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Search of human proteins with 38524612
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38524612 tripartite motif-containing 74 [Homo sapiens]
(250 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38524612 tripartite motif-containing 74 [Homo sapiens] 523 e-149
gi|65285121 tripartite motif-containing 73 [Homo sapiens] 517 e-147
gi|30023818 tripartite motif protein 50A [Homo sapiens] 478 e-135
gi|56605981 tripartite motif-containing 72 [Homo sapiens] 108 4e-24
gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens] 104 6e-23
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 104 6e-23
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 104 6e-23
gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 104 6e-23
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 100 9e-22
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 100 9e-22
gi|117938316 tripartite motif-containing 22 [Homo sapiens] 100 1e-21
gi|5730009 ret finger protein [Homo sapiens] 100 1e-21
gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo s... 100 2e-21
gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens] 97 1e-20
gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens] 97 1e-20
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 97 1e-20
gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo s... 97 1e-20
gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa... 95 7e-20
gi|22749269 ring finger protein 129 [Homo sapiens] 93 2e-19
gi|60099474 tripartite motif-containing 61 [Homo sapiens] 89 3e-18
gi|27436877 tripartite motif-containing 59 [Homo sapiens] 89 3e-18
gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens] 89 3e-18
gi|198442878 tripartite motif-containing 17 isoform 3 [Homo sapi... 88 6e-18
gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens] 88 6e-18
gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens] 88 6e-18
gi|21630277 tripartite motif-containing 11 [Homo sapiens] 88 6e-18
gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens] 88 8e-18
gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens] 87 1e-17
gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens] 87 1e-17
gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens] 87 1e-17
>gi|38524612 tripartite motif-containing 74 [Homo sapiens]
Length = 250
Score = 523 bits (1346), Expect = e-149
Identities = 250/250 (100%), Positives = 250/250 (100%)
Query: 1 MAWQVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 60
MAWQVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV
Sbjct: 1 MAWQVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 60
Query: 61 DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 120
DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH
Sbjct: 61 DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 120
Query: 121 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 180
PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ
Sbjct: 121 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 180
Query: 181 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 240
ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF
Sbjct: 181 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 240
Query: 241 IWKFHSMASR 250
IWKFHSMASR
Sbjct: 241 IWKFHSMASR 250
>gi|65285121 tripartite motif-containing 73 [Homo sapiens]
Length = 250
Score = 517 bits (1332), Expect = e-147
Identities = 249/250 (99%), Positives = 249/250 (99%)
Query: 1 MAWQVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 60
MAWQVSLLELED LQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV
Sbjct: 1 MAWQVSLLELEDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 60
Query: 61 DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 120
DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH
Sbjct: 61 DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 120
Query: 121 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 180
PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ
Sbjct: 121 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 180
Query: 181 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 240
ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF
Sbjct: 181 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 240
Query: 241 IWKFHSMASR 250
IWKFHSMASR
Sbjct: 241 IWKFHSMASR 250
>gi|30023818 tripartite motif protein 50A [Homo sapiens]
Length = 487
Score = 478 bits (1229), Expect = e-135
Identities = 234/250 (93%), Positives = 238/250 (95%)
Query: 1 MAWQVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 60
MAWQVSLLELEDWLQCPICLEVFKE LMLQCGHSYCKGCLVSLS HLD ++RCP+C Q V
Sbjct: 1 MAWQVSLLELEDWLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV 60
Query: 61 DGSSSLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 120
DGSSSLPNVSLA VIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH
Sbjct: 61 DGSSSLPNVSLARVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 120
Query: 121 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 180
PVTPVSTV SRMKEELAAL SELKQEQKKVDELIAKLV NRTRIVNESDVFSWVIRREFQ
Sbjct: 121 PVTPVSTVYSRMKEELAALISELKQEQKKVDELIAKLVNNRTRIVNESDVFSWVIRREFQ 180
Query: 181 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 240
EL H VDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHH+F
Sbjct: 181 ELHHLVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHKF 240
Query: 241 IWKFHSMASR 250
I KFHSMASR
Sbjct: 241 IRKFHSMASR 250
>gi|56605981 tripartite motif-containing 72 [Homo sapiens]
Length = 477
Score = 108 bits (270), Expect = 4e-24
Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 19/250 (7%)
Query: 10 LEDWLQCPICLEVFKESLMLQCGHSYCKGCL--VSLSYHLDTKVRCPMCWQVVDGSSSLP 67
L L CP+CL++F + +CGHS+C+ CL V+ D V CP C +
Sbjct: 8 LHQELSCPLCLQLFDAPVTAECGHSFCRACLGRVAGEPAADGTVLCPCCQAPTRPQALST 67
Query: 68 NVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHHPVTPVST 127
N+ LA ++E L C H +PLS++CE+D+ L+CG+C LGSH+ H + P +
Sbjct: 68 NLQLARLVEGLAQVPQGH---CEEHLDPLSIYCEQDRALVCGVCASLGSHRGHRLLPAAE 124
Query: 128 VCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQELR---- 183
+R+K +L +L++ + ++ +A L + F + + ++R
Sbjct: 125 AHARLKTQLPQQKLQLQEACMRKEKSVAVLEHQLVEVEETVRQFRGAVGEQLGKMRVFLA 184
Query: 184 ---HPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEF 240
+D E R G R + SL+ LEQ L Q E VLE+ ++ EF
Sbjct: 185 ALEGSLDCEAERVRGEAGVALRRELGSLNSYLEQ-------LRQMEKVLEEVADKPQTEF 237
Query: 241 IWKFHSMASR 250
+ K+ + SR
Sbjct: 238 LMKYCLVTSR 247
>gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens]
Length = 270
Score = 104 bits (260), Expect = 6e-23
Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 7 LLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDT----KVRCPMCWQVVDG 62
LL +++ + CPICLE+ E L L CGHS C+ C+ + T K CP+C
Sbjct: 6 LLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65
Query: 63 SSSLPNVSLAWVIEALR---LPGDPEPK--VCVHHRNPLSLFCEKDQELICGLCGLLGSH 117
N LA ++E L+ L D K +C HH L LFC++D+++IC LC H
Sbjct: 66 EHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEH 125
Query: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRR 177
+ H V +E+L A+ LK+E+++ ++L A + + +T + I+
Sbjct: 126 RGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQT 185
Query: 178 EFQELRHPVDEEKARCLEGIGGHTRGLVASL----DMQLEQAQGTRERLAQAEC 227
EF +LR ++ E+ R L+ + + + D ++Q Q RE ++ EC
Sbjct: 186 EFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVEC 239
>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 104 bits (260), Expect = 6e-23
Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 7 LLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDT----KVRCPMCWQVVDG 62
LL +++ + CPICLE+ E L L CGHS C+ C+ + T K CP+C
Sbjct: 6 LLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65
Query: 63 SSSLPNVSLAWVIEALR---LPGDPEPK--VCVHHRNPLSLFCEKDQELICGLCGLLGSH 117
N LA ++E L+ L D K +C HH L LFC++D+++IC LC H
Sbjct: 66 EHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEH 125
Query: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRR 177
+ H V +E+L A+ LK+E+++ ++L A + + +T + I+
Sbjct: 126 RGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQT 185
Query: 178 EFQELRHPVDEEKARCLEGIGGHTRGLVASL----DMQLEQAQGTRERLAQAEC 227
EF +LR ++ E+ R L+ + + + D ++Q Q RE ++ EC
Sbjct: 186 EFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVEC 239
>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 104 bits (260), Expect = 6e-23
Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 7 LLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDT----KVRCPMCWQVVDG 62
LL +++ + CPICLE+ E L L CGHS C+ C+ + T K CP+C
Sbjct: 6 LLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65
Query: 63 SSSLPNVSLAWVIEALR---LPGDPEPK--VCVHHRNPLSLFCEKDQELICGLCGLLGSH 117
N LA ++E L+ L D K +C HH L LFC++D+++IC LC H
Sbjct: 66 EHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEH 125
Query: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRR 177
+ H V +E+L A+ LK+E+++ ++L A + + +T + I+
Sbjct: 126 RGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQT 185
Query: 178 EFQELRHPVDEEKARCLEGIGGHTRGLVASL----DMQLEQAQGTRERLAQAEC 227
EF +LR ++ E+ R L+ + + + D ++Q Q RE ++ EC
Sbjct: 186 EFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVEC 239
>gi|51477690 tripartite motif-containing 6 and tripartite
motif-containing 34 [Homo sapiens]
Length = 842
Score = 104 bits (260), Expect = 6e-23
Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 7 LLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDT----KVRCPMCWQVVDG 62
LL +++ + CPICLE+ E L L CGHS C+ C+ + T K CP+C
Sbjct: 360 LLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 419
Query: 63 SSSLPNVSLAWVIEALR---LPGDPEPK--VCVHHRNPLSLFCEKDQELICGLCGLLGSH 117
N LA ++E L+ L D K +C HH L LFC++D+++IC LC H
Sbjct: 420 EHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEH 479
Query: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRR 177
+ H V +E+L A+ LK+E+++ ++L A + + +T + I+
Sbjct: 480 RGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQT 539
Query: 178 EFQELRHPVDEEKARCLEGIGGHTRGLVASL----DMQLEQAQGTRERLAQAEC 227
EF +LR ++ E+ R L+ + + + D ++Q Q RE ++ EC
Sbjct: 540 EFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVEC 593
Score = 97.1 bits (240), Expect = 1e-20
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 9/198 (4%)
Query: 7 LLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHL----DTKVRCPMCWQVVDG 62
L+++ + + CPICLE+ E L + CGHS+C+ C+ + + CP+C
Sbjct: 34 LVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQP 93
Query: 63 SSSLPNVSLAWVIEALRL----PGDPEPKV-CVHHRNPLSLFCEKDQELICGLCGLLGSH 117
+ PN LA ++ LR PG V C H L LFC++D ++IC LC H
Sbjct: 94 GNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQEH 153
Query: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRR 177
+ H V V +E+ +LK E+++ ++L A + + +T N+ + I+
Sbjct: 154 RGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRIQT 213
Query: 178 EFQELRHPVDEEKARCLE 195
EF +LR+ +D + R L+
Sbjct: 214 EFNQLRNILDRVEQRELK 231
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 100 bits (250), Expect = 9e-22
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 5/230 (2%)
Query: 6 SLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSS 65
+L L+ C +CLE KE ++++CGH++CK C+ L+ CP+C + S
Sbjct: 19 ALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSL 78
Query: 66 LPNVSLAWVIEALRLPGDPEPKV-----CVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 120
PN L ++E + + K+ C H LSLFC +DQE +C +C + +H+ H
Sbjct: 79 RPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAH 138
Query: 121 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 180
V P+ KE+L L+Q+ +++ + K + + I REF+
Sbjct: 139 TVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFE 198
Query: 181 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLE 230
EL +DEE+ L + + ++ L R LA +E
Sbjct: 199 ELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVE 248
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 100 bits (250), Expect = 9e-22
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 5/230 (2%)
Query: 6 SLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSS 65
+L L+ C +CLE KE ++++CGH++CK C+ L+ CP+C + S
Sbjct: 19 ALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSL 78
Query: 66 LPNVSLAWVIEALRLPGDPEPKV-----CVHHRNPLSLFCEKDQELICGLCGLLGSHQHH 120
PN L ++E + + K+ C H LSLFC +DQE +C +C + +H+ H
Sbjct: 79 RPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAH 138
Query: 121 PVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQ 180
V P+ KE+L L+Q+ +++ + K + + I REF+
Sbjct: 139 TVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFE 198
Query: 181 ELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLE 230
EL +DEE+ L + + ++ L R LA +E
Sbjct: 199 ELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVE 248
>gi|117938316 tripartite motif-containing 22 [Homo sapiens]
Length = 498
Score = 100 bits (249), Expect = 1e-21
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 13/222 (5%)
Query: 8 LELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVR----CPMCWQVVDGS 63
+++E + CPICLE+ E L L CGHS+C+ C+ + R CP+C
Sbjct: 7 VDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPG 66
Query: 64 SSLPNVSLAWVIEALR----LPGDPEPK-VCVHHRNPLSLFCEKDQELICGLCGLLGSHQ 118
+ PN LA ++E ++ P + + + VC HH L +FC++D ++IC +C L HQ
Sbjct: 67 NLRPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWVCELSQEHQ 126
Query: 119 HHPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRRE 178
H ++ V +E+L L +E ++ ++L + + RT N + I +
Sbjct: 127 GHQTFRINEVVKECQEKLQVALQRLIKEDQEAEKLEDDIRQERTAWKNYIQIERQKILKG 186
Query: 179 FQELRHPVDEEKARCL----EGIGGHTRGLVASLDMQLEQAQ 216
F E+R +D E+ R L EG L A+ D ++Q Q
Sbjct: 187 FNEMRVILDNEEQRELQKLEEGEVNVLDNLAAATDQLVQQRQ 228
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 100 bits (249), Expect = 1e-21
Identities = 68/248 (27%), Positives = 107/248 (43%), Gaps = 7/248 (2%)
Query: 10 LEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSSLPNV 69
L+ CP+CL+ F E +ML CGH+ C CL +T V CP C + PN
Sbjct: 10 LQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRHMRPNR 69
Query: 70 SLAWVIEALR-----LPGDP--EPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHHPV 122
LA V + ++ P P E VC HR PL L+CE+DQ IC +C H+ H V
Sbjct: 70 HLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDRSREHRGHSV 129
Query: 123 TPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQEL 182
P+ KE++ LK+ + A+ + R +++ + + I EF++L
Sbjct: 130 LPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMEREKIVWEFEQL 189
Query: 183 RHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEFIW 242
H + E + R L + + S++ + Q L+ LE+ + E +
Sbjct: 190 YHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQLEEKQQQPTRELLQ 249
Query: 243 KFHSMASR 250
SR
Sbjct: 250 DIGDTLSR 257
>gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo
sapiens]
Length = 493
Score = 100 bits (248), Expect = 2e-21
Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 11/231 (4%)
Query: 7 LLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVS--LSYHLDT-KVRCPMCWQVVDGS 63
L+ +++ + CPICLE+ + L L CGHS+C+ CL + LD + CP+C
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 64 SSLPNVSLAWVIEALR----LPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQH 119
+ PN +A ++E LR P + C H L LFC++D ++IC LC H+
Sbjct: 66 NIRPNRHVANLVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRG 125
Query: 120 HPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREF 179
H P V + +L A L+Q+Q++ +EL A + + + + + +F
Sbjct: 126 HHTFPTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNVLADF 185
Query: 180 QELRHPVDEEKARCLEGIGGHTRGLVASL----DMQLEQAQGTRERLAQAE 226
++LR +D E++ L+ + ++ SL ++Q Q RE ++ E
Sbjct: 186 EQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLE 236
>gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]
Length = 488
Score = 97.1 bits (240), Expect = 1e-20
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 9/198 (4%)
Query: 7 LLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHL----DTKVRCPMCWQVVDG 62
L+++ + + CPICLE+ E L + CGHS+C+ C+ + + CP+C
Sbjct: 6 LVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQP 65
Query: 63 SSSLPNVSLAWVIEALRL----PGDPEPKV-CVHHRNPLSLFCEKDQELICGLCGLLGSH 117
+ PN LA ++ LR PG V C H L LFC++D ++IC LC H
Sbjct: 66 GNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQEH 125
Query: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRR 177
+ H V V +E+ +LK E+++ ++L A + + +T N+ + I+
Sbjct: 126 RGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRIQT 185
Query: 178 EFQELRHPVDEEKARCLE 195
EF +LR+ +D + R L+
Sbjct: 186 EFNQLRNILDRVEQRELK 203
>gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]
Length = 516
Score = 97.1 bits (240), Expect = 1e-20
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 9/198 (4%)
Query: 7 LLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHL----DTKVRCPMCWQVVDG 62
L+++ + + CPICLE+ E L + CGHS+C+ C+ + + CP+C
Sbjct: 34 LVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQP 93
Query: 63 SSSLPNVSLAWVIEALRL----PGDPEPKV-CVHHRNPLSLFCEKDQELICGLCGLLGSH 117
+ PN LA ++ LR PG V C H L LFC++D ++IC LC H
Sbjct: 94 GNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQEH 153
Query: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRR 177
+ H V V +E+ +LK E+++ ++L A + + +T N+ + I+
Sbjct: 154 RGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRIQT 213
Query: 178 EFQELRHPVDEEKARCLE 195
EF +LR+ +D + R L+
Sbjct: 214 EFNQLRNILDRVEQRELK 231
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 97.1 bits (240), Expect = 1e-20
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 11/231 (4%)
Query: 7 LLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVS--LSYHLDT-KVRCPMCWQVVDGS 63
L+ +++ + CPICLE+ + L L CGHS+C+ CL + LD + CP+C
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 64 SSLPNVSLAWVIEALR----LPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQH 119
+ PN +A ++E LR P + C H L LFC++D ++IC LC H+
Sbjct: 66 NIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRG 125
Query: 120 HPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREF 179
H V + +L A L+Q+Q++ +EL A + + + + + +F
Sbjct: 126 HHTFLTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNVLADF 185
Query: 180 QELRHPVDEEKARCLEGIGGHTRGLVASL----DMQLEQAQGTRERLAQAE 226
++LR +D E++ L+ + ++ SL ++Q Q RE ++ E
Sbjct: 186 EQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLE 236
>gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo
sapiens]
Length = 347
Score = 97.1 bits (240), Expect = 1e-20
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 11/231 (4%)
Query: 7 LLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVS--LSYHLDT-KVRCPMCWQVVDGS 63
L+ +++ + CPICLE+ + L L CGHS+C+ CL + LD + CP+C
Sbjct: 6 LVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 65
Query: 64 SSLPNVSLAWVIEALR----LPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQH 119
+ PN +A ++E LR P + C H L LFC++D ++IC LC H+
Sbjct: 66 NIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQEHRG 125
Query: 120 HPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREF 179
H V + +L A L+Q+Q++ +EL A + + + + + +F
Sbjct: 126 HHTFLTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNVLADF 185
Query: 180 QELRHPVDEEKARCLEGIGGHTRGLVASL----DMQLEQAQGTRERLAQAE 226
++LR +D E++ L+ + ++ SL ++Q Q RE ++ E
Sbjct: 186 EQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLE 236
>gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo
sapiens]
Length = 474
Score = 94.7 bits (234), Expect = 7e-20
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 9 ELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSSLPN 68
++++ L CPICL+ F++ + ++CGH++C+GCL CP C ++ PN
Sbjct: 5 DIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAALRPN 64
Query: 69 VSLAWVIEAL--RLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHHPVTPVS 126
+LA + E R G P +C H PL LFCE DQ +C +C HQ H + P+
Sbjct: 65 WALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTHAMAPID 124
Query: 127 TVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFSWVIRREFQELRHPV 186
+E+L L + KKV L VKN T+ ++ I EF +L + +
Sbjct: 125 EAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMRISTEFSKLHNFL 184
Query: 187 DEEK 190
EE+
Sbjct: 185 VEEE 188
>gi|22749269 ring finger protein 129 [Homo sapiens]
Length = 471
Score = 93.2 bits (230), Expect = 2e-19
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 8/220 (3%)
Query: 1 MAWQVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 60
M + +L+ L++ CPICLE K+ + + CGH++C+ CL LD CP+C
Sbjct: 1 MEFVTALVNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVCRFCF 60
Query: 61 DGSS--------SLPNVSLAWVIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCG 112
S +L ++ I + E +C H L+LFC KD E++C C
Sbjct: 61 PYKSFRRNPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKHNQFLTLFCVKDLEILCTQCS 120
Query: 113 LLGSHQHHPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDVFS 172
HQ H + P+ S +E L L+ ++V+++I + + +
Sbjct: 121 FSTKHQKHYICPIKKAASYHREILEGSLEPLRNNIERVEKVIILQGSKSVELKKKVEYKR 180
Query: 173 WVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQL 212
I EF+++R + E+ L I ++A L+ L
Sbjct: 181 EEINSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNENL 220
>gi|60099474 tripartite motif-containing 61 [Homo sapiens]
Length = 209
Score = 89.4 bits (220), Expect = 3e-18
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 1 MAWQVSLLELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVV 60
M + +L +L CPICL+ K+ + + CGH++C C++ L CP C
Sbjct: 1 MEFVTALADLRAEASCPICLDYLKDPVTISCGHNFCLSCIIMSWKDLHDSFPCPFCHFCC 60
Query: 61 DGSSSLPNVSLAWVIE--------ALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCG 112
+ N L + E + + E VC H L+ FC+KD EL+C C
Sbjct: 61 PERKFISNPQLGSLTEIAKQLQIRSKKRKRQEEKHVCKKHNQVLTFFCQKDLELLCPRCS 120
Query: 113 LLGSHQHHPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTR 163
L HQHH V P+ S +++L E K+ ELI K++ +TR
Sbjct: 121 LSTDHQHHCVWPIKKAASYHRKKL----EEYNAPWKERVELIEKVITMQTR 167
>gi|27436877 tripartite motif-containing 59 [Homo sapiens]
Length = 403
Score = 89.4 bits (220), Expect = 3e-18
Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 16/249 (6%)
Query: 11 EDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYH---------LDTKVRCPMCWQVVD 61
E+ L CPIC +F++ +L C H++C+ CL ++ L ++CP C + +
Sbjct: 5 EEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITE 64
Query: 62 ----GSSSLP-NVSLAWVIEALRLPGDPEPKVCV-HHRNPLSLFCEKDQELICGLCGLLG 115
G SLP N +L +IE + P+ C H+R PL+++C D++L+CG C +G
Sbjct: 65 IAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHCLTIG 124
Query: 116 SHQHHPVTPVSTVCSRMKEELAALFSELKQEQ-KKVDELIAKLVKNRTRIVNESDVFSWV 174
H HP+ + + + K+ L +L + LI KL + ++
Sbjct: 125 QHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKEQKSHSEKMIQGDKEA 184
Query: 175 IRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGN 234
+ + F+EL ++++K L + + Q+E+ + RE+ + +
Sbjct: 185 VLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIREQQLELMALTISLQE 244
Query: 235 EDHHEFIWK 243
E +F+ K
Sbjct: 245 ESPLKFLEK 253
>gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens]
Length = 493
Score = 89.4 bits (220), Expect = 3e-18
Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 17/249 (6%)
Query: 14 LQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSSLPNVSLAW 73
L C +C + F++++ L+CGH++C+GC VS + + CP+C + N +L
Sbjct: 19 LLCAVCYDPFRDAVTLRCGHNFCRGC-VSRCWEVQVSPTCPVCKDRASPADLRTNHTLNN 77
Query: 74 VIEAL--------RLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQHHPVTPV 125
++E L R +VC HR LSLFC +D+EL+C C HQ H V PV
Sbjct: 78 LVEKLLREEAEGARWTSYRFSRVCRLHRGQLSLFCLEDKELLCCSCQADPRHQGHRVQPV 137
Query: 126 STVCSRMKEELAALFSELKQEQKKVDELIAKLVKNRTRIVNESDV-FSWV---IRREFQE 181
+ + + L+++ K + ++ I + V +W+ IR+EF +
Sbjct: 138 KDTAHDFRAKCRNMEHALREKAK----AFWAMRRSYEAIAKHNQVEAAWLEGRIRQEFDK 193
Query: 182 LRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQFGNEDHHEFI 241
LR + E+ L+ + TR D +++Q E LA L+ ED F+
Sbjct: 194 LREFLRVEEQAILDAMAEETRQKQLLADEKMKQLTEETEVLAHEIERLQMEMKEDDVSFL 253
Query: 242 WKFHSMASR 250
K S R
Sbjct: 254 MKHKSRKRR 262
>gi|198442878 tripartite motif-containing 17 isoform 3 [Homo
sapiens]
Length = 343
Score = 88.2 bits (217), Expect = 6e-18
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 9 ELEDWLQCPICLEVFKESLMLQCGHSYCKGCL-VSLSYHLDTKVR--------CPMCWQV 59
+L++ C ICL+ F + +M CGH++C+ C+ +S K R CP C ++
Sbjct: 9 KLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREM 68
Query: 60 VDGSSSLPNVSLAWVIE-ALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQ 118
+ LPN L V E A + PG + +C H PL LFC+KDQ IC +C H+
Sbjct: 69 SPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESREHR 128
Query: 119 HHPVTPVSTVCS----RMKEELAALFSEL-------KQEQKKVDELIAKLVKNRTRIVNE 167
H V P +++E++ L ++ +E++ + E K+ + R RIV E
Sbjct: 129 LHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLE 188
Query: 168 SDVFSWVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQ 211
+ + + E Q L ++ E+ E R VA LD Q
Sbjct: 189 FEKMNLYLVEEEQRLLQALETEE----EETASRLRESVACLDRQ 228
>gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 88.2 bits (217), Expect = 6e-18
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 9 ELEDWLQCPICLEVFKESLMLQCGHSYCKGCL-VSLSYHLDTKVR--------CPMCWQV 59
+L++ C ICL+ F + +M CGH++C+ C+ +S K R CP C ++
Sbjct: 9 KLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREM 68
Query: 60 VDGSSSLPNVSLAWVIE-ALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQ 118
+ LPN L V E A + PG + +C H PL LFC+KDQ IC +C H+
Sbjct: 69 SPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESREHR 128
Query: 119 HHPVTPVSTVCS----RMKEELAALFSEL-------KQEQKKVDELIAKLVKNRTRIVNE 167
H V P +++E++ L ++ +E++ + E K+ + R RIV E
Sbjct: 129 LHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLE 188
Query: 168 SDVFSWVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQ 211
+ + + E Q L ++ E+ E R VA LD Q
Sbjct: 189 FEKMNLYLVEEEQRLLQALETEE----EETASRLRESVACLDRQ 228
>gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 88.2 bits (217), Expect = 6e-18
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 9 ELEDWLQCPICLEVFKESLMLQCGHSYCKGCL-VSLSYHLDTKVR--------CPMCWQV 59
+L++ C ICL+ F + +M CGH++C+ C+ +S K R CP C ++
Sbjct: 9 KLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREM 68
Query: 60 VDGSSSLPNVSLAWVIE-ALRLPGDPEPKVCVHHRNPLSLFCEKDQELICGLCGLLGSHQ 118
+ LPN L V E A + PG + +C H PL LFC+KDQ IC +C H+
Sbjct: 69 SPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESREHR 128
Query: 119 HHPVTPVSTVCS----RMKEELAALFSEL-------KQEQKKVDELIAKLVKNRTRIVNE 167
H V P +++E++ L ++ +E++ + E K+ + R RIV E
Sbjct: 129 LHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLE 188
Query: 168 SDVFSWVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQ 211
+ + + E Q L ++ E+ E R VA LD Q
Sbjct: 189 FEKMNLYLVEEEQRLLQALETEE----EETASRLRESVACLDRQ 228
>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
Length = 468
Score = 88.2 bits (217), Expect = 6e-18
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 10 LEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSSLPNV 69
L++ C ICL+ F + +M CGH++C+ C+ + CP C ++ + PN
Sbjct: 10 LQEEATCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSPQRNLRPNR 69
Query: 70 SLAWVIEALRL--PGDPEPK-VCVHHRNPLSLFCEKDQELICGLCGLLGSHQHHPVTPVS 126
LA + E R P P P+ VC HR PL+ FC + L+C C G H H V P+
Sbjct: 70 PLAKMAEMARRLHPPSPVPQGVCPAHREPLAAFCGDELRLLCAACERSGEHWAHRVRPLQ 129
Query: 127 TVCSRMKEELAALFSELKQE-------QKKVDE---LIAKLVKN-RTRIVNESDVFSWVI 175
+K +L L+++ Q + DE L K+V++ R ++ E + ++
Sbjct: 130 DAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCVLWQKMVESQRQNVLGEFERLRRLL 189
Query: 176 RREFQELRHPVDEEKARCL 194
E Q+L ++EE+ L
Sbjct: 190 AEEEQQLLQRLEEEELEVL 208
>gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]
Length = 511
Score = 87.8 bits (216), Expect = 8e-18
Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 28/270 (10%)
Query: 9 ELEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSL-------SYHLDTK-----VRCPMC 56
EL+ C ICLE+F+E + ++CGHS+C+ C+ S T+ + CP C
Sbjct: 22 ELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLPCPQC 81
Query: 57 WQVVDGSSSLPNVSLAWVIEALR-------LPGDPEPKV---------CVHHRNPLSLFC 100
+ S PN LA V LR PG+ + C H P L+C
Sbjct: 82 REPARPSQLRPNRQLAAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKLYC 141
Query: 101 EKDQELICGLCGLLGSHQHHPVTPVSTVCSRMKEELAALFSELKQEQKKVDELIAKLVKN 160
+ D IC +C H+ H V P+ KE L + LK+E + + + K
Sbjct: 142 QDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFRSTEKKE 201
Query: 161 RTRIVNESDVFSWVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRE 220
++ + + EFQ LR + E++ R L + +R + + L Q
Sbjct: 202 SKELLKQMAAEQEKVGAEFQALRAFLVEQEGRLLGRLEELSREVAQKQNENLAQLGVEIT 261
Query: 221 RLAQAECVLEQFGNEDHHEFIWKFHSMASR 250
+L++ +++ + +F+ +F S SR
Sbjct: 262 QLSKLSSQIQETAQKPDLDFLQEFKSTLSR 291
>gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]
Length = 410
Score = 87.0 bits (214), Expect = 1e-17
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 10 LEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSL-------SYHLDTKVRCPMCWQVVD- 61
LE+ L CPIC +F + +L C H++CK CL + S +CP C +
Sbjct: 7 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 66
Query: 62 -GSSSLP-NVSLAWVIEAL-RLPGDPEPKVCVHHRN-PLSLFCEKDQELICGLCGLLGSH 117
G +SL N SL ++E ++ P+ VC H PL++FC D +LICG+C G H
Sbjct: 67 TGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGEH 126
Query: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQK-----KVDELIAKLVKNRTRIVNESDVFS 172
H + ++ ++ +LF + ++ ++D L K+ + +SD
Sbjct: 127 TKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD--- 183
Query: 173 WVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQF 232
++ F++L+H +D++K L ++ + D ++ + + A + E F
Sbjct: 184 -KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF 242
>gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 87.0 bits (214), Expect = 1e-17
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 10 LEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSL-------SYHLDTKVRCPMCWQVVD- 61
LE+ L CPIC +F + +L C H++CK CL + S +CP C +
Sbjct: 4 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
Query: 62 -GSSSLP-NVSLAWVIEAL-RLPGDPEPKVCVHHRN-PLSLFCEKDQELICGLCGLLGSH 117
G +SL N SL ++E ++ P+ VC H PL++FC D +LICG+C G H
Sbjct: 64 TGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGEH 123
Query: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQK-----KVDELIAKLVKNRTRIVNESDVFS 172
H + ++ ++ +LF + ++ ++D L K+ + +SD
Sbjct: 124 TKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD--- 180
Query: 173 WVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQF 232
++ F++L+H +D++K L ++ + D ++ + + A + E F
Sbjct: 181 -KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF 239
>gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 87.0 bits (214), Expect = 1e-17
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 10 LEDWLQCPICLEVFKESLMLQCGHSYCKGCLVSL-------SYHLDTKVRCPMCWQVVD- 61
LE+ L CPIC +F + +L C H++CK CL + S +CP C +
Sbjct: 4 LEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSA 63
Query: 62 -GSSSLP-NVSLAWVIEAL-RLPGDPEPKVCVHHRN-PLSLFCEKDQELICGLCGLLGSH 117
G +SL N SL ++E ++ P+ VC H PL++FC D +LICG+C G H
Sbjct: 64 TGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGEH 123
Query: 118 QHHPVTPVSTVCSRMKEELAALFSELKQEQK-----KVDELIAKLVKNRTRIVNESDVFS 172
H + ++ ++ +LF + ++ ++D L K+ + +SD
Sbjct: 124 TKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD--- 180
Query: 173 WVIRREFQELRHPVDEEKARCLEGIGGHTRGLVASLDMQLEQAQGTRERLAQAECVLEQF 232
++ F++L+H +D++K L ++ + D ++ + + A + E F
Sbjct: 181 -KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAF 239
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,579,194
Number of Sequences: 37866
Number of extensions: 483076
Number of successful extensions: 2389
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 1909
Number of HSP's gapped (non-prelim): 457
length of query: 250
length of database: 18,247,518
effective HSP length: 100
effective length of query: 150
effective length of database: 14,460,918
effective search space: 2169137700
effective search space used: 2169137700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.