Guide to the Human Genome
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Name: FIP1L1 Sequence: fasta or formatted (594aa) NCBI GI: 40254978
Description:

FIP1 like 1 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {588aa} FIP1 like 1 isoform 2
alt prot {520aa} FIP1 like 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         34           1
 C cysteine            0.3          2           1
 D aspartate           7.2         43           3
 E glutamate          11.1         66           4
 F phenylalanine       2.5         15           2
 G glycine             7.4         44           2
 H histidine           2.5         15           1
 I isoleucine          2.9         17           1
 K lysine              5.2         31           2
 L leucine             4.2         25           2
 M methionine          0.5          3           1
 N asparagine          3.7         22           2
 P proline             9.9         59           4
 Q glutamine           2.0         12           2
 R arginine            9.8         58           3
 S serine              9.8         58           2
 T threonine           6.6         39           2
 V valine              4.7         28           1
 W tryptophan          1.2          7           1
 Y tyrosine            2.7         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FIP1 like 1 isoform 1 
FIP1L1                0.958   FIP1 like 1 isoform 2 
FIP1L1                0.840   FIP1 like 1 isoform 3 
RBM25                 0.057   RNA binding motif protein 25 
ZC3H13                0.056   zinc finger CCCH-type containing 13 
RNASEN                0.052   ribonuclease III, nuclear isoform 2 
LOC100286959          0.049   PREDICTED: hypothetical protein XP_002343921 
LOC100131202          0.049   PREDICTED: hypothetical protein 
PRPF38B               0.048   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
LOC100131202          0.047   PREDICTED: hypothetical protein 
RNASEN                0.044   ribonuclease III, nuclear isoform 1 
KIAA0182              0.043   genetic suppressor element 1 isoform 2 
KIAA0182              0.043   genetic suppressor element 1 isoform 1 
ZC3H18                0.043   zinc finger CCCH-type containing 18 
LOC100288837          0.042   PREDICTED: hypothetical protein XP_002343931, parti...
SFRS12                0.042   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.042   splicing factor, arginine/serine-rich 12 isoform b [...
LOC100134067          0.039   PREDICTED: hypothetical protein 
LOC100133599          0.038   PREDICTED: hypothetical protein 
DIDO1                 0.038   death inducer-obliterator 1 isoform c 
RBBP6                 0.038   retinoblastoma-binding protein 6 isoform 1 
LOC100133599          0.037   PREDICTED: hypothetical protein 
PHF3                  0.037   PHD finger protein 3 
YLPM1                 0.036   YLP motif containing 1 
LOC100170229          0.035   hypothetical protein LOC100170229 
CROP                  0.035   cisplatin resistance-associated overexpressed protei...
CROP                  0.035   cisplatin resistance-associated overexpressed protei...
DDX23                 0.034   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
RBBP6                 0.034   retinoblastoma-binding protein 6 isoform 2 
BAT2D1                0.034   HBxAg transactivated protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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