + S +I G LP E L +P SP PP PR+P
Sbjct: 1058 PPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESP--PPPPRSPS 1115
Query: 722 PAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQ 781
P + + + +Q +Y LD Y+ +
Sbjct: 1116 P----------------EPTVVDTPSHASQSARFYKHLDRGYNSCARTD----------- 1148
Query: 782 PPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPSP 841
L F+ L G +++EE + + +R+ + RE + +R+
Sbjct: 1149 -----------LYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERE 1197
Query: 842 R 842
R
Sbjct: 1198 R 1198
Score = 38.5 bits (88), Expect = 0.039
Identities = 15/37 (40%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Query: 353 ADREREKEREREREKEREQEKEREREKERERELERQR 389
AD++++K++E++R+++R++E+E+ R+K RE E R R
Sbjct: 3 ADKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38
Score = 37.7 bits (86), Expect = 0.067
Identities = 14/36 (38%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 342 EREREREREREADREREKEREREREKEREQEKERER 377
++++++++E++ DR+R++ERE+ R+K RE E R R
Sbjct: 4 DKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38
Score = 37.4 bits (85), Expect = 0.088
Identities = 14/37 (37%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Query: 358 EKEREREREKEREQEKEREREK-ERERELERQREQRA 393
+K++++++EK+R+++++REREK ++ RE E R +R+
Sbjct: 4 DKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRS 40
Score = 35.8 bits (81), Expect = 0.26
Identities = 13/36 (36%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 348 EREREADREREKEREREREKEREQEKEREREKERER 383
+++++ D+E++++R+R+RE+E+ ++K RE E R R
Sbjct: 4 DKDKDKDKEKDRDRDRDREREK-RDKARESENSRPR 38
Score = 34.7 bits (78), Expect = 0.57
Identities = 10/30 (33%), Positives = 26/30 (86%)
Query: 368 EREQEKEREREKERERELERQREQRAREKE 397
+++++K++E++++R+R+ ER++ +ARE E
Sbjct: 4 DKDKDKDKEKDRDRDRDREREKRDKARESE 33
Score = 34.3 bits (77), Expect = 0.74
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 334 DEELRRERERERERERERE-ADREREKERERER-------------EKEREQEKEREREK 379
D++ +E++R+R+R+RERE D+ RE E R R E + ++++ +
Sbjct: 6 DKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDEDNDNNS 65
Query: 380 ERERELERQREQRAREKE 397
E ++ +++ +K+
Sbjct: 66 ATAEESTKKNKKKPPKKK 83
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 74.3 bits (181), Expect = 6e-13
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 15/82 (18%)
Query: 332 QMDEELRRERERERERE----------REREADREREKEREREREKERE----QEKERER 377
Q D E RER+R+RERE RERE DR+R++E ERER+KERE E +RER
Sbjct: 49 QRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRER 108
Query: 378 EKERERELERQRE-QRAREKEL 398
+K++ERE+ER R+ +R ++KE+
Sbjct: 109 QKQKEREMERVRDREREKQKEM 130
Score = 73.2 bits (178), Expect = 1e-12
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 14/126 (11%)
Query: 321 ERMSGLSAERLQMDEELR-REREREREREREREADREREKEREREREKEREQEKEREREK 379
E+ + ER + E R R+RE ERER++ERE DR E +RER+++KERE E+ R+RE+
Sbjct: 65 EKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDRER 124
Query: 380 ERERELERQRE---QRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTR 436
E+++E+ R+R+ + RE+E A + E R TE+R + E+
Sbjct: 125 EKQKEMGRERQTDRETDRERERQAERERETG----------RERKTEDRHRERERERKRE 174
Query: 437 AEKLKD 442
E+ ++
Sbjct: 175 RERKRE 180
Score = 72.8 bits (177), Expect = 2e-12
Identities = 32/71 (45%), Positives = 52/71 (73%)
Query: 320 SERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREK 379
++R + E D R+R+R+RER RER+ DREREK+ +RE E++RE+E++R+R++
Sbjct: 27 TDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRERERDRDRQR 86
Query: 380 ERERELERQRE 390
E ERE +++RE
Sbjct: 87 ETERERDKERE 97
Score = 72.4 bits (176), Expect = 2e-12
Identities = 33/67 (49%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 332 QMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQRE- 390
+ D + RER RER+R+RERE +RE ER+RERE++R++++E ERE+++ERE +R E
Sbjct: 45 ERDRQRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETERERDKERETDRHTET 104
Query: 391 QRAREKE 397
R R+K+
Sbjct: 105 DRERQKQ 111
Score = 71.2 bits (173), Expect = 5e-12
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
ER ER + E +R ER+R+R+RE +RER+++RERE++ +RE E++RERE++
Sbjct: 22 ERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRERERD 81
Query: 381 RERELERQREQRAREKE 397
R+R+ E +RE R +E+E
Sbjct: 82 RDRQRETERE-RDKERE 97
Score = 71.2 bits (173), Expect = 5e-12
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 12/88 (13%)
Query: 321 ERMSGLSAERLQMDEELRRERERERERERE-----READREREKEREREREKEREQE-KE 374
E+ + ER Q D E RERER+ ERERE + DR RE+ERER+RE+ER++E KE
Sbjct: 125 EKQKEMGRER-QTDRETDRERERQAERERETGRERKTEDRHRERERERKRERERKRETKE 183
Query: 375 RER----EKERERELERQRE-QRAREKE 397
RER E+ER+RE +R+R+ QR E+E
Sbjct: 184 RERHTDMERERQRETDRKRDRQRESERE 211
Score = 69.7 bits (169), Expect = 2e-11
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 7/85 (8%)
Query: 321 ERMSGLSAERLQMDEELRRERERERE----REREREADREREKEREREREKEREQEKERE 376
+R E + + +R+RER RE RERE++ DRE E++RERER+++R++E ERE
Sbjct: 32 DRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETERE 91
Query: 377 REKERE--RELERQRE-QRAREKEL 398
R+KERE R E RE Q+ +E+E+
Sbjct: 92 RDKERETDRHTETDRERQKQKEREM 116
Score = 68.9 bits (167), Expect = 3e-11
Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
Query: 332 QMDEELRRERERERERE----REREADREREKEREREREKEREQEKER---EREKERERE 384
Q + E+ R R+RERE++ RER+ DRE ++ERER+ E+ERE +ER +R +ERERE
Sbjct: 111 QKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRHRERERE 170
Query: 385 LERQREQRAREKE 397
+R+RE++ KE
Sbjct: 171 RKRERERKRETKE 183
Score = 67.8 bits (164), Expect = 6e-11
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 14/89 (15%)
Query: 322 RMSGLSAERLQMDEELRRERERER-------------EREREREADREREKEREREREKE 368
R + E + E RRE +RER ER+R+R+ +R RE++R+REREK+
Sbjct: 8 RHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQ 67
Query: 369 REQEKEREREKERERELERQREQRAREKE 397
++E ER+RE+ER+R+ +R+ E R R+KE
Sbjct: 68 TDREGERQRERERDRDRQRETE-RERDKE 95
Score = 67.0 bits (162), Expect = 1e-10
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQE-----KEREREKERERELERQ 388
D E +++E RER+ +RE DRERE++ ERERE RE++ +ERERE++RERE +R+
Sbjct: 121 DREREKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRHRERERERKRERERKRE 180
Query: 389 REQRAREKEL 398
++R R ++
Sbjct: 181 TKERERHTDM 190
Score = 65.9 bits (159), Expect = 2e-10
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADRERE-KEREREREKEREQEKEREREK 379
ER ER E +R RERERER+RE +R+RE KERER + ERE+++E +R++
Sbjct: 143 ERERQAERERETGRERKTEDRHRERERERKRERERKRETKERERHTDMERERQRETDRKR 202
Query: 380 ERERELERQRE 390
+R+RE ER+R+
Sbjct: 203 DRQRESERERD 213
Score = 64.3 bits (155), Expect = 7e-10
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 320 SERMSGLSAERLQMDEELRREREREREREREREA-DREREKEREREREKEREQEKERERE 378
+ER ER D RERER+RERER+RE +RER + ERER++E +++++R+RE
Sbjct: 148 AERERETGRERKTEDRHRERERERKRERERKRETKERERHTDMERERQRETDRKRDRQRE 207
Query: 379 KERERE 384
ERER+
Sbjct: 208 SERERD 213
Score = 50.1 bits (118), Expect = 1e-05
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 12/79 (15%)
Query: 331 LQMDEELRREREREREREREREADREREKERER-----------EREKEREQEKEREREK 379
++ E R +R+RE RE ++ER+R ER+++R++E+ RER++
Sbjct: 1 MESKTEGRHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDR 60
Query: 380 ERERELERQRE-QRAREKE 397
+RERE + RE +R RE+E
Sbjct: 61 DREREKQTDREGERQRERE 79
Score = 48.5 bits (114), Expect = 4e-05
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKE 368
H ER ER + E RER + ERER+RE DR+R+++RE ERE++
Sbjct: 164 HRERERERKRERERKRETKERERHTDMERERQRETDRKRDRQRESERERD 213
Score = 34.7 bits (78), Expect = 0.57
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 1082 QQEPPTARKGPPTQELDRDSE---------EEEEEDDEDGEDEEEVPKRKWQGIEAVFEA 1132
++E T R+G +E +RD + ++E E D E + E K+K + +E V +
Sbjct: 63 EREKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDR 122
Query: 1133 YQEHIEEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERER 1188
+E +E ERQ + R E + AE+ + E +++ + ERER
Sbjct: 123 EREKQKEMGRERQTDRETDRERERQ-------AERERETGRERKTEDRHRERERER 171
Score = 34.3 bits (77), Expect = 0.74
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 1078 QHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHI 1137
Q ++E R+ E DR+ ++++E + E D E K+K G E + +
Sbjct: 85 QRETERERDKERETDRHTETDRERQKQKEREMERVRDRER-EKQKEMGRERQTDRETDRE 143
Query: 1138 EEQNLERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERERLQAELDHLR 1197
E+ ER+ + R+ E RH ++ E + +++ ERER Q E D R
Sbjct: 144 RERQAERERETGRERKTEDRHRERERERKRERERKRETKERERHTDMERER-QRETDRKR 202
>gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens]
Length = 588
Score = 74.3 bits (181), Expect = 6e-13
Identities = 77/248 (31%), Positives = 114/248 (45%), Gaps = 52/248 (20%)
Query: 252 PSYLAPHPFPHPAFRMDDSYCLSALRSPFYPI--------PTPGSLPP-LHPSAMHLHLS 302
P++L P PF P + + L + P PI P PG+ PP L P+ H S
Sbjct: 351 PTHLPPPPFLPPPPTVSTAPPL--IPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSS 408
Query: 303 GV--RYPPELSHSSLAALH----SERMSGLSAERLQMDEELRREREREREREREREADRE 356
G R + ++A H + L Q D RRE++R+RER+R+RE DR+
Sbjct: 409 GYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDRERDRD 468
Query: 357 REKEREREREKEREQ-----------EKEREREKE------------RERELERQREQRA 393
R++ERER RE+ERE+ ++ER R +E RE+E ER RE+R
Sbjct: 469 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE-ERHRERRH 527
Query: 394 REKELLAAKALEPSFLPVAELHGLRGHATEE--RGKPSEQLTPTRAEKLKDAGLQAPKPV 451
REKE K+ + + R H +EE + + R+++ K+AG + P P
Sbjct: 528 REKEETRHKS--------SRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSE-PAPE 578
Query: 452 QHPLHPVP 459
Q P
Sbjct: 579 QESTEATP 586
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 73.9 bits (180), Expect = 8e-13
Identities = 138/555 (24%), Positives = 187/555 (33%), Gaps = 108/555 (19%)
Query: 49 ALSAQAAPSSSFAAALRKLAKQAEEPRGSSLSSESSPVSSPATNHSSPASTPKRVPMGPI 108
A S + P + A L ++ + SS SE+ V+ A H P PMGP
Sbjct: 589 APSPRCPPPLACALQAFSLGQREDSLEVSSFCSEAL-VTCAALTHPR---VPPLQPMGPT 644
Query: 109 ------IVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPL 162
+ PP S PP P +V + + AG S+G P+
Sbjct: 645 CPTPAPVPPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAG---------PV 695
Query: 163 PQEKAGGPAIPSHLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVV------------- 209
P + G P +HL GLS +V PP L P +H
Sbjct: 696 PSARPGPPTTANHL-------GLSVPGLVS---VPPRLLPGPENHRAGSNEDPILAPSGT 745
Query: 210 PPSTVTEDYL---RSFRPYHTTDDLRMSS--------------------LPPLGLDPATA 246
PP T+ D R RP D +S LPPL P +
Sbjct: 746 PPPTIPPDETFGGRVPRPAFVHYDKEEASDVEISLESDSDDSVVIVPEGLPPLPPPPPSG 805
Query: 247 AAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYP-------IPTPGSLPPLHPSAMHL 299
A + P P ++ L A P P +P P +LPP P +
Sbjct: 806 ATPPPIAPTGPPTASPPVPAKEEPEELPAAPGPLPPPPPPPPPVPGPVTLPP--PQLVPE 863
Query: 300 HLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREK 359
G PP L L ++ S E + +EE E E E E E + E + E E+
Sbjct: 864 GTPGGGGPPALEED-LTVININS----SDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEE 918
Query: 360 EREREREKEREQEKEREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRG 419
E E E+E E+ +E E+E E E E + E E+EL + LE G G
Sbjct: 919 EYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE---------FGTAG 969
Query: 420 HATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHP-LHPVPTPHHTV------PSLISNH 472
EE P L P P P P + P P P + P
Sbjct: 970 GEVEEGAPPPPTLPPA-----------LPPPESPPKVQPEPEPEPGLLLEVEEPGTEEER 1018
Query: 473 GIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQE-KEDRQSQVSEFRQQVLEQHLDMGR 531
G + P + A AL Q E E QE E+ S ++ E D +
Sbjct: 1019 GADTAP-TLAPEALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQ 1077
Query: 532 PPVPAEAEHRPESTT 546
PP AE E+ T
Sbjct: 1078 PPPETPAEEEMETET 1092
Score = 42.4 bits (98), Expect = 0.003
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 1066 PELQSSSRAPPPQHNGQQEPPTARKGPPTQELD--------RDSEEEEEEDDEDGEDEEE 1117
P + PPPQ + P GPP E D D EEEEEE++E+ E+EEE
Sbjct: 847 PPVPGPVTLPPPQLVPEGTPGGG--GPPALEEDLTVININSSDEEEEEEEEEEEEEEEEE 904
Query: 1118 VPKRKWQGIEAVFEAYQEHIEEQNLE 1143
+ ++ E E Y E EE+ E
Sbjct: 905 EEEEDFEEEEEDEEEYFEEEEEEEEE 930
Score = 39.7 bits (91), Expect = 0.018
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 1095 QELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLE 1143
+E + + EEEEEE++ED E+EEE + ++ E E ++E EE+ E
Sbjct: 893 EEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGE 941
Score = 34.3 bits (77), Expect = 0.74
Identities = 69/328 (21%), Positives = 118/328 (35%), Gaps = 49/328 (14%)
Query: 651 PPPPPPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSGPLKPGS 710
P PPPP G + P + GP A S ++ LP A GPL P
Sbjct: 797 PLPPPPPSGAT---PPPIAPTGPPTA----SPPVPAKEEPEELPAAP------GPLPPPP 843
Query: 711 PYRPPVP---RAPDPAYIYD--------EFLQQRRRLV---SKLDLEERRRREAQEKGYY 756
P PPVP P P + + L++ ++ S + EE E +E+
Sbjct: 844 PPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEE 903
Query: 757 YDLDDSYDESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRR 816
+ ++ ++E +E+E E+ + + E+ E + ++++EEL +
Sbjct: 904 EEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDL 963
Query: 817 K---RRRMLRERSPSPPTIQSKRQTPSPRLALSTRYSPDE----MNNSPNFEEKKKFLTI 869
+ + E +P PPT+ P + P+ P EE++ T
Sbjct: 964 EFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEPGTEEERGADTA 1023
Query: 870 FNLTHISAEKRKDKER-------------LVEMLRAMKQKALSAAVAD--SLTNSPRDSP 914
L + + + ER LVE + L D P ++P
Sbjct: 1024 PTLAPEALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETP 1083
Query: 915 AVSLSEPATQQASLDVEKPVGVAASLSD 942
A E T+ +L ++ AA L+D
Sbjct: 1084 AEEEMETETEAEALQEKEQDDTAAMLAD 1111
Score = 33.9 bits (76), Expect = 0.97
Identities = 57/231 (24%), Positives = 80/231 (34%), Gaps = 25/231 (10%)
Query: 507 EKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTT-RPGPNRHEPGG-RDPPQHF 564
++ED +VS F + L + P VP P T P P P R PP H
Sbjct: 609 QRED-SLEVSSFCSEALVTCAALTHPRVPPLQPMGPTCPTPAPVPPPEAPSPFRAPPFHP 667
Query: 565 GGPPPLISPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVK 624
GP P + P P+A P + + + R + +H P LV
Sbjct: 668 PGPMPSVGSMPSAGPMPSAGPMPSA---GPVPSARPGPPTTANHLGLSVPG------LVS 718
Query: 625 VERVFCPEKAEEGPRKREPAPLDKYQPPPP--PPRE--GGSLEHQPFLPGPGPFLAELEK 680
V P E L PPP PP E GG + F+ +++E
Sbjct: 719 VPPRLLPGPENHRAGSNEDPILAPSGTPPPTIPPDETFGGRVPRPAFVHYDKEEASDVEI 778
Query: 681 STQT-------ILGQQRASLPQAATFGELSGPLKPGSP--YRPPVPRAPDP 722
S ++ I+ + LP G P+ P P PPVP +P
Sbjct: 779 SLESDSDDSVVIVPEGLPPLPPPPPSGATPPPIAPTGPPTASPPVPAKEEP 829
Score = 32.7 bits (73), Expect = 2.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 1075 PPPQHNGQQEPPTARKGPPTQELDRDSEEEEEE 1107
PPP +G PP A GPPT ++EE EE
Sbjct: 799 PPPPPSGATPPPIAPTGPPTASPPVPAKEEPEE 831
Score = 32.3 bits (72), Expect = 2.8
Identities = 54/247 (21%), Positives = 80/247 (32%), Gaps = 68/247 (27%)
Query: 494 EEKWLARQRRLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRH 553
EE++ + L +E+E+ + E ++V + L+ G E P T P
Sbjct: 932 EEEFEEEEGELEEEEEEEDEEEEEELEEV--EDLEFGTAGGEVEEGAPPPPTLPPA---- 985
Query: 554 EPGGRDPPQHFGGPPPLISPKPQ-------------------LHAAPTALWNPVSLMDNT 594
PP+ PP + P+P+ APT P +L
Sbjct: 986 ----LPPPES----PPKVQPEPEPEPGLLLEVEEPGTEEERGADTAPTLA--PEALPSQG 1035
Query: 595 LETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPP 654
R ES PAA P ++ E+ E+G DK QPPP
Sbjct: 1036 EVEREGES------PAAGPPPQELVEEEPSAPPTLLEEETEDGS--------DKVQPPPE 1081
Query: 655 PPREGGSLEHQPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSGPLKPGSPYRP 714
P E E+E T+ Q++ AA + P +P
Sbjct: 1082 TPAE-----------------EEMETETEAEALQEKEQDDTAAMLADFID--CPPDDEKP 1122
Query: 715 PVPRAPD 721
P P PD
Sbjct: 1123 PPPTEPD 1129
Score = 30.8 bits (68), Expect = 8.2
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 1074 APPPQHNGQQEPPTARKGPPTQELDRDSEEEE----EEDDEDGEDE----EEVPKRKWQG 1125
A P Q ++E + GPP QEL + EE+ EDG D+ E P +
Sbjct: 1030 ALPSQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETPAEEEME 1089
Query: 1126 IEAVFEAYQE 1135
E EA QE
Sbjct: 1090 TETEAEALQE 1099
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
Length = 1341
Score = 72.8 bits (177), Expect = 2e-12
Identities = 36/88 (40%), Positives = 59/88 (67%), Gaps = 5/88 (5%)
Query: 310 LSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKER 369
L+ S + +ER AER + E+ R+E+E E ++ERE+EA+RER ++ ERE+ +E
Sbjct: 1229 LTDSQIVQKEAER-----AERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREH 1283
Query: 370 EQEKEREREKERERELERQREQRAREKE 397
+E++RERE+ERER+ + R R++E
Sbjct: 1284 SRERDRERERERERDRGDRDRDRERDRE 1311
Score = 72.4 bits (176), Expect = 2e-12
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 317 ALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE 376
A +ER R + +EE ++ERE+E ERER R+ +RE+ +E RER++ERE+E+ER+
Sbjct: 1239 AERAERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERD 1298
Query: 377 R-EKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLR 418
R +++R+RE +R+R + ++ PV + G R
Sbjct: 1299 RGDRDRDRERDRERGRERDRRDTKRHSRSRSRSTPVRDRGGRR 1341
Score = 52.4 bits (124), Expect = 3e-06
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 339 RERERERERE-REREADREREKEREREREKEREQEKERERE--KERERELERQREQRARE 395
R +RE+ER RE+ A+RERE ER ERE ++++ RE + R R +R+R++RA+
Sbjct: 1132 RAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKS 1191
Query: 396 KELLAAKALEPSFLPVAEL 414
KE + K + P A+L
Sbjct: 1192 KEKKSEKKEKAQEEPPAKL 1210
Score = 48.9 bits (115), Expect = 3e-05
Identities = 38/135 (28%), Positives = 53/135 (39%), Gaps = 40/135 (29%)
Query: 279 PFYPIPTPGSLPPLHPSAMHLHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELR 338
P +P P P PP HP R + E+ R
Sbjct: 1116 PLHPPPPPPVQPPQHP-----------------------------------RAEQREQER 1140
Query: 339 REREREREREREREADREREKEREREREKEREQEKER-----EREKERERELERQREQRA 393
RE+ ERERE E ERE +R+K RE + R R KER + E++ E++
Sbjct: 1141 AVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKE 1200
Query: 394 REKELLAAKALEPSF 408
+ +E AK L+ F
Sbjct: 1201 KAQEEPPAKLLDDLF 1215
Score = 43.9 bits (102), Expect = 0.001
Identities = 55/202 (27%), Positives = 74/202 (36%), Gaps = 53/202 (26%)
Query: 328 AERLQMDEELRREREREREREREREADREREKERER-----------------------E 364
A+R EE E E E E + E E D E +K RE E
Sbjct: 263 ADRNLKTEEEEEEEEEEEEDDEEEEGDDEGQKSREAPILKEFKEEGEEIPRVKPEEMMDE 322
Query: 365 REKEREQEKE---------REREKERERELERQREQRAREKELLAAKALEPSFLPVAELH 415
R K R QE+E R +E+ R+ L RQ++ EKE+ LE +
Sbjct: 323 RPKTRSQEQEVLERGGRFTRSQEEARKSHLARQQQ----EKEMKTTSPLEEEEREIKSSQ 378
Query: 416 GLRGHA--------TEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHPLHPVPTPHHTVPS 467
GL+ + TE+R K S P + + + P P+ P PH P
Sbjct: 379 GLKEKSKSPSPPRLTEDRKKASLVALPEQTASEE----ETPPPLLTKEASSPPPH---PQ 431
Query: 468 LISNHGIFSLPSSSAATALLIQ 489
L S I P A +LIQ
Sbjct: 432 LHSEEEI--EPMEGPAPPVLIQ 451
Score = 39.7 bits (91), Expect = 0.018
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 24/145 (16%)
Query: 308 PELSHSSLAALHSERMSG-LSAERLQMDEELRREREREREREREREADR--------ERE 358
PEL S HS R S +S E+ D+E R+ ER R R+ A + E E
Sbjct: 194 PELELSR----HSPRKSSSISEEKGDSDDEKPRKGERRSSRVRQARAAKLSEGSQPAEEE 249
Query: 359 KERE-----------REREKEREQEKEREREKERERELERQREQRAREKELLAAKALEPS 407
+++E R + E E+E+E E E++ E E Q++RE +L E
Sbjct: 250 EDQETPSRNLRVRADRNLKTEEEEEEEEEEEEDDEEEEGDDEGQKSREAPILKEFKEEGE 309
Query: 408 FLPVAELHGLRGHATEERGKPSEQL 432
+P + + + R + E L
Sbjct: 310 EIPRVKPEEMMDERPKTRSQEQEVL 334
Score = 35.4 bits (80), Expect = 0.33
Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 11/135 (8%)
Query: 1070 SSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEA- 1128
S P + Q+ P + + L + EEEEEE++E+ ++EEE + EA
Sbjct: 240 SEGSQPAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEDDEEEEGDDEGQKSREAP 299
Query: 1129 VFEAYQEH--------IEEQNLERQVLQTQCRRLEAR--HYSLSLTAEQLSHSVAELRSQ 1178
+ + ++E EE ER ++Q + + R ++ S + SH + + +
Sbjct: 300 ILKEFKEEGEEIPRVKPEEMMDERPKTRSQEQEVLERGGRFTRSQEEARKSHLARQQQEK 359
Query: 1179 KQKMVSERERLQAEL 1193
+ K S E + E+
Sbjct: 360 EMKTTSPLEEEEREI 374
Score = 33.5 bits (75), Expect = 1.3
Identities = 48/217 (22%), Positives = 80/217 (36%), Gaps = 29/217 (13%)
Query: 327 SAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELE 386
S E + R+++E+E + E + K + +EK + R E ++ L
Sbjct: 343 SQEEARKSHLARQQQEKEMKTTSPLEEEEREIKSSQGLKEKSKSPSPPRLTEDRKKASLV 402
Query: 387 RQREQRAREKE----LLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKD 442
EQ A E+E LL +A P P +LH +EE +P E P
Sbjct: 403 ALPEQTASEEETPPPLLTKEASSPP--PHPQLH------SEEEIEPMEGPAP-------- 446
Query: 443 AGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQR 502
PV L P T T L+S H + + S ++ + + + +
Sbjct: 447 -------PVLIQLSPPNTDADTRELLVSQHTVQLVGGLSPLSSPSDTKAESPAEKVPEES 499
Query: 503 RLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAE 539
L ++ + S Q+ LE D P+P + E
Sbjct: 500 VLPLVQKSTLADYS--AQKDLEPESDRSAQPLPLKIE 534
>gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 72.0 bits (175), Expect = 3e-12
Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 320 SERMSGLSAERLQMDEELRRERERERERERE-READREREKEREREREKEREQEKERERE 378
+ER ER Q E RR+R+RER+RE+E RE DR+R+KERE++R +ERE ++R++E
Sbjct: 169 TERYRDRERER-QKQRETRRDRDRERQREKEDRERDRDRQKEREKDRYRERETGRDRDKE 227
Query: 379 KERERELERQREQR 392
++RER+ E+ R+++
Sbjct: 228 RDRERQREKDRDRQ 241
Score = 70.1 bits (170), Expect = 1e-11
Identities = 36/102 (35%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Query: 299 LHLSGVRYPPELSHSSLAALHSERMSGLSAER-LQMDEELRREREREREREREREADRER 357
L L G R P + ER + ER + D E+ ++R+R+R+R+RER+ R+R
Sbjct: 45 LILRGSRVAPAIIRERERQRERERQRKRAKERHREKDREIEKDRDRQRKRDRERQRWRDR 104
Query: 358 EKEREREREKEREQEKEREREKERERELERQRE-QRAREKEL 398
+++RER +++RE E ER+ E+ER+R+ +R+++ +R R++E+
Sbjct: 105 DRKRERWGDRDRETETERQEERERQRDRKREKDRERQRQREI 146
Score = 64.7 bits (156), Expect = 5e-10
Identities = 32/80 (40%), Positives = 55/80 (68%), Gaps = 11/80 (13%)
Query: 329 ERLQMDEELRREREREREREREREADRER----EKERERERE-------KEREQEKERER 377
E + + +RE++RER+R+RE D++R EK+R+RERE ++RE+E++++R
Sbjct: 124 EERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRDRERERQKQR 183
Query: 378 EKERERELERQREQRAREKE 397
E R+R+ ERQRE+ RE++
Sbjct: 184 ETRRDRDRERQREKEDRERD 203
Score = 64.7 bits (156), Expect = 5e-10
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 20/104 (19%)
Query: 321 ERMSGLSAERLQMDEELRRERERE-------REREREREADRE--REKEREREREKE--- 368
+R G+ +R +++ E R+RERE R+RERER+ RE R+++RER+REKE
Sbjct: 143 QREIGIDKDR-EIETEKDRDREREMGETERYRDRERERQKQRETRRDRDRERQREKEDRE 201
Query: 369 --REQEKEREREKERERELERQRE-----QRAREKELLAAKALE 405
R+++KERE+++ RERE R R+ +R REK+ KA++
Sbjct: 202 RDRDRQKEREKDRYRERETGRDRDKERDRERQREKDRDRQKAID 245
Score = 62.4 bits (150), Expect = 3e-09
Identities = 28/65 (43%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 393
D + +RER +R+RE E E ERE++R+R+REK+RE++++RE +++RE+E +++ R
Sbjct: 103 DRDRKRERWGDRDRETETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKD-RD 161
Query: 394 REKEL 398
RE+E+
Sbjct: 162 REREM 166
Score = 62.4 bits (150), Expect = 3e-09
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 20/84 (23%)
Query: 334 DEELRREREREREREREREADREREKERERE----REKEREQEKEREREKE--------- 380
D E ER+ ERER+R+R+ +++RE++R+RE +++E E EK+R+RE+E
Sbjct: 115 DRETETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRD 174
Query: 381 RERELERQRE-------QRAREKE 397
RERE ++QRE +R REKE
Sbjct: 175 RERERQKQRETRRDRDRERQREKE 198
Score = 60.5 bits (145), Expect = 1e-08
Identities = 27/64 (42%), Positives = 45/64 (70%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 393
D + E ER+ ERER+R+ RE+++ER+R+RE ++++E E EK+R+RE E +R
Sbjct: 113 DRDRETETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERY 172
Query: 394 REKE 397
R++E
Sbjct: 173 RDRE 176
>gi|239745093 PREDICTED: hypothetical protein XP_002343359 [Homo
sapiens]
Length = 142
Score = 71.2 bits (173), Expect = 5e-12
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 16/101 (15%)
Query: 307 PPELSHSSLAALHSERMSGLSAERLQMDEELRRERER--EREREREREADREREKERERE 364
PP L HS M+G SA + Q EE RRE +R E+ RE +R + REKE E+E
Sbjct: 50 PPTLRHS---------MAGTSARKSQRREEKRREEKRREEKRREEKRREGKRREKEEEKE 100
Query: 365 REKEREQEKEREREKERERELE-----RQREQRAREKELLA 400
E+E E+E+E E E+E E E+ R+RE EK L++
Sbjct: 101 EEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLIS 141
Score = 46.6 bits (109), Expect = 1e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE---R 377
E ++GL+ + EE R + RE ++ E+ RE++R +EK RE R
Sbjct: 34 ENLAGLTNSTSSVKEEPPTLRHSMAGTSARKSQRREEKRREEKRREEKRREEKRREGKRR 93
Query: 378 EKERERELERQREQRAREKE 397
EKE E+E E + E+ E+E
Sbjct: 94 EKEEEKEEEEEEEEEEEEEE 113
Score = 32.0 bits (71), Expect = 3.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 1089 RKGPPTQELDRDSEEEEEEDDEDGEDEEEV 1118
R+ ++ + + EEEEEE++E+ E+EEEV
Sbjct: 92 RREKEEEKEEEEEEEEEEEEEEEEEEEEEV 121
Score = 31.6 bits (70), Expect = 4.8
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 1089 RKGPPTQELDRDSEEEEEEDDEDGEDEEE 1117
R+ +E + + EEEEEE++E+ E+EEE
Sbjct: 87 RREGKRREKEEEKEEEEEEEEEEEEEEEE 115
Score = 31.6 bits (70), Expect = 4.8
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 1089 RKGPPTQELDRDSEEEEEEDDEDGEDEEE 1117
R+G ++ + EEEEEE++E+ E+EEE
Sbjct: 88 REGKRREKEEEKEEEEEEEEEEEEEEEEE 116
Score = 30.8 bits (68), Expect = 8.2
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 1089 RKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQVL 1147
R+ +E R +EEE+E++E+ E+EEE + + + E F E + E++++
Sbjct: 82 RREEKRREGKRREKEEEKEEEEEEEEEEEEEEEEEEEEEVSFSLATRERETETEEKRLI 140
>gi|125988409 RED protein [Homo sapiens]
Length = 557
Score = 70.9 bits (172), Expect = 7e-12
Identities = 34/63 (53%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Query: 327 SAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELE 386
S + D+E RER RERER+RER+ DR+RE+ERER+RE+ERE+++ERE EK+R E
Sbjct: 328 STTKTPRDKE--RERYRERERDRERDRDRDRERERERDRERERERDREREEEKKRHSYFE 385
Query: 387 RQR 389
+ +
Sbjct: 386 KPK 388
Score = 63.9 bits (154), Expect = 9e-10
Identities = 25/49 (51%), Positives = 44/49 (89%)
Query: 345 REREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 393
R++ERER +RER++ER+R+R++ERE+E++RERE+ER+RE E ++++ +
Sbjct: 334 RDKERERYRERERDRERDRDRDRERERERDRERERERDREREEEKKRHS 382
Score = 61.2 bits (147), Expect = 6e-09
Identities = 24/46 (52%), Positives = 41/46 (89%)
Query: 349 REREADREREKEREREREKEREQEKEREREKERERELERQREQRAR 394
R++E +R RE+ER+RER+++R++E+ERER++ERERE +R+RE+ +
Sbjct: 334 RDKERERYRERERDRERDRDRDRERERERDRERERERDREREEEKK 379
Score = 60.1 bits (144), Expect = 1e-08
Identities = 25/46 (54%), Positives = 39/46 (84%)
Query: 351 READREREKEREREREKEREQEKEREREKERERELERQREQRAREK 396
R+ +RER +ERER+RE++R++++ERERE++RERE ER RE+ +K
Sbjct: 334 RDKERERYRERERDRERDRDRDRERERERDRERERERDREREEEKK 379
Score = 60.1 bits (144), Expect = 1e-08
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 393
+ E RER+R+R+RERERE DRERE+ER+RERE+E+++ E+ K + ++ +
Sbjct: 343 ERERDRERDRDRDRERERERDRERERERDREREEEKKRHSYFEKPKVDDEPMDVDKGP-G 401
Query: 394 REKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQ 431
KEL+ K++ F A G TE KP ++
Sbjct: 402 STKELI--KSINEKFAGSAGWEG-----TESLKKPEDK 432
Score = 58.5 bits (140), Expect = 4e-08
Identities = 26/44 (59%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
Query: 354 DREREKEREREREKEREQEKEREREKERERELERQREQRAREKE 397
D+ERE+ RERER++ER+++++RERE+ER+RE ER+R+ R RE+E
Sbjct: 335 DKERERYRERERDRERDRDRDRERERERDRERERERD-REREEE 377
Score = 35.4 bits (80), Expect = 0.33
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 343 REREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREK 396
+ R E RE + E E R R+K+ K R++E EREREL + RA+E+
Sbjct: 54 KSRHHEMPREYN-EDEDPAARRRKKKSYYAKLRQQEIERERELAEKYRDRAKER 106
Score = 32.7 bits (73), Expect = 2.2
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 339 RERERERE-REREREADREREKEREREREKEREQEKERE-REKERERELERQR--EQRAR 394
R E RE E E A R R+K+ + +++E E+ERE EK R+R ER+ +
Sbjct: 56 RHHEMPREYNEDEDPAARRRKKKSYYAKLRQQEIERERELAEKYRDRAKERRDGVNKDYE 115
Query: 395 EKELLAAKALEPSFLPVAE 413
E EL++ A + P AE
Sbjct: 116 ETELISTTANYRAVGPTAE 134
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 70.1 bits (170), Expect = 1e-11
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Query: 309 ELSHSSLAALHSERMSGLSAERLQMDEELRRERER-EREREREREADREREKEREREREK 367
EL A L +R +L+ E+ R+ERER E+ER+R+ E +++ EK+RE ER++
Sbjct: 364 ELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQR 423
Query: 368 EREQEKEREREKERERELERQRE---QRAREKELL 399
E E+ KE ER + +RELERQR+ +R R +ELL
Sbjct: 424 EEERRKEIERREAAKRELERQRQLEWERNRRQELL 458
Score = 56.6 bits (135), Expect = 1e-07
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 10/119 (8%)
Query: 329 ERLQMDEELRRERERERER-EREREADREREKEREREREKEREQEKER----EREKERER 383
ER ++ E RR+ E++R E+ER A ER ++ +ERE++ EQE++R E++ E++R
Sbjct: 359 ERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQ-EQERKRQLELEKQLEKQR 417
Query: 384 ELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATE---ERGKPSEQLTPTRAEK 439
ELERQRE+ R KE+ +A + +L R E +R K E + +A+K
Sbjct: 418 ELERQREEE-RRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKK 475
Score = 54.7 bits (130), Expect = 5e-07
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 315 LAALHSERMSGLSAERLQMDE----ELRREREREREREREREADREREKEREREREKERE 370
LA L ER + + EL ++ E++RE ER+RE +R +E ER ++E E
Sbjct: 383 LAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELE 442
Query: 371 QEKEREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSE 430
++++ E E+ R +EL QR + + +L AK F EL L + GK +
Sbjct: 443 RQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEF----ELEALNDKKHQLEGKLQD 498
Query: 431 ---QLTPTRAE 438
+LT R E
Sbjct: 499 IRCRLTTQRQE 509
Score = 44.3 bits (103), Expect = 7e-04
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
++ + AERL+ E+ R+ E E+++E EA R R +ER+++ + +QE E +R ++
Sbjct: 620 QKQKSMEAERLKQKEQERKIIELEKQKE---EAQR-RAQERDKQWLEHVQQEDEHQRPRK 675
Query: 381 RERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEK 439
E + +RE+ ++K+ E + G H +E KP+ Q + AEK
Sbjct: 676 LHEEEKLKREESVKKKD-----GEEKGKQEAQDKLGRLFHQHQEPAKPAVQAPWSTAEK 729
Score = 42.0 bits (97), Expect = 0.004
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 30/166 (18%)
Query: 296 AMHL---HLSGVRYPPEL-------------SHSSLAALHSERMSG-LSAERLQMDEELR 338
AMHL +SG PP L S S ++ + S + L E + DE+ +
Sbjct: 282 AMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQ 341
Query: 339 RERE-----REREREREREADREREKEREREREKER-EQEKEREREKERERELERQREQR 392
E++ +++RE + E EK R+ E++R EQE+ + E+ + ER+R+++
Sbjct: 342 LEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQ 401
Query: 393 AREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAE 438
R+++L K LE + L EER K E+ + E
Sbjct: 402 ERKRQLELEKQLE-------KQRELERQREEERRKEIERREAAKRE 440
Score = 33.9 bits (76), Expect = 0.97
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 485 ALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQV-LEQHLDMGRPPVPAEAEHRPE 543
ALL Q+ E+E+ LA+ R QE+++R+ Q E ++Q+ LE+ L+ R E E + E
Sbjct: 371 ALLEQQRKEQER-LAQLERAEQERKERERQEQERKRQLELEKQLEKQR-----ELERQRE 424
Query: 544 STTRPGPNRHEPGGRD 559
R R E R+
Sbjct: 425 EERRKEIERREAAKRE 440
Score = 33.5 bits (75), Expect = 1.3
Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 1095 QELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQ---VLQTQC 1151
+EL+R EEE ++ E E + +R+ Q +E QE + ++N E++ VL+ +
Sbjct: 417 RELERQREEERRKEIERREAAKRELERQRQ-LEWERNRRQELLNQRNKEQEDIVVLKAKK 475
Query: 1152 RRLEARHYSLSLTAEQLSHSVAELR----SQKQKMVS---ERERLQAELDHLRKCL 1200
+ LE +L+ QL + ++R +Q+Q++ S RE AE+ HL++ L
Sbjct: 476 KTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQL 531
Score = 33.1 bits (74), Expect = 1.7
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 24/123 (19%)
Query: 330 RLQMDEELRRERERERERE---------REREADREREKEREREREKEREQEKER---ER 377
R Q+DE + R + +E + RE ++ +K++ E E+ +++E+ER E
Sbjct: 583 RDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIEL 642
Query: 378 EKERERELERQREQRAREKELLAAKALEPSFLPVAELH---------GLRGHATEERGKP 428
EK++E E QR + R+K+ L E +LH ++ EE+GK
Sbjct: 643 EKQKE---EAQRRAQERDKQWLEHVQQEDEHQRPRKLHEEEKLKREESVKKKDGEEKGKQ 699
Query: 429 SEQ 431
Q
Sbjct: 700 EAQ 702
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 70.1 bits (170), Expect = 1e-11
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Query: 309 ELSHSSLAALHSERMSGLSAERLQMDEELRRERER-EREREREREADREREKEREREREK 367
EL A L +R +L+ E+ R+ERER E+ER+R+ E +++ EK+RE ER++
Sbjct: 364 ELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQR 423
Query: 368 EREQEKEREREKERERELERQRE---QRAREKELL 399
E E+ KE ER + +RELERQR+ +R R +ELL
Sbjct: 424 EEERRKEIERREAAKRELERQRQLEWERNRRQELL 458
Score = 56.6 bits (135), Expect = 1e-07
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 10/119 (8%)
Query: 329 ERLQMDEELRRERERERER-EREREADREREKEREREREKEREQEKER----EREKERER 383
ER ++ E RR+ E++R E+ER A ER ++ +ERE++ EQE++R E++ E++R
Sbjct: 359 ERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQ-EQERKRQLELEKQLEKQR 417
Query: 384 ELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATE---ERGKPSEQLTPTRAEK 439
ELERQRE+ R KE+ +A + +L R E +R K E + +A+K
Sbjct: 418 ELERQREEE-RRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKK 475
Score = 54.7 bits (130), Expect = 5e-07
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 315 LAALHSERMSGLSAERLQMDE----ELRREREREREREREREADREREKEREREREKERE 370
LA L ER + + EL ++ E++RE ER+RE +R +E ER ++E E
Sbjct: 383 LAQLERAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELE 442
Query: 371 QEKEREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSE 430
++++ E E+ R +EL QR + + +L AK F EL L + GK +
Sbjct: 443 RQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEF----ELEALNDKKHQLEGKLQD 498
Query: 431 ---QLTPTRAE 438
+LT R E
Sbjct: 499 IRCRLTTQRQE 509
Score = 44.3 bits (103), Expect = 7e-04
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
++ + AERL+ E+ R+ E E+++E EA R R +ER+++ + +QE E +R ++
Sbjct: 620 QKQKSMEAERLKQKEQERKIIELEKQKE---EAQR-RAQERDKQWLEHVQQEDEHQRPRK 675
Query: 381 RERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEK 439
E + +RE+ ++K+ E + G H +E KP+ Q + AEK
Sbjct: 676 LHEEEKLKREESVKKKD-----GEEKGKQEAQDKLGRLFHQHQEPAKPAVQAPWSTAEK 729
Score = 42.0 bits (97), Expect = 0.004
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 30/166 (18%)
Query: 296 AMHL---HLSGVRYPPEL-------------SHSSLAALHSERMSG-LSAERLQMDEELR 338
AMHL +SG PP L S S ++ + S + L E + DE+ +
Sbjct: 282 AMHLIDVAMSGQPLPPVLPPEYIPPSFRRVRSGSGISVISSTSVDQRLPEEPVLEDEQQQ 341
Query: 339 RERE-----REREREREREADREREKEREREREKER-EQEKEREREKERERELERQREQR 392
E++ +++RE + E EK R+ E++R EQE+ + E+ + ER+R+++
Sbjct: 342 LEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQ 401
Query: 393 AREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAE 438
R+++L K LE + L EER K E+ + E
Sbjct: 402 ERKRQLELEKQLE-------KQRELERQREEERRKEIERREAAKRE 440
Score = 33.9 bits (76), Expect = 0.97
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 485 ALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQV-LEQHLDMGRPPVPAEAEHRPE 543
ALL Q+ E+E+ LA+ R QE+++R+ Q E ++Q+ LE+ L+ R E E + E
Sbjct: 371 ALLEQQRKEQER-LAQLERAEQERKERERQEQERKRQLELEKQLEKQR-----ELERQRE 424
Query: 544 STTRPGPNRHEPGGRD 559
R R E R+
Sbjct: 425 EERRKEIERREAAKRE 440
Score = 33.5 bits (75), Expect = 1.3
Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 1095 QELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQ---VLQTQC 1151
+EL+R EEE ++ E E + +R+ Q +E QE + ++N E++ VL+ +
Sbjct: 417 RELERQREEERRKEIERREAAKRELERQRQ-LEWERNRRQELLNQRNKEQEDIVVLKAKK 475
Query: 1152 RRLEARHYSLSLTAEQLSHSVAELR----SQKQKMVS---ERERLQAELDHLRKCL 1200
+ LE +L+ QL + ++R +Q+Q++ S RE AE+ HL++ L
Sbjct: 476 KTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQQL 531
Score = 33.1 bits (74), Expect = 1.7
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 24/123 (19%)
Query: 330 RLQMDEELRRERERERERE---------REREADREREKEREREREKEREQEKER---ER 377
R Q+DE + R + +E + RE ++ +K++ E E+ +++E+ER E
Sbjct: 583 RDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIEL 642
Query: 378 EKERERELERQREQRAREKELLAAKALEPSFLPVAELH---------GLRGHATEERGKP 428
EK++E E QR + R+K+ L E +LH ++ EE+GK
Sbjct: 643 EKQKE---EAQRRAQERDKQWLEHVQQEDEHQRPRKLHEEEKLKREESVKKKDGEEKGKQ 699
Query: 429 SEQ 431
Q
Sbjct: 700 EAQ 702
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 70.1 bits (170), Expect = 1e-11
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 307 PPELSHSSLAALHSERMSGLSAERLQMDEELRRERERERER-EREREADREREKERERER 365
P EL S S S E + R E ERERER E+ERE +REREKE+ERER
Sbjct: 533 PAELKPDSEDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKERER 592
Query: 366 EKEREQEKEREREKERERELERQREQRAREKELLAAKALE 405
EK++ +E E+ER+ +++E + + R +E E++ +E
Sbjct: 593 EKQKLKESEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIE 632
Score = 55.8 bits (133), Expect = 2e-07
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 30/149 (20%)
Query: 311 SHSSLAALHSERMSGLSAERLQMDEEL-RREREREREREREREADREREKEREREREKER 369
S SS + E + + ++R + + E RRE+ERERERERE+E +REREK++ +E EKER
Sbjct: 545 SQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEKER 604
Query: 370 EQEKER---------------------------EREKERERELERQREQRAREKELLAAK 402
+ K++ E +KE + L+ R +++ +
Sbjct: 605 DSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLM 664
Query: 403 ALEPSFLPVAELHGLRGHATEERGKPSEQ 431
A E AEL LR + K ++
Sbjct: 665 AAEKK--SKAELEDLRQRLKDLEDKEKKE 691
Score = 33.9 bits (76), Expect = 0.97
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 304 VRYPPELSHSSLAALHSERMSGLSAERLQMDEELRRERERERERERE---READREREKE 360
+RY +L + + SG + + Q E ++ E + + E ++ + +
Sbjct: 495 LRYKRKLREAQSDLNKTRLRSGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASKASQ 554
Query: 361 REREREKEREQEKEREREKERERELERQREQRAREKE 397
+ K + E+ERERE+ RE ER+RE R REKE
Sbjct: 555 EDANEIKSKRDEEERERER---REKERERE-REREKE 587
Score = 33.9 bits (76), Expect = 0.97
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 4/133 (3%)
Query: 321 ERMSGLSAERLQMDEELRRER---EREREREREREADREREKEREREREKEREQEKE-RE 376
E S L+ RL+ L + + E ++ E + D E + + +E E +
Sbjct: 503 EAQSDLNKTRLRSGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASKASQEDANEIKS 562
Query: 377 REKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTR 436
+ E ERE ER+ ++R RE+E K E + E R A ++ +
Sbjct: 563 KRDEEERERERREKEREREREREKEKEREREKQKLKESEKERDSAKDKEKGKHDDGRKKE 622
Query: 437 AEKLKDAGLQAPK 449
AE +K ++ K
Sbjct: 623 AEIIKQLKIELKK 635
Score = 31.6 bits (70), Expect = 4.8
Identities = 29/145 (20%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 1066 PELQSSSRAPPPQHNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQG 1125
P+ + S Q++ + +E +R+ E+E E + + E E+E + K +
Sbjct: 538 PDSEDLSSQSSASKASQEDANEIKSKRDEEERERERREKEREREREREKEKEREREKQKL 597
Query: 1126 IEAVFEAYQ-------EHIEEQNLERQV---LQTQCRRLEARHYSLSLTAEQLSHSVAEL 1175
E+ E +H + + E ++ L+ + ++ + + L + + E
Sbjct: 598 KESEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQ 657
Query: 1176 RSQKQKMVSERERLQAELDHLRKCL 1200
R + Q M +E+ + +AEL+ LR+ L
Sbjct: 658 RDKVQLMAAEK-KSKAELEDLRQRL 681
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 70.1 bits (170), Expect = 1e-11
Identities = 67/234 (28%), Positives = 104/234 (44%), Gaps = 32/234 (13%)
Query: 315 LAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKE 374
L A +R+ +R +++E+ RRERE R++ERE+ + EK R E E+ R++E+E
Sbjct: 391 LLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEE 450
Query: 375 REREKERERELERQRE--QRAREKELLAAKALEPSFL-PVAELHGLRGHATEERGKPSEQ 431
R R +E +R +ER++E +R E+E + L+ L A L R EE +
Sbjct: 451 RRRAEEEKRRVEREQEYIRRQLEEEQRHLEVLQQQLLQEQAMLLECRWREMEEHRQAERL 510
Query: 432 LTPTRAEKLKDAGLQAPKPVQHPLH----PVPTPHHTVPSLISNHGIFSLPSSSAATALL 487
+ E+ LQ HP H P P + PS F P A
Sbjct: 511 QRQLQQEQAYLLSLQHDHRRPHPQHSQQPPPPQQERSKPS-------FHAPEPKA----- 558
Query: 488 IQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQ--QVLEQHLDMGRPPVPAEAE 539
+ E AR+ R K + S ++ +Q +VLE PPVP+ +E
Sbjct: 559 ----HYEPADRAREVEDRFRKTNHSSPEAQSKQTGRVLE-------PPVPSRSE 601
Score = 54.3 bits (129), Expect = 7e-07
Identities = 25/78 (32%), Positives = 48/78 (61%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 378
+ ER L ++L +++LR + E +R+ ER+ E++KE+ R E+++ +E+E R+
Sbjct: 363 NKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQ 422
Query: 379 KERERELERQREQRAREK 396
+ERE+ Q E+R E+
Sbjct: 423 QEREQRRREQEEKRRLEE 440
Score = 53.1 bits (126), Expect = 2e-06
Identities = 24/68 (35%), Positives = 44/68 (64%)
Query: 330 RLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQR 389
+L + + R E+++E+ R E + RERE R++ERE+ R +++E+ R +E ER + +
Sbjct: 390 QLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEE 449
Query: 390 EQRAREKE 397
E+R E+E
Sbjct: 450 ERRRAEEE 457
Score = 51.2 bits (121), Expect = 6e-06
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 34/237 (14%)
Query: 326 LSAERLQMDEELRREREREREREREREA-DREREKEREREREKEREQEKEREREKERERE 384
L E + E LRR++ + ++ RE+E R+ ER++ E+++EQ + E ++ RERE
Sbjct: 359 LQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRRERE 418
Query: 385 LERQ--REQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKD 442
RQ REQR RE+E + LE EL R E R RAE+ K
Sbjct: 419 ARRQQEREQRRREQE--EKRRLE-------ELERRRKEEEERR----------RAEEEKR 459
Query: 443 AGLQAPKPVQHPLHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQR 502
+ + ++ L + + A+L++ E + +
Sbjct: 460 RVEREQEYIRRQLEEEQRHLEVLQQQLLQE-----------QAMLLECRWREMEEHRQAE 508
Query: 503 RLRQEKEDRQSQVSEFRQQVLEQHLDMGRPPVPAEAEHRPESTTRPGPNRH-EPGGR 558
RL+++ + Q+ + + H + P P + E S P P H EP R
Sbjct: 509 RLQRQLQQEQAYLLSLQHDHRRPHPQHSQQPPPPQQERSKPSFHAPEPKAHYEPADR 565
Score = 50.8 bits (120), Expect = 8e-06
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 322 RMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERE---RE 378
R L ++L+ EE +R+ ER++ E++ ++ R E ++ RE+E +++ERE RE
Sbjct: 372 RQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRRE 431
Query: 379 KERERELERQREQRAREKE 397
+E +R LE +R E+E
Sbjct: 432 QEEKRRLEELERRRKEEEE 450
Score = 38.1 bits (87), Expect = 0.051
Identities = 65/273 (23%), Positives = 105/273 (38%), Gaps = 27/273 (9%)
Query: 731 QQRRRLVSKLDLEERRRREAQEKGYYYDLDDSYDESDE----EEVRAHLRCVAEQPPLKL 786
Q+R R + E+RRRE +EK +L+ E +E EE + + E +L
Sbjct: 413 QRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQL 472
Query: 787 DTSSEKLEFLQLFGLTTQ------QQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPS 840
+ LE LQ L Q + +E ++ + +R L++ ++Q + P
Sbjct: 473 EEEQRHLEVLQQQLLQEQAMLLECRWREMEEHRQAERLQRQLQQEQAYLLSLQHDHRRPH 532
Query: 841 PRLALSTRYSPDEMNNSPNF---EEKKKFLTIFNLTHISAEKRKDKERLVEMLRAMKQKA 897
P+ + P + + P+F E K + + RK E +
Sbjct: 533 PQHSQQPP-PPQQERSKPSFHAPEPKAHYEPADRAREVEDRFRKTNHSSPEAQSKQTGRV 591
Query: 898 LSAAV---ADSLTNSPRDSPAVSLSEPATQQ------ASL-DVEKPVGVAASLSDIPKAA 947
L V ++S +N +S +L PA Q ASL + PV + S SD
Sbjct: 592 LEPPVPSRSESFSNGNSESVHPALQRPAEPQVQWSHLASLKNNVSPVSRSHSFSDPSPKF 651
Query: 948 EPGKLEQVRPQELSRVQELAPASGEKARLSEAP 980
L P SR + L+ +S K SEAP
Sbjct: 652 AHHHLRSQDPCPPSRSEVLSQSSDSK---SEAP 681
Score = 35.0 bits (79), Expect = 0.44
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 1082 QQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHI---- 1137
Q+ AR+ ++ R+ EE+ ++ + +EE +R+ + + E QE+I
Sbjct: 413 QRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQL 472
Query: 1138 -EEQN----LERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERERLQAE 1192
EEQ L++Q+LQ Q LE R E H AE R Q+Q + L +
Sbjct: 473 EEEQRHLEVLQQQLLQEQAMLLECR------WREMEEHRQAE-RLQRQLQQEQAYLLSLQ 525
Query: 1193 LDHLR 1197
DH R
Sbjct: 526 HDHRR 530
Score = 31.2 bits (69), Expect = 6.3
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query: 1079 HNGQQEPPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIE 1138
H + K E EEEEE +++GE V + F Q+ +
Sbjct: 305 HIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENK 364
Query: 1139 EQN--LERQVLQTQCRRLEARHYSLSLTAEQLSHSVAELRSQKQKMVSERERLQAE 1192
E++ L RQ L + + E Y L AE+ E + ++++ + E++R + E
Sbjct: 365 ERSEALRRQQLLQEQQLREQEEYKRQLLAERQKR--IEQQKEQRRRLEEQQRRERE 418
>gi|14670268 RD RNA-binding protein [Homo sapiens]
Length = 380
Score = 68.9 bits (167), Expect = 3e-11
Identities = 26/58 (44%), Positives = 49/58 (84%)
Query: 340 EREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAREKE 397
ER R+R+R+RER+ DR+R+++RER+R+++R+++++RER+++RER+ +R RE R +
Sbjct: 193 ERNRDRDRDRERDRDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSD 250
Score = 67.8 bits (164), Expect = 6e-11
Identities = 27/73 (36%), Positives = 52/73 (71%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERERE 378
+ ER S+ R ER R+R+R+RE DR+R+++R+RER+++R+++++R+RE
Sbjct: 170 YEERSGAHSSASPPRSRSRDRSHERNRDRDRDRERDRDRDRDRDRERDRDRDRDRDRDRE 229
Query: 379 KERERELERQREQ 391
++R+RE +R R++
Sbjct: 230 RDRDRERDRDRDR 242
Score = 67.4 bits (163), Expect = 8e-11
Identities = 24/55 (43%), Positives = 48/55 (87%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQ 388
D R R+R+R+RER+R+ DR+R++ER+R+R+++R++++ER+R++ER+R+ +R+
Sbjct: 189 DRSHERNRDRDRDRERDRDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDRE 243
Score = 62.4 bits (150), Expect = 3e-09
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 311 SHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKERE 370
+HSS + S D + R+R+R+R+R+RER+ DR+R+++R+RER+++RE
Sbjct: 176 AHSSASPPRSRSRDRSHERNRDRDRDRERDRDRDRDRDRERDRDRDRDRDRDRERDRDRE 235
Query: 371 QEKEREREKERERELERQREQRAREK 396
++++R+RE R + E+RA K
Sbjct: 236 RDRDRDREGPFRRS-DSFPERRAPRK 260
Score = 60.5 bits (145), Expect = 1e-08
Identities = 26/76 (34%), Positives = 49/76 (64%)
Query: 334 DEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRA 393
D E R+R+R+R+RER+R+ DR+R+++RER+R++ER+++++RE R +R R
Sbjct: 201 DRERDRDRDRDRDRERDRDRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPRK 260
Query: 394 REKELLAAKALEPSFL 409
+ + + P+ L
Sbjct: 261 GNTLYVYGEDMTPTLL 276
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 68.2 bits (165), Expect = 5e-11
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 321 ERMSGLSAER-LQMDEELRREREREREREREREADR-----EREKEREREREKEREQEKE 374
ER S +R L+ RER R R R R+R+ DR EREKE ER R ++R+ +KE
Sbjct: 314 ERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKE 373
Query: 375 R--EREKERERELERQREQRAR 394
R EREKERER ER +EQR+R
Sbjct: 374 RGNEREKERERSRERSKEQRSR 395
Score = 61.6 bits (148), Expect = 4e-09
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
ER S R + + R+RERE+E ER R DR+ +KER EREKERE+ +ER +E+
Sbjct: 334 ERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQR 393
Query: 381 RERELERQREQRARE 395
E+E ++ + ++
Sbjct: 394 SRGEVEEKKHKEDKD 408
Score = 60.1 bits (144), Expect = 1e-08
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
ER S ER + R + R+R+RERE + ER + R+R+ +KER E+E+ERE+
Sbjct: 326 ERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERS 385
Query: 381 RERELERQREQRAREKE 397
RER E++ EK+
Sbjct: 386 RERSKEQRSRGEVEEKK 402
Score = 56.6 bits (135), Expect = 1e-07
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Query: 319 HSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKERER- 377
H R + + D + RE+E ER R R+R+ D+ER ERE+ERE+ RE+ KE+
Sbjct: 336 HRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSR 395
Query: 378 -EKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTR 436
E E ++ E + ++R R+ + + K + S E + GK S + +
Sbjct: 396 GEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEK 455
Query: 437 AEKLKD 442
+ K K+
Sbjct: 456 SSKHKN 461
Score = 53.1 bits (126), Expect = 2e-06
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 319 HSERMSGLSAER-LQMDEELRREREREREREREREADREREKEREREREKEREQEKERER 377
H ER S R L RR R R RE + +RE ERE+ER++ + KERE+
Sbjct: 254 HVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREK 313
Query: 378 EKERERELER---QREQRAREK 396
E+ R R ++R +R R+RE+
Sbjct: 314 ERRRSRSIDRGLERRRSRSRER 335
Score = 45.8 bits (107), Expect = 2e-04
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 335 EELRREREREREREREREADREREKEREREREKEREQ------EKEREREKERERELERQ 388
EE+ R ER R R R R R R R RE ++E EREKER+R LER+
Sbjct: 249 EEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQR-LERE 307
Query: 389 REQRAREKELLAA--KALEPSFLPVAELHGLRGHATEERG 426
++R +E+ + + LE E H R + + +G
Sbjct: 308 AKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKG 347
Score = 38.5 bits (88), Expect = 0.039
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 346 EREREREADREREKEREREREKEREQEKEREREKERERELERQR----EQRAREKE 397
E+ ++RE +EK R+R R KER +++ K++ + +R+R EQ ++EK+
Sbjct: 483 EKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQ 538
Score = 38.1 bits (87), Expect = 0.051
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 335 EELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAR 394
+E E +R ER R R R R R + R +E +RELER++E++
Sbjct: 245 KEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRL 304
Query: 395 EKE 397
E+E
Sbjct: 305 ERE 307
Score = 37.4 bits (85), Expect = 0.088
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 324 SGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERER 383
SG +++ +RE +E+ R+R +ER +R+ K++ + +R R + E+
Sbjct: 473 SGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQ 532
Query: 384 ELERQREQRARE 395
E + ++ + E
Sbjct: 533 ESQEKQHKNKDE 544
Score = 37.0 bits (84), Expect = 0.11
Identities = 18/65 (27%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 334 DEELRREREREREREREREADREREKERE-REREKEREQEKE-REREKERERELERQREQ 391
D++ RR R+ +R+ ++E++ R R +ER+ R R + R K R R KE+ + + + ++
Sbjct: 406 DKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKE 465
Query: 392 RAREK 396
++ ++
Sbjct: 466 KSNKR 470
Score = 36.2 bits (82), Expect = 0.20
Identities = 11/63 (17%), Positives = 35/63 (55%)
Query: 335 EELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAR 394
+ + + ++RE +E+ R R KER +R+ +++ + ++ R + +E++ +++
Sbjct: 480 DSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQH 539
Query: 395 EKE 397
+ +
Sbjct: 540 KNK 542
Score = 35.0 bits (79), Expect = 0.44
Identities = 17/76 (22%), Positives = 34/76 (44%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
E+ S E + E+ R R+ +R+ ++E R + RER+ +R +
Sbjct: 391 EQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRS 450
Query: 381 RERELERQREQRAREK 396
R +E + + ++EK
Sbjct: 451 RSKEKSSKHKNESKEK 466
Score = 34.3 bits (77), Expect = 0.74
Identities = 18/79 (22%), Positives = 34/79 (43%)
Query: 309 ELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKE 368
E H S + + S + + + +E+ +R R R E+ ++RE
Sbjct: 432 ERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHS 491
Query: 369 REQEKEREREKERERELER 387
+EK R+R + +ER +R
Sbjct: 492 PSKEKSRKRSRSKERSHKR 510
Score = 33.9 bits (76), Expect = 0.97
Identities = 17/76 (22%), Positives = 34/76 (44%)
Query: 321 ERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKE 380
+R S E+ + +E+ +R R + EK ++RE +E+ ++R R KE
Sbjct: 446 KRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKE 505
Query: 381 RERELERQREQRAREK 396
R + + + +K
Sbjct: 506 RSHKRDHSDSKDQSDK 521
Score = 31.2 bits (69), Expect = 6.3
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 335 EELRREREREREREREREADREREKEREREREKEREQEKEREREKERERELERQREQRAR 394
+E + R R RER+ + +R R R KE+ K + KE+ + R Q R
Sbjct: 421 KEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEK-SSKHKNESKEKSNKRSRSGSQ-GR 478
Query: 395 EKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEK 439
+ +K E S P E R + E K + +++K
Sbjct: 479 TDSVEKSKKREHS--PSKEKSRKRSRSKERSHKRDHSDSKDQSDK 521
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,642,780
Number of Sequences: 37866
Number of extensions: 3913930
Number of successful extensions: 93243
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 1451
Number of HSP's that attempted gapping in prelim test: 30701
Number of HSP's gapped (non-prelim): 31730
length of query: 1217
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1103
effective length of database: 13,930,794
effective search space: 15365665782
effective search space used: 15365665782
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.