FEN1 30668

Name: FEN1	Sequence: fasta or formatted (380aa)		NCBI GI: 4758356
Description: flap structure-specific endonuclease 1		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 31 3 C cysteine 1.6 6 1 D aspartate 4.2 16 2 E glutamate 10.0 38 3 F phenylalanine 3.7 14 2 G glycine 7.1 27 2 H histidine 2.1 8 1 I isoleucine 5.3 20 1 K lysine 10.0 38 3 L leucine 9.5 36 2 M methionine 2.6 10 2 N asparagine 2.1 8 1 P proline 4.5 17 2 Q glutamine 5.3 20 2 R arginine 5.8 22 2 S serine 7.1 27 2 T threonine 3.2 12 2 V valine 5.3 20 1 W tryptophan 0.5 2 1 Y tyrosine 2.1 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 flap structure-specific endonuclease 1 GEN1 0.107 Gen homolog 1, endonuclease GEN1 0.107 Gen homolog 1, endonuclease EXO1 0.106 exonuclease 1 isoform b EXO1 0.106 exonuclease 1 isoform a EXO1 0.106 exonuclease 1 isoform b ERCC5 0.067 XPG-complementing protein GTF2F1 0.010 general transcription factor IIF, polypeptide 1, 74... CCDC150 0.010 coiled-coil domain containing 150 LRRC45 0.010 leucine rich repeat containing 45 IQCD 0.010 IQ motif containing D SPAG5 0.008 sperm associated antigen 5 MFAP1 0.008 microfibrillar-associated protein 1 RBM16 0.008 RNA-binding motif protein 16 BTBD12 0.007 BTB (POZ) domain containing 12 ARP11 0.007 PREDICTED: actin-related Arp11 ARP11 0.007 PREDICTED: actin-related Arp11 TRDN 0.007 triadin MGC42105 0.007 serine/threonine-protein kinase NIM1 CCDC92 0.007 coiled-coil domain containing 92 PRKG2 0.006 protein kinase, cGMP-dependent, type II PLCB1 0.006 phosphoinositide-specific phospholipase C beta 1 iso... PLCB1 0.006 phosphoinositide-specific phospholipase C beta 1 iso... LOC390638 0.006 PREDICTED: similar to hCG32587 ARP11 0.006 PREDICTED: actin-related Arp11 LOC100131061 0.006 PREDICTED: similar to golgi autoantigen, golgin sub... LOC100131061 0.006 PREDICTED: similar to golgi autoantigen, golgin sub... C9orf144B 0.006 hypothetical protein LOC259308 KIAA1598 0.006 shootin1 isoform a KIAA1598 0.006 shootin1 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.