Search of human proteins with 40804742

Search of human proteins with 40804742

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40804742 zinc finger CCCH-type containing 14 isoform 1 [Homo
sapiens]
         (736 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40804742 zinc finger CCCH-type containing 14 isoform 1 [Homo ...  1494   0.0  
gi|231570121 zinc finger CCCH-type containing 14 isoform 5 [Homo...  1488   0.0  
gi|231570186 zinc finger CCCH-type containing 14 isoform 6 [Homo...  1472   0.0  
gi|50233812 zinc finger CCCH-type containing 14 isoform 2 [Homo ...   837   0.0  
gi|50233814 zinc finger CCCH-type containing 14 isoform 3 [Homo ...   819   0.0  
gi|50541967 zinc finger CCCH-type containing 14 isoform 4 [Homo ...   353   3e-97
gi|125987603 cleavage and polyadenylation specific factor 4, 30k...    45   2e-04
gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa...    45   2e-04
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]         40   0.006
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ...    39   0.023
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ...    39   0.023
gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]                39   0.023
gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens]         38   0.029
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa...    37   0.050
gi|223972704 hypothetical protein LOC284418 [Homo sapiens]             37   0.066
gi|33667044 ABI gene family, member 3 (NESH) binding protein [Ho...    37   0.066
gi|32880199 makorin ring finger protein 2 [Homo sapiens]               37   0.066
gi|24431935 reticulon 4 isoform A [Homo sapiens]                       37   0.086
gi|239748340 PREDICTED: hypothetical protein XP_002346633 [Homo ...    37   0.086
gi|193788659 cleavage and polyadenylation specific factor 4-like...    37   0.086
gi|34304336 ring finger protein 8 isoform 2 [Homo sapiens]             36   0.11 
gi|4504867 ring finger protein 8 isoform 1 [Homo sapiens]              36   0.11 
gi|104526627 triadin [Homo sapiens]                                    36   0.15 
gi|21536423 amphiphysin isoform 2 [Homo sapiens]                       35   0.19 
gi|4502081 amphiphysin isoform 1 [Homo sapiens]                        35   0.19 
gi|118766347 zinc finger CCCH-type domain containing 6 [Homo sap...    35   0.19 
gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens]    35   0.19 
gi|91982772 mucin 17 [Homo sapiens]                                    35   0.25 
gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]      35   0.33 
gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]         35   0.33 

>gi|40804742 zinc finger CCCH-type containing 14 isoform 1 [Homo
           sapiens]
          Length = 736

 Score = 1494 bits (3869), Expect = 0.0
 Identities = 736/736 (100%), Positives = 736/736 (100%)

Query: 1   MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI 60
           MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI
Sbjct: 1   MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI 60

Query: 61  RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP 120
           RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP
Sbjct: 61  RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP 120

Query: 121 SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD 180
           SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD
Sbjct: 121 SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD 180

Query: 181 LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS 240
           LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS
Sbjct: 181 LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS 240

Query: 241 IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS 300
           IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS
Sbjct: 241 IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS 300

Query: 301 SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS 360
           SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS
Sbjct: 301 SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS 360

Query: 361 EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD 420
           EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD
Sbjct: 361 EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD 420

Query: 421 SVEKNQGTQQRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVV 480
           SVEKNQGTQQRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVV
Sbjct: 421 SVEKNQGTQQRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVV 480

Query: 481 APNQESGMKTADSLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMC 540
           APNQESGMKTADSLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMC
Sbjct: 481 APNQESGMKTADSLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMC 540

Query: 541 FEGMKPVNQTAASNKGLRGLLHPQQLHLLSRQLEDPNGSFSNAEMSELSVAQKPEKLLER 600
           FEGMKPVNQTAASNKGLRGLLHPQQLHLLSRQLEDPNGSFSNAEMSELSVAQKPEKLLER
Sbjct: 541 FEGMKPVNQTAASNKGLRGLLHPQQLHLLSRQLEDPNGSFSNAEMSELSVAQKPEKLLER 600

Query: 601 CKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRR 660
           CKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRR
Sbjct: 601 CKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRR 660

Query: 661 IPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTIN 720
           IPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTIN
Sbjct: 661 IPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTIN 720

Query: 721 VPPRHALKWIRPQTSE 736
           VPPRHALKWIRPQTSE
Sbjct: 721 VPPRHALKWIRPQTSE 736


>gi|231570121 zinc finger CCCH-type containing 14 isoform 5 [Homo
           sapiens]
          Length = 735

 Score = 1488 bits (3853), Expect = 0.0
 Identities = 735/736 (99%), Positives = 735/736 (99%), Gaps = 1/736 (0%)

Query: 1   MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI 60
           MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI
Sbjct: 1   MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI 60

Query: 61  RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP 120
           RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP
Sbjct: 61  RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP 120

Query: 121 SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD 180
           SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD
Sbjct: 121 SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD 180

Query: 181 LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS 240
           LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS
Sbjct: 181 LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS 240

Query: 241 IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS 300
           IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS
Sbjct: 241 IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS 300

Query: 301 SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS 360
           SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS
Sbjct: 301 SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS 360

Query: 361 EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD 420
           EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD
Sbjct: 361 EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD 420

Query: 421 SVEKNQGTQQRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVV 480
           SVEKNQGTQQRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVV
Sbjct: 421 SVEKNQGTQQRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVV 480

Query: 481 APNQESGMKTADSLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMC 540
           APNQESGMKTADSLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMC
Sbjct: 481 APNQESGMKTADSLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMC 540

Query: 541 FEGMKPVNQTAASNKGLRGLLHPQQLHLLSRQLEDPNGSFSNAEMSELSVAQKPEKLLER 600
           FEGMKPVNQTAASNKGLRGLLHPQQLHLLSRQLEDPNGSFSNAEMSELSVAQKPEKLLER
Sbjct: 541 FEGMKPVNQTAASNKGLRGLLHPQQLHLLSRQLEDPNGSFSNAEMSELSVAQKPEKLLER 600

Query: 601 CKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRR 660
           CKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRR
Sbjct: 601 CKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRR 660

Query: 661 IPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTIN 720
           IPVLSPKP VAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTIN
Sbjct: 661 IPVLSPKP-VAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTIN 719

Query: 721 VPPRHALKWIRPQTSE 736
           VPPRHALKWIRPQTSE
Sbjct: 720 VPPRHALKWIRPQTSE 735


>gi|231570186 zinc finger CCCH-type containing 14 isoform 6 [Homo
           sapiens]
          Length = 730

 Score = 1472 bits (3811), Expect = 0.0
 Identities = 730/736 (99%), Positives = 730/736 (99%), Gaps = 6/736 (0%)

Query: 1   MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI 60
           MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI
Sbjct: 1   MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI 60

Query: 61  RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP 120
           RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP
Sbjct: 61  RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP 120

Query: 121 SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD 180
           SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD
Sbjct: 121 SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD 180

Query: 181 LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS 240
           LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS
Sbjct: 181 LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS 240

Query: 241 IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS 300
           IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS
Sbjct: 241 IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS 300

Query: 301 SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS 360
           SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS
Sbjct: 301 SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS 360

Query: 361 EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD 420
           EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD
Sbjct: 361 EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD 420

Query: 421 SVEKNQGTQQRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVV 480
           SVEKNQGTQQRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVV
Sbjct: 421 SVEKNQGTQQRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVV 480

Query: 481 APNQESGMKTADSLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMC 540
           APNQESGMKTADSLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMC
Sbjct: 481 APNQESGMKTADSLRVLSGHLMQTRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMC 540

Query: 541 FEGMKPVNQTAASNKGLRGLLHPQQLHLLSRQLEDPNGSFSNAEMSELSVAQKPEKLLER 600
           FEGMKPVNQTAASNKGLRGLLHPQQLHLLSRQLEDP     NAEMSELSVAQKPEKLLER
Sbjct: 541 FEGMKPVNQTAASNKGLRGLLHPQQLHLLSRQLEDP-----NAEMSELSVAQKPEKLLER 595

Query: 601 CKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRR 660
           CKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRR
Sbjct: 596 CKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRR 655

Query: 661 IPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTIN 720
           IPVLSPKP VAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTIN
Sbjct: 656 IPVLSPKP-VAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTIN 714

Query: 721 VPPRHALKWIRPQTSE 736
           VPPRHALKWIRPQTSE
Sbjct: 715 VPPRHALKWIRPQTSE 730


>gi|50233812 zinc finger CCCH-type containing 14 isoform 2 [Homo
           sapiens]
          Length = 579

 Score =  837 bits (2163), Expect = 0.0
 Identities = 426/426 (100%), Positives = 426/426 (100%)

Query: 1   MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI 60
           MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI
Sbjct: 1   MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQDQMTEDLSLFLGNNTI 60

Query: 61  RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP 120
           RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP
Sbjct: 61  RFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIP 120

Query: 121 SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD 180
           SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD
Sbjct: 121 SARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKPEPDD 180

Query: 181 LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS 240
           LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS
Sbjct: 181 LIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNS 240

Query: 241 IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS 300
           IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS
Sbjct: 241 IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVS 300

Query: 301 SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS 360
           SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS
Sbjct: 301 SVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAIS 360

Query: 361 EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD 420
           EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD
Sbjct: 361 EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD 420

Query: 421 SVEKNQ 426
           SVEKNQ
Sbjct: 421 SVEKNQ 426



 Score =  347 bits (889), Expect = 3e-95
 Identities = 153/156 (98%), Positives = 154/156 (98%), Gaps = 1/156 (0%)

Query: 581 SNAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPN 640
           + AEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPN
Sbjct: 425 NQAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPN 484

Query: 641 CKYDAKCTKPDCPFTHVSRRIPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKH 700
           CKYDAKCTKPDCPFTHVSRRIPVLSPKP VAPPAPPSSSQLCRYFPACKKMECPFYHPKH
Sbjct: 485 CKYDAKCTKPDCPFTHVSRRIPVLSPKP-VAPPAPPSSSQLCRYFPACKKMECPFYHPKH 543

Query: 701 CRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE 736
           CRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
Sbjct: 544 CRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE 579


>gi|50233814 zinc finger CCCH-type containing 14 isoform 3 [Homo
           sapiens]
          Length = 571

 Score =  819 bits (2115), Expect = 0.0
 Identities = 417/417 (100%), Positives = 417/417 (100%)

Query: 35  MVMVANKKSQDQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSN 94
           MVMVANKKSQDQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSN
Sbjct: 1   MVMVANKKSQDQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSN 60

Query: 95  VPSNKSNFSRGDERRHEAAVPPLAIPSARPEKRDSRVSTSSQESKTTNVRQTYDDGAATR 154
           VPSNKSNFSRGDERRHEAAVPPLAIPSARPEKRDSRVSTSSQESKTTNVRQTYDDGAATR
Sbjct: 61  VPSNKSNFSRGDERRHEAAVPPLAIPSARPEKRDSRVSTSSQESKTTNVRQTYDDGAATR 120

Query: 155 LMSTVKPLREPAPSEDVIDIKPEPDDLIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEI 214
           LMSTVKPLREPAPSEDVIDIKPEPDDLIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEI
Sbjct: 121 LMSTVKPLREPAPSEDVIDIKPEPDDLIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEI 180

Query: 215 YRPPASRNADSGVHLNRLQFQQQQNSIHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYS 274
           YRPPASRNADSGVHLNRLQFQQQQNSIHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYS
Sbjct: 181 YRPPASRNADSGVHLNRLQFQQQQNSIHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYS 240

Query: 275 PFFRNNSEKMSMEDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSV 334
           PFFRNNSEKMSMEDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSV
Sbjct: 241 PFFRNNSEKMSMEDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSV 300

Query: 335 PAKPERRPSLPPSKQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEEL 394
           PAKPERRPSLPPSKQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEEL
Sbjct: 301 PAKPERRPSLPPSKQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEEL 360

Query: 395 LAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMSQ 451
           LAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMSQ
Sbjct: 361 LAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMSQ 417



 Score =  358 bits (920), Expect = 8e-99
 Identities = 163/177 (92%), Positives = 163/177 (92%), Gaps = 4/177 (2%)

Query: 564 QQLHLLSRQLEDP----NGSFSNAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPI 619
           QQ  LLSR   DP        S AEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPI
Sbjct: 395 QQRQLLSRLQIDPVMAETLQMSQAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPI 454

Query: 620 SPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPAVAPPAPPSSS 679
           SPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPAVAPPAPPSSS
Sbjct: 455 SPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPAVAPPAPPSSS 514

Query: 680 QLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE 736
           QLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
Sbjct: 515 QLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE 571


>gi|50541967 zinc finger CCCH-type containing 14 isoform 4 [Homo
           sapiens]
          Length = 306

 Score =  353 bits (906), Expect = 3e-97
 Identities = 170/212 (80%), Positives = 175/212 (82%), Gaps = 17/212 (8%)

Query: 534 DQEEDMCFEGMKPVNQTAASNKGLRGLLH-----PQQLHLLSRQLEDP----NGSFSNAE 584
           DQEED         +Q+  ++  + G L       QQ  LLSR   DP        S AE
Sbjct: 103 DQEEDT-------ESQSRTTDVKIIGFLRNVEKGTQQRQLLSRLQIDPVMAETLQMSQAE 155

Query: 585 MSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYD 644
           MSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYD
Sbjct: 156 MSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYD 215

Query: 645 AKCTKPDCPFTHVSRRIPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFN 704
           AKCTKPDCPFTHVSRRIPVLSPKP VAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFN
Sbjct: 216 AKCTKPDCPFTHVSRRIPVLSPKP-VAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFN 274

Query: 705 TQCTRPDCTFYHPTINVPPRHALKWIRPQTSE 736
           TQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
Sbjct: 275 TQCTRPDCTFYHPTINVPPRHALKWIRPQTSE 306



 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 28/31 (90%), Positives = 29/31 (93%), Gaps = 2/31 (6%)

Query: 421 SVEKNQGTQQRQLLSRLQIDPVMAETLQMSQ 451
           +VEK  GTQQRQLLSRLQIDPVMAETLQMSQ
Sbjct: 125 NVEK--GTQQRQLLSRLQIDPVMAETLQMSQ 153


>gi|125987603 cleavage and polyadenylation specific factor 4, 30kDa
           isoform 2 [Homo sapiens]
          Length = 244

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 31/129 (24%)

Query: 601 CKYW--PACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVS 658
           CK+W    CK GD+C + H     K  P C F  K            +C+  +CPF H+ 
Sbjct: 68  CKHWLRGLCKKGDQCEFLHEYDMTK-MPECYFYSKF----------GECSNKECPFLHID 116

Query: 659 RRIPVLSPKPAVAPPAPPSSSQLCRYFPAC-----KKMECPFYHPKHCRFNTQCTRPDCT 713
               +           P      C++ P C     +++ C  Y    C        P C 
Sbjct: 117 PESKI--------KDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCP-----EGPSCK 163

Query: 714 FYHPTINVP 722
           F HP   +P
Sbjct: 164 FMHPRFELP 172


>gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa
           isoform 1 [Homo sapiens]
          Length = 269

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 31/129 (24%)

Query: 601 CKYW--PACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVS 658
           CK+W    CK GD+C + H     K  P C F  K            +C+  +CPF H+ 
Sbjct: 68  CKHWLRGLCKKGDQCEFLHEYDMTK-MPECYFYSKF----------GECSNKECPFLHID 116

Query: 659 RRIPVLSPKPAVAPPAPPSSSQLCRYFPAC-----KKMECPFYHPKHCRFNTQCTRPDCT 713
               +           P      C++ P C     +++ C  Y    C        P C 
Sbjct: 117 PESKI--------KDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCP-----EGPSCK 163

Query: 714 FYHPTINVP 722
           F HP   +P
Sbjct: 164 FMHPRFELP 172


>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
          Length = 948

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 37/142 (26%)

Query: 553 SNKGLRGLLHPQQLHLLSRQLEDPNGSFSNAEMSEL---------SVAQKPEKLLERCKY 603
           S+ G R LL   +L        DP GS S +  S              Q+ EK  E C Y
Sbjct: 624 SDAGSRPLLRTGRL--------DPAGSCSRSLASRAVQRSLAIIRQARQRREKRKEYCMY 675

Query: 604 WPA---CKNGDECAYHHP---ISPCKAFPN--CKFAE-KCLFVH-------PNCKYDAK- 646
           +     C  G+ C Y H    ++ C  F    CK  +  C F H       P C Y  K 
Sbjct: 676 YNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKG 735

Query: 647 -CTKPDCPFTH--VSRRIPVLS 665
            C+  +CP++H  VSR+  V S
Sbjct: 736 ICSNSNCPYSHVYVSRKAEVCS 757


>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
           [Homo sapiens]
          Length = 916

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 32/234 (13%)

Query: 193 PLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNSIHAAKQLDMQSS 252
           PL   +P +T++    +P +E  +              ++Q +  +  I   K  D +S 
Sbjct: 422 PLYTHRPPITISSKIQKPKVEAPKL-------------KVQHKFVEEIIEETKVEDEKSE 468

Query: 253 WVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVSSVVKVK-----K 307
                  + E E+  S++E          E+   E+E    +K PV ++  +VK     K
Sbjct: 469 MEEALTAITE-ELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEK 527

Query: 308 FNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAISEAQESVT 367
              +G+EEEE++D G+++       S     E+  S    +   +    +A +E +E+  
Sbjct: 528 EEEEGQEEEEEEDEGAKSDQAEEGGS-----EKEGSSEKEEGEQEEGETEAEAEGEEAEA 582

Query: 368 KTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGDS 421
           K        +++ +        ++EEL+A+    +    +   P    E KG S
Sbjct: 583 K--------EEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKS 628


>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
           [Homo sapiens]
          Length = 540

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 32/234 (13%)

Query: 193 PLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNSIHAAKQLDMQSS 252
           PL   +P +T++    +P +E  +              ++Q +  +  I   K  D +S 
Sbjct: 46  PLYTHRPPITISSKIQKPKVEAPKL-------------KVQHKFVEEIIEETKVEDEKSE 92

Query: 253 WVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVSSVVKVK-----K 307
                  + E E+  S++E          E+   E+E    +K PV ++  +VK     K
Sbjct: 93  MEEALTAITE-ELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEK 151

Query: 308 FNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAISEAQESVT 367
              +G+EEEE++D G+++       S     E+  S    +   +    +A +E +E+  
Sbjct: 152 EEEEGQEEEEEEDEGAKSDQAEEGGS-----EKEGSSEKEEGEQEEGETEAEAEGEEAEA 206

Query: 368 KTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGDS 421
           K        +++ +        ++EEL+A+    +    +   P    E KG S
Sbjct: 207 K--------EEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKS 252


>gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]
          Length = 895

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 2/134 (1%)

Query: 252 SWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVSSVVKVKKFNHD 311
           S+ Y  G   +P V  + +  Y   F  N+ +   + E     + P        ++ + +
Sbjct: 662 SFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSEE 721

Query: 312 GEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLIL--KAISEAQESVTKT 369
            EEEE D+D    TG I+ + S    P    S+P   +  + + L  K I EA +     
Sbjct: 722 EEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSETP 781

Query: 370 TNYSTVPQKQTLPV 383
             ++ +P+K+T  V
Sbjct: 782 QLFTVLPEKRTATV 795


>gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens]
          Length = 291

 Score = 38.1 bits (87), Expect = 0.029
 Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 30/215 (13%)

Query: 465 RSFILKKPKLSEEVVVAPNQESGMKTADSLRVLSGHLMQTRDLVQPDKPASPKFIVTLDG 524
           +S + +K +  +  V + N     ++ D+        +Q R++      A P+     +G
Sbjct: 61  KSSLHRKSRSKDYDVYSDNDICSQESEDNFAKELQQYIQAREMANA---AQPEESTKKEG 117

Query: 525 VPSPPGYMSDQEEDMCFEGMKPVNQT-------AASNKGLRGLLHPQQLHLLSRQLEDPN 577
           V   P     + +++   G K   Q           NKG   LL          + ++  
Sbjct: 118 VKDTPQAAKQKNKNLK-AGHKNGKQKKMKRKWPGPGNKGSNALLRNSGSQEEDGKPKEKQ 176

Query: 578 GSFSNAEMSELSVAQKPEKLLERCKYW--PACKNGDECAYHHPISPCKAFPNCKF----- 630
              S A +++ +V +K +++   CKY+    C  GD+C + H     K    CKF     
Sbjct: 177 QHLSQAFINQHTVERKGKQI---CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGY 233

Query: 631 ---AEKCLFVHPN--CKY---DAKCTKPD-CPFTH 656
               E CL++H    CK+     KC + + C F+H
Sbjct: 234 CTRGENCLYLHNEYPCKFYHTGTKCYQGEYCKFSH 268


>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
           sapiens]
          Length = 699

 Score = 37.4 bits (85), Expect = 0.050
 Identities = 62/272 (22%), Positives = 104/272 (38%), Gaps = 53/272 (19%)

Query: 279 NNSEKMSMEDENFRKRKLPVVSSVV-----------KVKKFNHDGEEEEEDDDYGSRTGS 327
           ++SE+ S +D+   ++K PV   V            K K  + D +   ED+   ++   
Sbjct: 127 SSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPK 186

Query: 328 IS-----SSVSVPAKPERR-PSLPPSKQANKNLILKAIS---EAQESVTKTTNYSTVPQK 378
           I+     +    P KP R  P +   K A+ +    + S   +++E     T   TVP+K
Sbjct: 187 ITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKK 246

Query: 379 QTLPVAP--------RTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGDSV-------- 422
           Q +  AP        R  +S E+  ++  + Q +      P+K +     SV        
Sbjct: 247 QVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKK------PMKNKPGPYSSVPPPSAPPP 300

Query: 423 EKNQGTQQRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVVAP 482
           +K+ GTQ  +     Q      + ++ S+D  D      +D+ S   KKP     V  A 
Sbjct: 301 KKSLGTQPPKKAVEKQ------QPVESSEDSSD-----ESDSSSEEEKKPPTKAVVSKAT 349

Query: 483 NQESGMKTADSLRVLSGHLMQTRDLVQPDKPA 514
            +    K A      S     + D   P KPA
Sbjct: 350 TKPPPAKKAAESSSDSSDSDSSEDDEAPSKPA 381



 Score = 31.2 bits (69), Expect = 3.6
 Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 13/136 (9%)

Query: 293 KRKLPVVSSVVK-VKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQAN 351
           +RKL     V K  KK     + E+  ++     G  +   +VPAK   R  LPP K A 
Sbjct: 65  ERKLQANGPVAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAK---RVGLPPGKAAA 121

Query: 352 KNLILKAISEAQESVTKTTNYSTVPQKQTLPVA---------PRTRTSQEELLAEVVQGQ 402
           K     +  E+ +   +        QK   P A          ++  S  +  +E    +
Sbjct: 122 KASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPK 181

Query: 403 SRTPRISPPIKEEETK 418
           ++ P+I+P   + +TK
Sbjct: 182 NQKPKITPVTVKAQTK 197


>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
          Length = 922

 Score = 37.0 bits (84), Expect = 0.066
 Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 24/172 (13%)

Query: 333 SVPAKPERRPSLP-PSKQANK--------NLILKAISEAQESVTKTTNYSTVPQKQTLPV 383
           +VPA  ++ P++P PS++A+         + +     +      K  +  T+PQK   P 
Sbjct: 464 AVPAPSQKAPAIPAPSRKASAASASPRKASAVPAPPQKTPPPSQKAPSVPTIPQKAVSPT 523

Query: 384 APRTRT------SQEELLAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRL 437
           AP+ ++      SQ+ L     + Q     +SPP    +  GD      G   R +L R 
Sbjct: 524 APKKKSLLLPAPSQKALPTSPTEYQM---ALSPPASRGKLPGDFDVLPTGIPGRAVLERS 580

Query: 438 QI----DPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVVAPNQE 485
           Q     +PV+    Q   D  +M +   +    F + K K S++++++  +E
Sbjct: 581 QSGGKPEPVVTVRTQ-ETDVVEMTTQAKSPESPFTVTK-KESKDILISQTKE 630


>gi|33667044 ABI gene family, member 3 (NESH) binding protein [Homo
           sapiens]
          Length = 1075

 Score = 37.0 bits (84), Expect = 0.066
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 5/123 (4%)

Query: 335 PAKPER--RPSLPPSKQANKNLILKAISEAQESVTKTTNYST-VPQKQTLPVAPRTRTSQ 391
           P KP+   RP +P ++   K +  +  ++ + S +   +Y+T  P+   LP  P    SQ
Sbjct: 541 PPKPKTSPRPRIPQTQPVPK-VPQRVTAKPKTSPSPEVSYTTPAPKDVLLPHKPYPEVSQ 599

Query: 392 EELLAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMSQ 451
            E      +G    P ISP   +EE +    E +Q TQ+    +++     +A+T Q   
Sbjct: 600 SEPAPLETRGIPFIPMISPSPSQEELQTTLEETDQSTQE-PFTTKIPRTTELAKTTQAPH 658

Query: 452 DYY 454
            +Y
Sbjct: 659 RFY 661


>gi|32880199 makorin ring finger protein 2 [Homo sapiens]
          Length = 416

 Score = 37.0 bits (84), Expect = 0.066
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 601 CKYWP--ACKNGDECAYHHPISPCKAFPNCKFAEK--CLFVHPNCKYDAKCTKPDCPFTH 656
           C+Y+    C+ G +C + H ++  K    CK+ +K  C +    C+YD   T+P      
Sbjct: 8   CRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAY-GTRCRYDH--TRPSAAAGG 64

Query: 657 VSRRIPVLSPKPAVAPPAPPS 677
               +    P PA   P PPS
Sbjct: 65  AVGTMAHSVPSPAFHSPHPPS 85


>gi|24431935 reticulon 4 isoform A [Homo sapiens]
          Length = 1192

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 16/169 (9%)

Query: 335 PAKPERRPSLPPSKQANKNL--ILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTS-- 390
           PA P   P+ P  + ++ ++   L A+  A E V +++      +   L   P    S  
Sbjct: 166 PAAPPSTPAAPKRRGSSGSVDETLFALPAASEPVIRSS-----AENMDLKEQPGNTISAG 220

Query: 391 QEELLAEVVQGQSRTPRISP----PIKEEETKGD--SVEKNQGTQQRQLLSRLQIDPVMA 444
           QE+  + +++  +  P +SP      KE E  G+  +V   +GT Q  +    +     A
Sbjct: 221 QEDFPSVLLETAASLPSLSPLSAASFKEHEYLGNLSTVLPTEGTLQENVSEASKEVSEKA 280

Query: 445 ETLQMSQDYYDMESMVHADTRSFILKKPKLSEEVVVA-PNQESGMKTAD 492
           +TL + +D  +   + +++  S     PK    V+VA P +E  +K  D
Sbjct: 281 KTLLIDRDLTEFSELEYSEMGSSFSVSPKAESAVIVANPREEIIVKNKD 329


>gi|239748340 PREDICTED: hypothetical protein XP_002346633 [Homo
           sapiens]
          Length = 465

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 40/211 (18%), Positives = 80/211 (37%), Gaps = 32/211 (15%)

Query: 278 RNNSEKMSMEDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAK 337
           +   EK    D+ +++R       + + +    D EE+E+D+D+          V VP K
Sbjct: 158 KREEEKQKHLDKIYQERASQAEREMQQTEALG-DAEEDEDDEDF----------VEVPEK 206

Query: 338 PERRPSLPPSKQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAE 397
               P +P   +    L                     P+K T+    RTRT  +E +++
Sbjct: 207 EGYEPHIPDHLRPEYGL------------------EAAPEKDTVVRCLRTRTRMDEEVSD 248

Query: 398 VVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLL---SRLQIDPVMAETLQMSQDYY 454
                ++  ++  P+    +   S    +  + ++L    +R  + P   +     Q+  
Sbjct: 249 PTSAAAQLRQLPGPLASPSSASPSRALPEPQEAQKLAAERARAPVVPYGVDLHYWGQELP 308

Query: 455 DMESMVHADTRSFILKKPKLSEEVVVAPNQE 485
               +V +D++    K  ++ EEVV A   E
Sbjct: 309 TAGKIVKSDSQHRFWKPSEVEEEVVNADISE 339


>gi|193788659 cleavage and polyadenylation specific factor 4-like
           [Homo sapiens]
          Length = 179

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 26/109 (23%), Positives = 34/109 (31%), Gaps = 40/109 (36%)

Query: 601 CKYW--PACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVS 658
           CK+W    CK GD C + H     +  P C F  K             C+  +C F HV 
Sbjct: 68  CKHWLRGLCKKGDHCKFLHQYDLTR-MPECYFYSKF----------GDCSNKECSFLHVK 116

Query: 659 RRIPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQC 707
                                      PA K  +CP+Y    C+    C
Sbjct: 117 ---------------------------PAFKSQDCPWYDQGFCKDGPLC 138


>gi|34304336 ring finger protein 8 isoform 2 [Homo sapiens]
          Length = 448

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)

Query: 361 EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD 420
           EA  +V K T       K+ + +    +  Q +L AE  Q Q+R  ++    +EEE    
Sbjct: 268 EAVMNVKKQTQKGN--SKKVVQMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQ 325

Query: 421 SVEKNQGTQ--QRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEV 478
            +E  QG +  ++QL   LQ    + E L  S+   D E+++ A  +   L++ K  +E 
Sbjct: 326 GLEIAQGEKDLKQQLAQALQEHWALMEELNRSKK--DFEAIIQAKNKE--LEQTKEEKEK 381

Query: 479 VVAPNQE 485
           + A  +E
Sbjct: 382 MQAQKEE 388


>gi|4504867 ring finger protein 8 isoform 1 [Homo sapiens]
          Length = 485

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)

Query: 361 EAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPPIKEEETKGD 420
           EA  +V K T       K+ + +    +  Q +L AE  Q Q+R  ++    +EEE    
Sbjct: 268 EAVMNVKKQTQKGN--SKKVVQMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQ 325

Query: 421 SVEKNQGTQ--QRQLLSRLQIDPVMAETLQMSQDYYDMESMVHADTRSFILKKPKLSEEV 478
            +E  QG +  ++QL   LQ    + E L  S+   D E+++ A  +   L++ K  +E 
Sbjct: 326 GLEIAQGEKDLKQQLAQALQEHWALMEELNRSKK--DFEAIIQAKNKE--LEQTKEEKEK 381

Query: 479 VVAPNQE 485
           + A  +E
Sbjct: 382 MQAQKEE 388


>gi|104526627 triadin [Homo sapiens]
          Length = 729

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 55/271 (20%), Positives = 103/271 (38%), Gaps = 35/271 (12%)

Query: 170 DVIDIKPEPDDLIDEDLNF--VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRNADSGV 227
           D+I  + E DD  DED +   + E PL +K+     T    +P  +I      +  + G 
Sbjct: 112 DIISSEDEEDDDGDEDTDKGEIDEPPLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKGK 171

Query: 228 HLNRLQFQQQQNSIHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSME 287
              R + + ++ + H  K   ++     ET  L +       E+  +     + EK   E
Sbjct: 172 EKVREKEKPEKKATHKEK---IEKKEKPETKTLAK-------EQKKAKTAEKSEEKTKKE 221

Query: 288 DENFRKRKLPVVSSVVKVKKFNHDGEEEEED------------DDYGSRTGSISSSVSVP 335
            +  ++ K+   ++ VK  +      +E+ED            D Y      I   V   
Sbjct: 222 VKGGKQEKVKQTAAKVKEVQKTPSKPKEKEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGD 281

Query: 336 AKPERRPSLP---PSKQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQE 392
            KP + P++P   P++QA++        E +E   K        + +        + S++
Sbjct: 282 LKPGQSPAIPPPLPTEQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEK 341

Query: 393 ELLAEVVQGQSRTPRISPPIKEEETKGDSVE 423
           E   +V + +        P K  ETK  +V+
Sbjct: 342 ETAIDVEKKE--------PGKASETKQGTVK 364


>gi|21536423 amphiphysin isoform 2 [Homo sapiens]
          Length = 653

 Score = 35.4 bits (80), Expect = 0.19
 Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 12/201 (5%)

Query: 228 HLNRLQFQQQQNS--IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMS 285
           HL  LQ  ++++   I  A++   ++  V+E   +   E L SL      F+ N  + +S
Sbjct: 151 HLEALQSSKRKDESRISKAEEEFQKAQKVFEEFNVDLQEELPSLWSRRVGFYVNTFKNVS 210

Query: 286 MEDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLP 345
             +  F K    +   + +V     D   ++     G+ + S    ++    P   PS  
Sbjct: 211 SLEAKFHKEIAVLCHKLYEVMTKLGDQHADKAFTIQGAPSDSGPLRIAKTPSPPEEPSPL 270

Query: 346 PSKQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRT 405
           PS  A+ N  L   S A       +     P    LP    T+  Q+E +    +  +  
Sbjct: 271 PSPTASPNHTLAPASPAPARPRSPSQTRKGPPVPPLPKVTPTKELQQENIISFFE-DNFV 329

Query: 406 PRIS---------PPIKEEET 417
           P IS         P +K+EET
Sbjct: 330 PEISVTTPSQNEVPEVKKEET 350


>gi|4502081 amphiphysin isoform 1 [Homo sapiens]
          Length = 695

 Score = 35.4 bits (80), Expect = 0.19
 Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 12/201 (5%)

Query: 228 HLNRLQFQQQQNS--IHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMS 285
           HL  LQ  ++++   I  A++   ++  V+E   +   E L SL      F+ N  + +S
Sbjct: 151 HLEALQSSKRKDESRISKAEEEFQKAQKVFEEFNVDLQEELPSLWSRRVGFYVNTFKNVS 210

Query: 286 MEDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLP 345
             +  F K    +   + +V     D   ++     G+ + S    ++    P   PS  
Sbjct: 211 SLEAKFHKEIAVLCHKLYEVMTKLGDQHADKAFTIQGAPSDSGPLRIAKTPSPPEEPSPL 270

Query: 346 PSKQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRT 405
           PS  A+ N  L   S A       +     P    LP    T+  Q+E +    +  +  
Sbjct: 271 PSPTASPNHTLAPASPAPARPRSPSQTRKGPPVPPLPKVTPTKELQQENIISFFE-DNFV 329

Query: 406 PRIS---------PPIKEEET 417
           P IS         P +K+EET
Sbjct: 330 PEISVTTPSQNEVPEVKKEET 350


>gi|118766347 zinc finger CCCH-type domain containing 6 [Homo
           sapiens]
          Length = 1189

 Score = 35.4 bits (80), Expect = 0.19
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 16/72 (22%)

Query: 601 CKYW--PACKNGDECAYHHPISPCKAFPNCKF--------AEKCLFVHPN--CKY---DA 645
           CKY+    C  GD+C + H     K    CKF         E C+++H    CK+    A
Sbjct: 278 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 337

Query: 646 KCTKPD-CPFTH 656
           KC + D C F+H
Sbjct: 338 KCYQGDNCKFSH 349



 Score = 33.5 bits (75), Expect = 0.73
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 5/57 (8%)

Query: 595 EKLLERCKYWPA--CKNGDECAYHHPISPCKAF---PNCKFAEKCLFVHPNCKYDAK 646
           EK  E CK++    C  G+ C Y H   PCK +     C   + C F H +   + K
Sbjct: 301 EKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGAKCYQGDNCKFSHDDLTKETK 357


>gi|154240686 FYVE, RhoGEF and PH domain containing 6 [Homo sapiens]
          Length = 1430

 Score = 35.4 bits (80), Expect = 0.19
 Identities = 65/274 (23%), Positives = 103/274 (37%), Gaps = 35/274 (12%)

Query: 168 SEDVIDIKPEPDDLIDEDLNFVQENP-LSQKKPTVTLTYGSSR------PSIEIYRPPAS 220
           S D +  K E  DL   +++ V   P     KP  T T    R      PS     P  S
Sbjct: 285 SSDGVSKKSEVKDLGPLEIHLVPYTPKFPTPKPRKTRTARLLRQKCVDTPSESTEEPGNS 344

Query: 221 RNADSGVHLNRLQFQQ----QQNSIHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPF 276
            ++ S +  N L+  +     QN +   +Q+D          +L     LN    + +  
Sbjct: 345 DSSSSCLTENSLKINKISVLHQNVLCKQEQVDKM--------KLGNKSELNMESNSDAQD 396

Query: 277 FRNNSEKMSMEDENFRKRKLPV-VSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVP 335
             N+ + M  E  +F K        S +       DG       D G  TG I  +VS+ 
Sbjct: 397 LVNSQKAMCNETTSFEKMAPSFDKDSNLSSDSTTVDGSSMSLAVDEG--TGFIRCTVSMS 454

Query: 336 AKPERRPSLPPSKQANKNLILKAISEAQESVTKTTNYSTV----PQKQTLPVAPRTRTSQ 391
              + + +     Q+ +NL + A    +ESV K  N   +    PQ+ +LP     + + 
Sbjct: 455 LPKQLKLTCNEHLQSGRNLGVSAPQMQKESVIKEENSLRIVPKKPQRHSLPATGVLKKAA 514

Query: 392 EELLAEVVQGQSRTPRISPPIKEEETKGDSVEKN 425
            E L E         + S P  EE++   S+E+N
Sbjct: 515 SEELLE---------KSSYPSSEEKSSEKSLERN 539


>gi|91982772 mucin 17 [Homo sapiens]
          Length = 4493

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 71/347 (20%), Positives = 123/347 (35%), Gaps = 35/347 (10%)

Query: 75   SVTTEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIPSARPEKRDSRVSTS 134
            + +TE SS  +++ +    + PS  S            ++P    P A PE   S +ST+
Sbjct: 1605 TASTEASSSTTAEGSSMTISTPSEGSPLL--------TSIPVSTTPVASPEA--STLSTT 1654

Query: 135  SQESKTTNVRQTYDDGAATRLMSTVKPL------REPAPSEDVIDIKPEPDDLIDEDLNF 188
              +S +  +  T    + T    T  P       R P  S   I ++  P  +    ++ 
Sbjct: 1655 PVDSNSPVITSTEVSSSPTPAEGTSMPTSTYTEGRTPLTS---ITVRTTP--VASSAIST 1709

Query: 189  VQENPLSQKKPTVTLTYGSSRPSI-EIYRPPASRNADSGVHLNRLQFQQQQNSIHAAKQL 247
            +   P+    P  T T   S P+  E    P S  ++    L  +        +     L
Sbjct: 1710 LSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSIP-------VSTTPVL 1762

Query: 248  DMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVSSVVKVKK 307
              ++S +  T       V  S E T SP     +E  S+      +   P+ S+ V    
Sbjct: 1763 SSEASTLSATPIDTSTPVTTSTEATSSP---TTAEGTSIPTSTLSEGMTPLTSTPVSHTL 1819

Query: 308  FNHDGEEEEEDDDYGSRTGSISSS-VSVPAKPERRPSLPPSKQANKNLILKAISEAQESV 366
              +            S +  ++S+ VS    P    S+  S  +  +  L +I  +  +V
Sbjct: 1820 VANSEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIATSTPSEGSTALTSIPVSTTTV 1879

Query: 367  --TKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTPRISPP 411
              ++T   ST P   + PV    + S     A+     + TPR   P
Sbjct: 1880 ASSETNTLSTTPAVTSTPVTTYAQVSSSPTTADGSSMPTSTPREGRP 1926



 Score = 33.9 bits (76), Expect = 0.56
 Identities = 69/341 (20%), Positives = 111/341 (32%), Gaps = 35/341 (10%)

Query: 78   TEPSSLKSSDTNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIPSARPEKRDSRVSTSSQE 137
            T  +   SS T   D  VP   S  S G       ++P    P A PE   S +ST+  +
Sbjct: 2488 TTSTEASSSPTTAEDIVVPI--STASEGSTLL--TSIPVSTTPVASPEA--STLSTTPVD 2541

Query: 138  SKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKP-EPDDLIDEDLNFVQENPLSQ 196
            S +  V  T    +AT    T  P    +     +   P     L   + + +   P+  
Sbjct: 2542 SNSPVVTSTEISSSATSAEGTSMPTSTYSEGSTPLRSMPVSTKPLASSEASTLSTTPVDT 2601

Query: 197  KKPTVTLTYGSSRP------SIEIYRPPASRNADSGVHLNRLQFQQQQNSIHAAKQLDMQ 250
              P  T T  SS P      S+ I  P     + + + ++ +     + S  +   +D +
Sbjct: 2602 SIPVTTSTETSSSPTTAKDTSMPISTPSEVSTSLTSILVSTMPVASSEASTLSTTPVDTR 2661

Query: 251  SSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSMEDENFRKRKLPVVSSVVKVKKFNH 310
            +     TG    P                 +E  SM      +R  P+ + +V      +
Sbjct: 2662 TLVTTSTGTSSSP---------------TTAEGSSMPTSTPGERSTPLTNILVSTTLLAN 2706

Query: 311  DGEEEEEDDDYGSRT-----GSISSSVSVPAKPERRPSLPPSKQANKNLILKAISEAQES 365
                        + T        SSS +       R S P         IL  +S    +
Sbjct: 2707 SEASTLSTTPVDTSTPVTTSAEASSSPTTAEGTSMRISTPSDGSTPLTSIL--VSTLPVA 2764

Query: 366  VTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQGQSRTP 406
             ++ +  ST     ++PV   T  S     AEV    + TP
Sbjct: 2765 SSEASTVSTTAVDTSIPVTTSTEASSSPTTAEVTSMPTSTP 2805



 Score = 32.3 bits (72), Expect = 1.6
 Identities = 72/375 (19%), Positives = 124/375 (33%), Gaps = 55/375 (14%)

Query: 73   LRSVTTEPSSLKSSD-----TNIFDSNVPSNKSNFSRGDERRHEAAVPPLAIPSARP--- 124
            LRS+      L SS+     T   D+++P   S  +       +    P++ PS      
Sbjct: 2576 LRSMPVSTKPLASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDTSMPISTPSEVSTSL 2635

Query: 125  -----------EKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAP-SEDVI 172
                           S +ST+  +++T     T    + T    +  P   P   S  + 
Sbjct: 2636 TSILVSTMPVASSEASTLSTTPVDTRTLVTTSTGTSSSPTTAEGSSMPTSTPGERSTPLT 2695

Query: 173  DIKPEPDDLIDEDLNFVQENPLSQKKPTVTLTYGSSRP------SIEIYRPPASRNADSG 226
            +I      L + + + +   P+    P  T    SS P      S+ I  P       + 
Sbjct: 2696 NILVSTTLLANSEASTLSTTPVDTSTPVTTSAEASSSPTTAEGTSMRISTPSDGSTPLTS 2755

Query: 227  VHLNRLQFQQQQNSIHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSEKMSM 286
            + ++ L     + S  +   +D                V  S E + SP     +E  SM
Sbjct: 2756 ILVSTLPVASSEASTVSTTAVDTSIP------------VTTSTEASSSP---TTAEVTSM 2800

Query: 287  EDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPS--- 343
                  +   P+ S  V     NH      E     +     S+ V+   K    P+   
Sbjct: 2801 PTSTPSETSTPLTSMPV-----NHTPVASSEAGTLSTTPVDTSTPVTTSTKASSSPTTAE 2855

Query: 344  ---LPPSKQANKNLILKAISEAQESV--TKTTNYSTVPQKQTLPVAPRTRTSQEELLAEV 398
               +P S  +  + +L +I  +   V  ++ +  ST P   ++PV   T  S     AE 
Sbjct: 2856 GIVVPISTASEGSTLLTSIPVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEG 2915

Query: 399  VQGQSRTP-RISPPI 412
                  TP  +S P+
Sbjct: 2916 TSMPISTPSEVSTPL 2930



 Score = 32.0 bits (71), Expect = 2.1
 Identities = 60/312 (19%), Positives = 107/312 (34%), Gaps = 25/312 (8%)

Query: 113  AVPPLAIPSARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVI 172
            +VP    P A  E   S +ST+  +S T     T    +      T  P   P+     +
Sbjct: 3226 SVPVSNTPVASSEA--SILSTTPVDSNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPL 3283

Query: 173  DIKPEPDDLI-DEDLNFVQENPLSQKKPTVTLTYGSSRPSI-EIYRPPASRNADSGVHLN 230
               P     +   + + +   P     P  T +  SS P I +    P S  ++    L 
Sbjct: 3284 TSMPVSTTTVASSETSTLSTTPADTSTPVTTYSQASSSPPIADGTSMPTSTYSEGSTPLT 3343

Query: 231  RLQFQQQQNSIHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPFFRNNSE--KMSMED 288
             + F            +  ++S +  T       V  S E + SP     +     S  +
Sbjct: 3344 NMSFS-------TTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSE 3396

Query: 289  ENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPS- 347
                   +PV ++ V   + N       + +   + +   SSS ++        SLP S 
Sbjct: 3397 GTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIA----EGTSLPTST 3452

Query: 348  -KQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAEVVQ------ 400
              + +  L +  +S    + ++ +  ST P   + PV   + T+     AEV        
Sbjct: 3453 TSEGSTPLSIMPLSTTPVASSEASTLSTTPVDTSTPVTTSSPTNSSPTTAEVTSMPTSTA 3512

Query: 401  GQSRTPRISPPI 412
            G+  TP  + P+
Sbjct: 3513 GEGSTPLTNMPV 3524



 Score = 30.0 bits (66), Expect = 8.0
 Identities = 59/336 (17%), Positives = 115/336 (34%), Gaps = 15/336 (4%)

Query: 69   VLDKLRSVTTEPSSLKSSDTNIFDSNV-PSNKSNFSRGDERRHEAAVPPLAIPSARPEKR 127
            V  +  +++T P    +  T   ++++ P+     S       E   P  ++P +     
Sbjct: 3353 VSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPVV 3412

Query: 128  DSRVSTSSQ---ESKTTNVRQTYDDGAATRLMSTVKPLREPAPSEDVIDIKP-EPDDLID 183
             S V+T S    +S T     T    + T    T  P    +     + I P     +  
Sbjct: 3413 SSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVAS 3472

Query: 184  EDLNFVQENPLSQKKPTVTLTYGSSRPSI-EIYRPPASRNADSGVHLNRLQFQQQQNSIH 242
             + + +   P+    P  T +  +S P+  E+   P S   +    L  +        + 
Sbjct: 3473 SEASTLSTTPVDTSTPVTTSSPTNSSPTTAEVTSMPTSTAGEGSTPLTNMP-------VS 3525

Query: 243  AAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPF-FRNNSEKMSMEDENFRKRKLPVVSS 301
                   ++S +  T       V +S + + SP   +  + +MS   E        ++SS
Sbjct: 3526 TTPVASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSS 3585

Query: 302  VVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPSLPPSKQANKNLILKAISE 361
                            D      T + S+S   P +    P   PS + +  L +  +S 
Sbjct: 3586 TYVTSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITLPMSTPS-EVSTPLTIMPVST 3644

Query: 362  AQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAE 397
               ++++    ST+P   + PV   T+ S   +  E
Sbjct: 3645 TSVTISEAGTASTLPVDTSTPVITSTQVSSSPVTPE 3680


>gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]
          Length = 4753

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 10/89 (11%)

Query: 288  DENFRKRKLPVVSSVVKVKKF----NHDGEEEEEDDDYGSRTGSISSSVSVPAKPERRPS 343
            +E   + ++P V S  ++ ++    N + E EEE++ YG +   +S+S      P   PS
Sbjct: 2697 EEEEEEERVPEVESEGELAQWEDFSNSNSETEEEEEPYGLQVARVSNS----RDPSLTPS 2752

Query: 344  LPPSKQANKNLILKAISEAQESVTKTTNY 372
            + P  +  K  I   I   QE  T+ +NY
Sbjct: 2753 IGPVSRGMKESISHKI--RQEKGTRASNY 2779


>gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]
          Length = 1962

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 61/266 (22%), Positives = 104/266 (39%), Gaps = 38/266 (14%)

Query: 278 RNNSEKMSMEDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSVPAK 337
           RN S  +  E+E   + K          KK   D +++E      ++  +    + VP  
Sbjct: 14  RNLSRDLVQEEEQLMEEK----------KKKKDDKKKKE-----AAQKKATEQKIKVPE- 57

Query: 338 PERRPSLPPSKQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQEELLAE 397
            + +PS+   + AN N      +    +  + T  +  PQ+Q     P+ +  Q++   +
Sbjct: 58  -QIKPSVSQPQPANSNNGTSTATSTNNNAKRATANNQQPQQQQQQQQPQQQQPQQQPQPQ 116

Query: 398 VVQGQ-SRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMSQDYYDM 456
             Q Q  + P+  P    E        + +  + +QLL R Q  PV+A  L  +    + 
Sbjct: 117 PQQQQPQQQPQALPRYPREVP-----PRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLNS 171

Query: 457 ESMVHADTRSFILKKPKLSEEVVVAPNQE------SGMKTADSLRVLSGHLMQTRDLVQP 510
           +S   A T     ++P+ + EV  + NQ       SG    +S R   G +  T D    
Sbjct: 172 QSESSALTN----QQPQNNGEVQNSKNQSDINHSTSGSHYENSQR---GPVSSTSDSSTN 224

Query: 511 DKPASPKFIVTLDGVPSPPGYMSDQE 536
            K A    +   +  PS PG  SD E
Sbjct: 225 CKNAVVSDLSEKEAWPSAPG--SDPE 248


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.129    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,295,510
Number of Sequences: 37866
Number of extensions: 1568997
Number of successful extensions: 6872
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 6634
Number of HSP's gapped (non-prelim): 316
length of query: 736
length of database: 18,247,518
effective HSP length: 110
effective length of query: 626
effective length of database: 14,082,258
effective search space: 8815493508
effective search space used: 8815493508
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.