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Search of human proteins with 38372935
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38372935 brevican isoform 1 [Homo sapiens]
(911 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38372935 brevican isoform 1 [Homo sapiens] 1887 0.0
gi|38372931 brevican isoform 2 [Homo sapiens] 1306 0.0
gi|126090892 aggrecan isoform 2 precursor [Homo sapiens] 369 e-102
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens] 369 e-102
gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens] 332 1e-90
gi|21361116 versican isoform 1 [Homo sapiens] 324 3e-88
gi|187607300 versican isoform 2 [Homo sapiens] 322 8e-88
gi|30102948 hyaluronan and proteoglycan link protein 3 [Homo sap... 233 8e-61
gi|4503053 hyaluronan and proteoglycan link protein 1 [Homo sapi... 224 2e-58
gi|30794472 hyaluronan and proteoglycan link protein 4 [Homo sap... 209 9e-54
gi|11141887 brain link protein-1 [Homo sapiens] 204 4e-52
gi|110624774 mannose receptor, C type 2 [Homo sapiens] 107 5e-23
gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens] 95 3e-19
gi|31542313 C-type lectin domain family 4, member D [Homo sapiens] 94 8e-19
gi|4505245 mannose receptor C type 1 precursor [Homo sapiens] 94 8e-19
gi|18641360 collectin sub-family member 12 [Homo sapiens] 90 8e-18
gi|20149533 Fc fragment of IgE, low affinity II, receptor for (C... 89 1e-17
gi|223029517 CD209 molecule isoform 8 [Homo sapiens] 88 4e-17
gi|223029386 CD209 molecule isoform 3 [Homo sapiens] 88 4e-17
gi|223029384 CD209 molecule isoform 7 [Homo sapiens] 88 4e-17
gi|223029382 CD209 molecule isoform 6 [Homo sapiens] 88 4e-17
gi|223029380 CD209 molecule isoform 5 [Homo sapiens] 88 4e-17
gi|10863957 CD209 molecule isoform 1 [Homo sapiens] 88 4e-17
gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo... 86 2e-16
gi|53832016 C-type lectin, superfamily member 14 isoform 2 [Homo... 86 2e-16
gi|223029388 CD209 molecule isoform 4 [Homo sapiens] 85 3e-16
gi|223278347 C-type lectin domain family 4, member M isoform 9 [... 79 3e-14
gi|223278339 C-type lectin domain family 4, member M isoform 7 [... 79 3e-14
gi|223278337 C-type lectin domain family 4, member M isoform 12 ... 79 3e-14
gi|223278335 C-type lectin domain family 4, member M isoform 2 [... 79 3e-14
>gi|38372935 brevican isoform 1 [Homo sapiens]
Length = 911
Score = 1887 bits (4887), Expect = 0.0
Identities = 911/911 (100%), Positives = 911/911 (100%)
Query: 1 MAQLFLPLLAALVLAQAPAALADVLEGDSSEDRAFRVRIAGDAPLQGVLGGALTIPCHVH 60
MAQLFLPLLAALVLAQAPAALADVLEGDSSEDRAFRVRIAGDAPLQGVLGGALTIPCHVH
Sbjct: 1 MAQLFLPLLAALVLAQAPAALADVLEGDSSEDRAFRVRIAGDAPLQGVLGGALTIPCHVH 60
Query: 61 YLRPPPSRRAVLGSPRVKWTFLSRGREAEVLVARGVRVKVNEAYRFRVALPAYPASLTDV 120
YLRPPPSRRAVLGSPRVKWTFLSRGREAEVLVARGVRVKVNEAYRFRVALPAYPASLTDV
Sbjct: 61 YLRPPPSRRAVLGSPRVKWTFLSRGREAEVLVARGVRVKVNEAYRFRVALPAYPASLTDV 120
Query: 121 SLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFSGAQEACA 180
SLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFSGAQEACA
Sbjct: 121 SLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFSGAQEACA 180
Query: 181 RIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVV 240
RIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVV
Sbjct: 181 RIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVV 240
Query: 241 DPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIATTGQLYAAWDGGLDH 300
DPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIATTGQLYAAWDGGLDH
Sbjct: 241 DPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIATTGQLYAAWDGGLDH 300
Query: 301 CSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSAQPS 360
CSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSAQPS
Sbjct: 301 CSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSAQPS 360
Query: 361 AIPEASNPASNPASDGLEAIVTVTETLEELQLPQEATESESRGAIYSIPIMEDGGGGSST 420
AIPEASNPASNPASDGLEAIVTVTETLEELQLPQEATESESRGAIYSIPIMEDGGGGSST
Sbjct: 361 AIPEASNPASNPASDGLEAIVTVTETLEELQLPQEATESESRGAIYSIPIMEDGGGGSST 420
Query: 421 PEDPAEAPRTLLEFETQSMVPPTGFSEEEGKALEEEEKYEDEEEKEEEEEEEEVEDEALW 480
PEDPAEAPRTLLEFETQSMVPPTGFSEEEGKALEEEEKYEDEEEKEEEEEEEEVEDEALW
Sbjct: 421 PEDPAEAPRTLLEFETQSMVPPTGFSEEEGKALEEEEKYEDEEEKEEEEEEEEVEDEALW 480
Query: 481 AWPSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPT 540
AWPSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPT
Sbjct: 481 AWPSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPT 540
Query: 541 ETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGESEETGSSEGAPSLLPATRA 600
ETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGESEETGSSEGAPSLLPATRA
Sbjct: 541 ETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGESEETGSSEGAPSLLPATRA 600
Query: 601 PEGTRELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAVVPASGDCVPSPCHNGGT 660
PEGTRELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAVVPASGDCVPSPCHNGGT
Sbjct: 601 PEGTRELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAVVPASGDCVPSPCHNGGT 660
Query: 661 CLEEEEGVRCLCLPGYGGDLCDVGLRFCNPGWDAFQGACYKHFSTRRSWEEAETQCRMYG 720
CLEEEEGVRCLCLPGYGGDLCDVGLRFCNPGWDAFQGACYKHFSTRRSWEEAETQCRMYG
Sbjct: 661 CLEEEEGVRCLCLPGYGGDLCDVGLRFCNPGWDAFQGACYKHFSTRRSWEEAETQCRMYG 720
Query: 721 AHLASISTPEEQDFINNRYREYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLS 780
AHLASISTPEEQDFINNRYREYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLS
Sbjct: 721 AHLASISTPEEQDFINNRYREYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLS 780
Query: 781 GENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPELPLAQVFGRPRLRYEVDTVL 840
GENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPELPLAQVFGRPRLRYEVDTVL
Sbjct: 781 GENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPELPLAQVFGRPRLRYEVDTVL 840
Query: 841 RYRCREGLAQRNLPLIRCQENGRWEAPQISCVPRRPARALHPEEDPEGRQGRLLGRWKAL 900
RYRCREGLAQRNLPLIRCQENGRWEAPQISCVPRRPARALHPEEDPEGRQGRLLGRWKAL
Sbjct: 841 RYRCREGLAQRNLPLIRCQENGRWEAPQISCVPRRPARALHPEEDPEGRQGRLLGRWKAL 900
Query: 901 LIPPSSPMPGP 911
LIPPSSPMPGP
Sbjct: 901 LIPPSSPMPGP 911
>gi|38372931 brevican isoform 2 [Homo sapiens]
Length = 671
Score = 1306 bits (3379), Expect = 0.0
Identities = 648/649 (99%), Positives = 649/649 (100%)
Query: 1 MAQLFLPLLAALVLAQAPAALADVLEGDSSEDRAFRVRIAGDAPLQGVLGGALTIPCHVH 60
MAQLFLPLLAALVLAQAPAALADVLEGDSSEDRAFRVRIAGDAPLQGVLGGALTIPCHVH
Sbjct: 1 MAQLFLPLLAALVLAQAPAALADVLEGDSSEDRAFRVRIAGDAPLQGVLGGALTIPCHVH 60
Query: 61 YLRPPPSRRAVLGSPRVKWTFLSRGREAEVLVARGVRVKVNEAYRFRVALPAYPASLTDV 120
YLRPPPSRRAVLGSPRVKWTFLSRGREAEVLVARGVRVKVNEAYRFRVALPAYPASLTDV
Sbjct: 61 YLRPPPSRRAVLGSPRVKWTFLSRGREAEVLVARGVRVKVNEAYRFRVALPAYPASLTDV 120
Query: 121 SLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFSGAQEACA 180
SLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFSGAQEACA
Sbjct: 121 SLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFSGAQEACA 180
Query: 181 RIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVV 240
RIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVV
Sbjct: 181 RIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVV 240
Query: 241 DPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIATTGQLYAAWDGGLDH 300
DPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIATTGQLYAAWDGGLDH
Sbjct: 241 DPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIATTGQLYAAWDGGLDH 300
Query: 301 CSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSAQPS 360
CSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSAQPS
Sbjct: 301 CSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSAQPS 360
Query: 361 AIPEASNPASNPASDGLEAIVTVTETLEELQLPQEATESESRGAIYSIPIMEDGGGGSST 420
AIPEASNPASNPASDGLEAIVTVTETLEELQLPQEATESESRGAIYSIPIMEDGGGGSST
Sbjct: 361 AIPEASNPASNPASDGLEAIVTVTETLEELQLPQEATESESRGAIYSIPIMEDGGGGSST 420
Query: 421 PEDPAEAPRTLLEFETQSMVPPTGFSEEEGKALEEEEKYEDEEEKEEEEEEEEVEDEALW 480
PEDPAEAPRTLLEFETQSMVPPTGFSEEEGKALEEEEKYEDEEEKEEEEEEEEVEDEALW
Sbjct: 421 PEDPAEAPRTLLEFETQSMVPPTGFSEEEGKALEEEEKYEDEEEKEEEEEEEEVEDEALW 480
Query: 481 AWPSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPT 540
AWPSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPT
Sbjct: 481 AWPSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPT 540
Query: 541 ETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGESEETGSSEGAPSLLPATRA 600
ETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGESEETGSSEGAPSLLPATRA
Sbjct: 541 ETLPTPRERNLASPSPSTLVEAREVGEATGGPELSGVPRGESEETGSSEGAPSLLPATRA 600
Query: 601 PEGTRELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAVVPASGD 649
PEGTRELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAVVPASG+
Sbjct: 601 PEGTRELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAVVPASGN 649
>gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]
Length = 2416
Score = 369 bits (946), Expect = e-102
Identities = 203/432 (46%), Positives = 265/432 (61%), Gaps = 22/432 (5%)
Query: 29 SSEDRAFRVRIAGDAPLQGVLGGALTIPCH----VHYLRPPPSRRAVLGSPRVKWTFLSR 84
S D + V I +PL+ +LG +LTIPC+ +H + PS + +PR+KW+ +S+
Sbjct: 23 SDHDNSLSVSIPQPSPLRVLLGTSLTIPCYFIDPMHPVTTAPSTAPL--APRIKWSRVSK 80
Query: 85 GREAEVLVARGVRVKVNEAYRFRVALPAYPASLTDVSLALSELRPNDSGIYRCEVQHGID 144
+E +LVA RV+VN AY+ +V+LP YPA +D +L + LR NDSG+YRCEV HGI+
Sbjct: 81 EKEVVLLVATEGRVRVNSAYQDKVSLPNYPAIPSDATLEVQSLRSNDSGVYRCEVMHGIE 140
Query: 145 DSSDAVEVKVKGVVFLYREGSARYAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCD 204
DS +EV VKG+VF YR S RY F AQ AC + A IATPEQL AAY G+ QCD
Sbjct: 141 DSEATLEVVVKGIVFHYRAISTRYTLDFDRAQRACLQNSAIIATPEQLQAAYEDGFHQCD 200
Query: 205 AGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVVDPDDLYDVYCYAEDLNGELFLGDP 264
AGWL+DQTVRYPI TPRE CYGD D FPGVR YG+ D ++ YDVYC+AE++ GE+F
Sbjct: 201 AGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGIRDTNETYDVYCFAEEMEGEVFYATS 260
Query: 265 PEKLTLEEARAYCQERGAEIATTGQLYAAWDGGLDHCSPGWLADGSVRYPIVTPSQRCGG 324
PEK T +EA C+ GA +ATTGQLY AW G+D CS GWLAD SVRYPI CGG
Sbjct: 261 PEKFTFQEAANECRRLGARLATTGQLYLAWQAGMDMCSAGWLADRSVRYPISKARPNCGG 320
Query: 325 GLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSAQPSAIPEASNPASNPASDGLEAIVTVT 384
L GV+T+++ NQTG+P+ SR++ C+ IPE N + + + TVT
Sbjct: 321 NLLGVRTVYVHANQTGYPDPSSRYDAICYTGEDFVD-IPE--NFFGVGGEEDI-TVQTVT 376
Query: 385 ETLEELQLPQEATESESRGAIYSI--PIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPP 442
EL LP+ TE E+RG++ PI E S +P +P E F +
Sbjct: 377 WPDMELPLPRNITEGEARGSVILTVKPIFE----VSPSPLEPEE------PFTFAPEIGA 426
Query: 443 TGFSEEEGKALE 454
T F+E E + E
Sbjct: 427 TAFAEVENETGE 438
Score = 325 bits (834), Expect = 9e-89
Identities = 203/555 (36%), Positives = 276/555 (49%), Gaps = 52/555 (9%)
Query: 353 FRDSAQPSAIPEASNPASNPASDGLEAIVTVTETLEELQLPQEATESESRGAIYSIPIME 412
F + S + S AS E + +E +E + P + E R + P +
Sbjct: 1894 FASTTNVSGESSVAMGTSGEASGLPEVTLITSEFVEGVTEPTISQELGQRPPVTHTPQLF 1953
Query: 413 DGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSEEEGKALEEEEKYEDEEEKEEEEEEE 472
+ G ST D + A L + P SE Y + E
Sbjct: 1954 ESSGKVSTAGDISGATPVLPGSGVEVSSVPESSSETSA--------YPEAGFGASAAPEA 2005
Query: 473 EVEDEALWAWPSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRP 532
ED S P+ S T A E +L ++ V S L E EAS
Sbjct: 2006 SRED-----------SGSPDLS-ETTSAFHEANLERSSGLGV---SGSTLTFQEGEASAA 2050
Query: 533 PRVHGPPTETLPTPRER-NLASPSPSTLVEAREV-GEATGGPELSGVPRG----ESEETG 586
P V G T T E L S +P+ + E+ G+ +G GV ESE T
Sbjct: 2051 PEVSGESTTTSDVGTEAPGLPSATPTASGDRTEISGDLSGHTSQLGVVISTSIPESEWTQ 2110
Query: 587 SSEGAPSLLPATRAPEGTRELEAPSEDNSGR--------TAPAGTSVQAQPVLPTDSASR 638
++ R E E+E+ S SG T+P S+ A P +S S
Sbjct: 2111 QTQ---------RPAETHLEIESSSLLYSGEETHTVETATSPTDASIPASPEWKRESES- 2160
Query: 639 GGVAVVPASGDCVPSPCHNGGTCLEEEEGVRCLCLPGYGGDLCDVGLRFCNPGWDAFQGA 698
A PA C PC GTC E E V CLC PGY G+ C++ C GW+ +QG
Sbjct: 2161 --TAAAPARS-CAEEPC-GAGTCKETEGHVICLCPPGYTGEHCNIDQEVCEEGWNKYQGH 2216
Query: 699 CYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRYREYQWIGLNDRTIEGDFLW 758
CY+HF R +W +AE +CR +HL+SI TPEEQ+F+NN ++YQWIGLNDRTIEGDF W
Sbjct: 2217 CYRHFPDRETWVDAERRCREQQSHLSSIVTPEEQEFVNNNAQDYQWIGLNDRTIEGDFRW 2276
Query: 759 SDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPP 818
SDG P+ +ENW P QPD++F +GE+CVVM+WH++G+W+DVPCNYHL +TCK G V+CG P
Sbjct: 2277 SDGHPMQFENWRPNQPDNFFAAGEDCVVMIWHEKGEWNDVPCNYHLPFTCKKGTVACGEP 2336
Query: 819 PELPLAQVFGRPRLRYEVDTVLRYRCREGLAQRNLPLIRCQENGRWEAPQISCV-PRRPA 877
P + A+ FG+ + RYE+++++RY+C EG QR++P IRCQ +G WE PQI+C P
Sbjct: 2337 PVVEHARTFGQKKDRYEINSLVRYQCTEGFVQRHMPTIRCQPSGHWEEPQITCTDPTTYK 2396
Query: 878 RALHPEEDPEGRQGR 892
R L R+ R
Sbjct: 2397 RRLQKRSSRHPRRSR 2411
Score = 290 bits (741), Expect = 5e-78
Identities = 192/505 (38%), Positives = 248/505 (49%), Gaps = 56/505 (11%)
Query: 156 GVVFLYREGSARYAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRY 215
GVVF YR G RY+ +F AQ+AC R GA IA+PEQL AAY GYEQCDAGWL DQTVRY
Sbjct: 477 GVVFHYRPGPTRYSLTFEEAQQACLRTGAVIASPEQLQAAYEAGYEQCDAGWLRDQTVRY 536
Query: 216 PIQTPREACYGDMDGFPGVRNYGVVDPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARA 275
PI +PR C GD D PGVR YGV + YDVYC+ + L GE+F E+ T +EA
Sbjct: 537 PIVSPRTPCVGDKDSSPGVRTYGVRPSTETYDVYCFVDRLEGEVFFATRLEQFTFQEALE 596
Query: 276 YCQERGAEIATTGQLYAAWDGGLDHCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLF 335
+C+ A +ATTGQLYAAW GLD C GWLADGS+RYPIVTP CGG PGV+T++L+
Sbjct: 597 FCESHNATLATTGQLYAAWSRGLDKCYAGWLADGSLRYPIVTPRPACGGDKPGVRTVYLY 656
Query: 336 PNQTGFPNKHSRFNVYCFRD-SAQPSAIPEASNPASNPASDGLEAIVTVTETLEELQLPQ 394
PNQTG P+ SR + +CFR SA PS E ++P+ G+E + VT+ +
Sbjct: 657 PNQTGLPDPLSRHHAFCFRGISAVPSPGEEEGGTPTSPS--GVEEWI-VTQVVP------ 707
Query: 395 EATESESRGAIYSIPIMEDGGGGSSTPEDPAEAPRTLLEFET--------QSMVPPTGFS 446
+ ++P+ E+ T P+ +LEF T + P G S
Sbjct: 708 ---------GVAAVPVEEE------TTAVPSGETTAILEFTTEPENQTEWEPAYTPVGTS 752
Query: 447 EEEGKALEEEEKYEDEEEKEEEEEEEEVEDEALWAWPSELSSPGPEASLPTEPAAQEESL 506
G EE E EV + PSE+ P E S EP S+
Sbjct: 753 PLPGILPTWPPTGAATEESTEGPSATEVPSASEEPSPSEVPFPSEEPSPSEEPF---PSV 809
Query: 507 SQAPARAVLQPGASPLPDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVG 566
P+ L P P P E S P P TP SP + E G
Sbjct: 810 RPFPS-VELFPSEEPFPSKEPSPSEEPSASEEPY----TP------SPPVPSWTELPSSG 858
Query: 567 EATGGPELSGVPRGESEETGSSEGAPSLLPATRAPEGTRELEAPSE--DNSGRTAPAGTS 624
E +G P++SG G + +G + + L G R PS D+SG T+ G+
Sbjct: 859 EESGAPDVSGDFTGSGDVSGHLDFSGQL-------SGDRASGLPSGDLDSSGLTSTVGSG 911
Query: 625 VQAQPVLPTDSASRGGVAVVPASGD 649
+ + LP+ R P G+
Sbjct: 912 LPVESGLPSGDEERIEWPSTPTVGE 936
Score = 39.3 bits (90), Expect = 0.017
Identities = 49/184 (26%), Positives = 67/184 (36%), Gaps = 33/184 (17%)
Query: 486 LSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPT----- 540
+S G + LP+ S P+ L AS PD E V G P+
Sbjct: 1572 ISGAGEISGLPSSELDISGRASGLPSGTELSGQASGSPDVSGEIPGLFGVSGQPSGFPDT 1631
Query: 541 --ETLPTPRERNLASPSPSTLVEAREV--------------GEATGGPELSGVPRGESEE 584
ET L+S P EA V GE +G P+LSG P G
Sbjct: 1632 SGETSGVTELSGLSSGQPGISGEASGVLYGTSQPFGITDLSGETSGVPDLSGQPSGLPGF 1691
Query: 585 TGSSEGAPSLLPATRAPEGTRELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAVV 644
+G++ G P L+ T + G ++SG T + V+ V PT G+ V
Sbjct: 1692 SGATSGVPDLVSGTTSGSG---------ESSGITFVDTSLVE---VAPTTFKEEEGLGSV 1739
Query: 645 PASG 648
SG
Sbjct: 1740 ELSG 1743
Score = 33.5 bits (75), Expect = 0.93
Identities = 40/143 (27%), Positives = 54/143 (37%), Gaps = 17/143 (11%)
Query: 508 QAPARAVLQPGASPLPDGESEASRPPR--------VHGPPTETLPTPRERNLASPSPSTL 559
QAP + L G S G S PP G PT +L + + S ++
Sbjct: 1504 QAPETSGLPSGFSGEYSGVDLGSGPPSGLPDFSGLPSGFPTVSLVDSTLVEVVTASTASE 1563
Query: 560 VEAREVGEATGGPELSGVPRGESEETGSSEGAPSLLPATRAPEGTRELEAPSEDNSGRTA 619
+E R +G E+SG+P E + +G + G PS + G S D SG
Sbjct: 1564 LEGRGTIGISGAGEISGLPSSELDISGRASGLPSGTELSGQASG-------SPDVSGE-I 1615
Query: 620 PAGTSVQAQPV-LPTDSASRGGV 641
P V QP P S GV
Sbjct: 1616 PGLFGVSGQPSGFPDTSGETSGV 1638
Score = 32.7 bits (73), Expect = 1.6
Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 489 PGPEASLPTEPAAQEESLSQAPARAVLQ---PGA---SPLPDGESEASRPPRVHG----P 538
P E T P +E +S P+ VL+ PG S LP GE + P V P
Sbjct: 1281 PSGEVLETTAPGVEE--ISGLPSGEVLETTAPGVDEISGLPSGEVLETTAPGVEEISGLP 1338
Query: 539 PTETLPTPRERNLASPSPSTLVEAREVGE--ATGGPELSGVPRGESEETGSSEGAPSLLP 596
E L T A S L EV E +G ++SG+P GE ET +S +
Sbjct: 1339 SGEVLETSTS---AVGDLSGLPSGGEVLEISVSGVEDISGLPSGEVVETSAS----GIED 1391
Query: 597 ATRAPEGT-RELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAVVPASGDCVPSPC 655
+ P G E A ++ R P+G + VL ++ G ++ +P+ G+ + +
Sbjct: 1392 VSELPSGEGLETSASGVEDLSR-LPSG-----EEVLEISASGFGDLSGLPSGGEGLETSA 1445
Query: 656 HNGGTCL 662
GT L
Sbjct: 1446 SEVGTDL 1452
Score = 32.3 bits (72), Expect = 2.1
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 25/151 (16%)
Query: 485 ELSSPGPE--ASLPT----EPAAQE-ESLSQAPARAVLQPGA------SPLPDGESEASR 531
E ++PG E + LP+ E AA E +S P+ VL+ A S LP GE +
Sbjct: 1097 ETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLETA 1156
Query: 532 PPRVHGPPTETLPTPRERNLASPSPSTL--VEAREVGE--ATGGPELSGVPRGESEETGS 587
P V LP+ A+P + + + EV E A G ++SG+P GE ET
Sbjct: 1157 APGVED--ISGLPSGEVLETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLET-- 1212
Query: 588 SEGAPSLLPATRAPEG-TRELEAPS-EDNSG 616
AP + + P G E AP ED SG
Sbjct: 1213 --AAPGVEDISGLPSGEVLETAAPGVEDISG 1241
Score = 32.0 bits (71), Expect = 2.7
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 25/151 (16%)
Query: 485 ELSSPGPE--ASLPTEPAAQE-----ESLSQAPARAVLQPGA------SPLPDGESEASR 531
E ++PG E + LP+ + E +S P+ VL+ A S LP GE +
Sbjct: 1059 ETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLETA 1118
Query: 532 PPRVHGPPTETLPTPRERNLASPSPSTL--VEAREVGE--ATGGPELSGVPRGESEETGS 587
P V LP+ A+P + + + EV E A G ++SG+P GE ET
Sbjct: 1119 APGVED--ISGLPSGEVLETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLET-- 1174
Query: 588 SEGAPSLLPATRAPEG-TRELEAPS-EDNSG 616
AP + + P G E AP ED SG
Sbjct: 1175 --AAPGVEDISGLPSGEVLETAAPGVEDISG 1203
Score = 32.0 bits (71), Expect = 2.7
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 504 ESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAR 563
E +S P+ V++ AS + D S G ET + E PS ++E
Sbjct: 1371 EDISGLPSGEVVETSASGIEDVSELPS------GEGLETSASGVEDLSRLPSGEEVLEI- 1423
Query: 564 EVGEATGGPELSGVPRG-ESEETGSSEGAPSLLPATRAPEGTRELEAPSEDNSG 616
A+G +LSG+P G E ET +SE L EG + +ED SG
Sbjct: 1424 ---SASGFGDLSGLPSGGEGLETSASEVGTDLSGLPSGREGLETSASGAEDLSG 1474
Score = 31.6 bits (70), Expect = 3.5
Identities = 47/151 (31%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 485 ELSSPGPE--ASLPTEPAAQE-----ESLSQAPARAVLQ---PGA---SPLPDGESEASR 531
E ++PG E + LP+ + E +S P+ VL+ PG S LP GE +
Sbjct: 1021 ETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLETT 1080
Query: 532 PPRVHGPPTETLPTPRERNLASPSPSTL--VEAREVGE--ATGGPELSGVPRGESEETGS 587
P V LP+ A+P + + + EV E A G ++SG+P GE ET
Sbjct: 1081 APGVED--ISGLPSGEVLETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLET-- 1136
Query: 588 SEGAPSLLPATRAPEG-TRELEAPS-EDNSG 616
AP + + P G E AP ED SG
Sbjct: 1137 --AAPGVEDISGLPSGEVLETAAPGVEDISG 1165
Score = 31.6 bits (70), Expect = 3.5
Identities = 50/162 (30%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 485 ELSSPGPE--ASLPT----EPAAQE-ESLSQAPARAVLQPGA------SPLPDGESEASR 531
E ++PG E + LP+ E AA E +S P+ VL+ A S LP GE +
Sbjct: 1230 ETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLETT 1289
Query: 532 PPRVHGPPTETLPTPRERNLASPSPSTL--VEAREVGEAT--GGPELSGVPRGESEETGS 587
P V LP+ +P + + + EV E T G E+SG+P GE ET +
Sbjct: 1290 APGVE--EISGLPSGEVLETTAPGVDEISGLPSGEVLETTAPGVEEISGLPSGEVLETST 1347
Query: 588 SEGAPSLLPATRAPEGTRELE---APSEDNSGRTAPAGTSVQ 626
S ++ + P G LE + ED SG P+G V+
Sbjct: 1348 S----AVGDLSGLPSGGEVLEISVSGVEDISG--LPSGEVVE 1383
Score = 30.8 bits (68), Expect = 6.0
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 25/151 (16%)
Query: 485 ELSSPGPE--ASLPTEPAAQE-----ESLSQAPARAVLQ---PGA---SPLPDGESEASR 531
E ++PG E + LP+ + E +S P+ VL+ PG S LP GE +
Sbjct: 983 ETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLETT 1042
Query: 532 PPRVHGPPTETLPTPRERNLASPSPSTL--VEAREVGEAT--GGPELSGVPRGESEETGS 587
P V LP+ +P + + + EV E T G ++SG+P GE ET
Sbjct: 1043 APGVED--ISGLPSGEVLETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLET-- 1098
Query: 588 SEGAPSLLPATRAPEG-TRELEAPS-EDNSG 616
AP + + P G E AP ED SG
Sbjct: 1099 --AAPGVEDISGLPSGEVLETAAPGVEDISG 1127
>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
Length = 2317
Score = 369 bits (946), Expect = e-102
Identities = 203/432 (46%), Positives = 265/432 (61%), Gaps = 22/432 (5%)
Query: 29 SSEDRAFRVRIAGDAPLQGVLGGALTIPCH----VHYLRPPPSRRAVLGSPRVKWTFLSR 84
S D + V I +PL+ +LG +LTIPC+ +H + PS + +PR+KW+ +S+
Sbjct: 23 SDHDNSLSVSIPQPSPLRVLLGTSLTIPCYFIDPMHPVTTAPSTAPL--APRIKWSRVSK 80
Query: 85 GREAEVLVARGVRVKVNEAYRFRVALPAYPASLTDVSLALSELRPNDSGIYRCEVQHGID 144
+E +LVA RV+VN AY+ +V+LP YPA +D +L + LR NDSG+YRCEV HGI+
Sbjct: 81 EKEVVLLVATEGRVRVNSAYQDKVSLPNYPAIPSDATLEVQSLRSNDSGVYRCEVMHGIE 140
Query: 145 DSSDAVEVKVKGVVFLYREGSARYAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCD 204
DS +EV VKG+VF YR S RY F AQ AC + A IATPEQL AAY G+ QCD
Sbjct: 141 DSEATLEVVVKGIVFHYRAISTRYTLDFDRAQRACLQNSAIIATPEQLQAAYEDGFHQCD 200
Query: 205 AGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVVDPDDLYDVYCYAEDLNGELFLGDP 264
AGWL+DQTVRYPI TPRE CYGD D FPGVR YG+ D ++ YDVYC+AE++ GE+F
Sbjct: 201 AGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGIRDTNETYDVYCFAEEMEGEVFYATS 260
Query: 265 PEKLTLEEARAYCQERGAEIATTGQLYAAWDGGLDHCSPGWLADGSVRYPIVTPSQRCGG 324
PEK T +EA C+ GA +ATTGQLY AW G+D CS GWLAD SVRYPI CGG
Sbjct: 261 PEKFTFQEAANECRRLGARLATTGQLYLAWQAGMDMCSAGWLADRSVRYPISKARPNCGG 320
Query: 325 GLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSAQPSAIPEASNPASNPASDGLEAIVTVT 384
L GV+T+++ NQTG+P+ SR++ C+ IPE N + + + TVT
Sbjct: 321 NLLGVRTVYVHANQTGYPDPSSRYDAICYTGEDFVD-IPE--NFFGVGGEEDI-TVQTVT 376
Query: 385 ETLEELQLPQEATESESRGAIYSI--PIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPP 442
EL LP+ TE E+RG++ PI E S +P +P E F +
Sbjct: 377 WPDMELPLPRNITEGEARGSVILTVKPIFE----VSPSPLEPEE------PFTFAPEIGA 426
Query: 443 TGFSEEEGKALE 454
T F+E E + E
Sbjct: 427 TAFAEVENETGE 438
Score = 290 bits (741), Expect = 5e-78
Identities = 192/505 (38%), Positives = 248/505 (49%), Gaps = 56/505 (11%)
Query: 156 GVVFLYREGSARYAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRY 215
GVVF YR G RY+ +F AQ+AC R GA IA+PEQL AAY GYEQCDAGWL DQTVRY
Sbjct: 477 GVVFHYRPGPTRYSLTFEEAQQACLRTGAVIASPEQLQAAYEAGYEQCDAGWLRDQTVRY 536
Query: 216 PIQTPREACYGDMDGFPGVRNYGVVDPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARA 275
PI +PR C GD D PGVR YGV + YDVYC+ + L GE+F E+ T +EA
Sbjct: 537 PIVSPRTPCVGDKDSSPGVRTYGVRPSTETYDVYCFVDRLEGEVFFATRLEQFTFQEALE 596
Query: 276 YCQERGAEIATTGQLYAAWDGGLDHCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLF 335
+C+ A +ATTGQLYAAW GLD C GWLADGS+RYPIVTP CGG PGV+T++L+
Sbjct: 597 FCESHNATLATTGQLYAAWSRGLDKCYAGWLADGSLRYPIVTPRPACGGDKPGVRTVYLY 656
Query: 336 PNQTGFPNKHSRFNVYCFRD-SAQPSAIPEASNPASNPASDGLEAIVTVTETLEELQLPQ 394
PNQTG P+ SR + +CFR SA PS E ++P+ G+E + VT+ +
Sbjct: 657 PNQTGLPDPLSRHHAFCFRGISAVPSPGEEEGGTPTSPS--GVEEWI-VTQVVP------ 707
Query: 395 EATESESRGAIYSIPIMEDGGGGSSTPEDPAEAPRTLLEFET--------QSMVPPTGFS 446
+ ++P+ E+ T P+ +LEF T + P G S
Sbjct: 708 ---------GVAAVPVEEE------TTAVPSGETTAILEFTTEPENQTEWEPAYTPVGTS 752
Query: 447 EEEGKALEEEEKYEDEEEKEEEEEEEEVEDEALWAWPSELSSPGPEASLPTEPAAQEESL 506
G EE E EV + PSE+ P E S EP S+
Sbjct: 753 PLPGILPTWPPTGAATEESTEGPSATEVPSASEEPSPSEVPFPSEEPSPSEEPF---PSV 809
Query: 507 SQAPARAVLQPGASPLPDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVG 566
P+ L P P P E S P P TP SP + E G
Sbjct: 810 RPFPS-VELFPSEEPFPSKEPSPSEEPSASEEPY----TP------SPPVPSWTELPSSG 858
Query: 567 EATGGPELSGVPRGESEETGSSEGAPSLLPATRAPEGTRELEAPSE--DNSGRTAPAGTS 624
E +G P++SG G + +G + + L G R PS D+SG T+ G+
Sbjct: 859 EESGAPDVSGDFTGSGDVSGHLDFSGQL-------SGDRASGLPSGDLDSSGLTSTVGSG 911
Query: 625 VQAQPVLPTDSASRGGVAVVPASGD 649
+ + LP+ R P G+
Sbjct: 912 LPVESGLPSGDEERIEWPSTPTVGE 936
Score = 207 bits (527), Expect = 4e-53
Identities = 126/330 (38%), Positives = 168/330 (50%), Gaps = 32/330 (9%)
Query: 498 EPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPTETLPTPRERNLASPSP- 556
E ++ ES S+ A GAS P+ E S P + +ET E NL S
Sbjct: 1978 EVSSVPESSSETSAYPEAGFGASAAPEASREDSGSPDL----SETTSAFHEANLERSSGL 2033
Query: 557 ----STLVEAREVGEATGGPELSGVPRGESEETGSSEGAPSLLPATRAPEGTRELEAPSE 612
STL + GEA+ PE+SG S+ + G PS AT G R S
Sbjct: 2034 GVSGSTLTF--QEGEASAAPEVSGESTTTSDVGTEAPGLPS---ATPTASGDRT--EISG 2086
Query: 613 DNSGRTAPAGTSVQAQPVLPTDSASRGGVAVVPASGDCVPSPCHNGGTCLEEEEGVRCLC 672
D SG T+ G + +P ++ + S G EE V
Sbjct: 2087 DLSGHTSQLGVVISTS--IPESEWTQQTQRPAETHLEIESSSLLYSG---EETHTVETAT 2141
Query: 673 LPGYGG-----------DLCDVGLRFCNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGA 721
P + C GW+ +QG CY+HF R +W +AE +CR +
Sbjct: 2142 SPTDASIPASPEWKRESESTAADQEVCEEGWNKYQGHCYRHFPDRETWVDAERRCREQQS 2201
Query: 722 HLASISTPEEQDFINNRYREYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSG 781
HL+SI TPEEQ+F+NN ++YQWIGLNDRTIEGDF WSDG P+ +ENW P QPD++F +G
Sbjct: 2202 HLSSIVTPEEQEFVNNNAQDYQWIGLNDRTIEGDFRWSDGHPMQFENWRPNQPDNFFAAG 2261
Query: 782 ENCVVMVWHDQGQWSDVPCNYHLSYTCKMG 811
E+CVVM+WH++G+W+DVPCNYHL +TCK G
Sbjct: 2262 EDCVVMIWHEKGEWNDVPCNYHLPFTCKKG 2291
Score = 39.3 bits (90), Expect = 0.017
Identities = 49/184 (26%), Positives = 67/184 (36%), Gaps = 33/184 (17%)
Query: 486 LSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPT----- 540
+S G + LP+ S P+ L AS PD E V G P+
Sbjct: 1572 ISGAGEISGLPSSELDISGRASGLPSGTELSGQASGSPDVSGEIPGLFGVSGQPSGFPDT 1631
Query: 541 --ETLPTPRERNLASPSPSTLVEAREV--------------GEATGGPELSGVPRGESEE 584
ET L+S P EA V GE +G P+LSG P G
Sbjct: 1632 SGETSGVTELSGLSSGQPGISGEASGVLYGTSQPFGITDLSGETSGVPDLSGQPSGLPGF 1691
Query: 585 TGSSEGAPSLLPATRAPEGTRELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAVV 644
+G++ G P L+ T + G ++SG T + V+ V PT G+ V
Sbjct: 1692 SGATSGVPDLVSGTTSGSG---------ESSGITFVDTSLVE---VAPTTFKEEEGLGSV 1739
Query: 645 PASG 648
SG
Sbjct: 1740 ELSG 1743
Score = 33.5 bits (75), Expect = 0.93
Identities = 40/143 (27%), Positives = 54/143 (37%), Gaps = 17/143 (11%)
Query: 508 QAPARAVLQPGASPLPDGESEASRPPR--------VHGPPTETLPTPRERNLASPSPSTL 559
QAP + L G S G S PP G PT +L + + S ++
Sbjct: 1504 QAPETSGLPSGFSGEYSGVDLGSGPPSGLPDFSGLPSGFPTVSLVDSTLVEVVTASTASE 1563
Query: 560 VEAREVGEATGGPELSGVPRGESEETGSSEGAPSLLPATRAPEGTRELEAPSEDNSGRTA 619
+E R +G E+SG+P E + +G + G PS + G S D SG
Sbjct: 1564 LEGRGTIGISGAGEISGLPSSELDISGRASGLPSGTELSGQASG-------SPDVSGE-I 1615
Query: 620 PAGTSVQAQPV-LPTDSASRGGV 641
P V QP P S GV
Sbjct: 1616 PGLFGVSGQPSGFPDTSGETSGV 1638
Score = 32.7 bits (73), Expect = 1.6
Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 489 PGPEASLPTEPAAQEESLSQAPARAVLQ---PGA---SPLPDGESEASRPPRVHG----P 538
P E T P +E +S P+ VL+ PG S LP GE + P V P
Sbjct: 1281 PSGEVLETTAPGVEE--ISGLPSGEVLETTAPGVDEISGLPSGEVLETTAPGVEEISGLP 1338
Query: 539 PTETLPTPRERNLASPSPSTLVEAREVGE--ATGGPELSGVPRGESEETGSSEGAPSLLP 596
E L T A S L EV E +G ++SG+P GE ET +S +
Sbjct: 1339 SGEVLETSTS---AVGDLSGLPSGGEVLEISVSGVEDISGLPSGEVVETSAS----GIED 1391
Query: 597 ATRAPEGT-RELEAPSEDNSGRTAPAGTSVQAQPVLPTDSASRGGVAVVPASGDCVPSPC 655
+ P G E A ++ R P+G + VL ++ G ++ +P+ G+ + +
Sbjct: 1392 VSELPSGEGLETSASGVEDLSR-LPSG-----EEVLEISASGFGDLSGLPSGGEGLETSA 1445
Query: 656 HNGGTCL 662
GT L
Sbjct: 1446 SEVGTDL 1452
Score = 32.3 bits (72), Expect = 2.1
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 25/151 (16%)
Query: 485 ELSSPGPE--ASLPT----EPAAQE-ESLSQAPARAVLQPGA------SPLPDGESEASR 531
E ++PG E + LP+ E AA E +S P+ VL+ A S LP GE +
Sbjct: 1097 ETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLETA 1156
Query: 532 PPRVHGPPTETLPTPRERNLASPSPSTL--VEAREVGE--ATGGPELSGVPRGESEETGS 587
P V LP+ A+P + + + EV E A G ++SG+P GE ET
Sbjct: 1157 APGVED--ISGLPSGEVLETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLET-- 1212
Query: 588 SEGAPSLLPATRAPEG-TRELEAPS-EDNSG 616
AP + + P G E AP ED SG
Sbjct: 1213 --AAPGVEDISGLPSGEVLETAAPGVEDISG 1241
Score = 32.0 bits (71), Expect = 2.7
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 25/151 (16%)
Query: 485 ELSSPGPE--ASLPTEPAAQE-----ESLSQAPARAVLQPGA------SPLPDGESEASR 531
E ++PG E + LP+ + E +S P+ VL+ A S LP GE +
Sbjct: 1059 ETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLETA 1118
Query: 532 PPRVHGPPTETLPTPRERNLASPSPSTL--VEAREVGE--ATGGPELSGVPRGESEETGS 587
P V LP+ A+P + + + EV E A G ++SG+P GE ET
Sbjct: 1119 APGVED--ISGLPSGEVLETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLET-- 1174
Query: 588 SEGAPSLLPATRAPEG-TRELEAPS-EDNSG 616
AP + + P G E AP ED SG
Sbjct: 1175 --AAPGVEDISGLPSGEVLETAAPGVEDISG 1203
Score = 32.0 bits (71), Expect = 2.7
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 504 ESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAR 563
E +S P+ V++ AS + D S G ET + E PS ++E
Sbjct: 1371 EDISGLPSGEVVETSASGIEDVSELPS------GEGLETSASGVEDLSRLPSGEEVLEI- 1423
Query: 564 EVGEATGGPELSGVPRG-ESEETGSSEGAPSLLPATRAPEGTRELEAPSEDNSG 616
A+G +LSG+P G E ET +SE L EG + +ED SG
Sbjct: 1424 ---SASGFGDLSGLPSGGEGLETSASEVGTDLSGLPSGREGLETSASGAEDLSG 1474
Score = 31.6 bits (70), Expect = 3.5
Identities = 47/151 (31%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 485 ELSSPGPE--ASLPTEPAAQE-----ESLSQAPARAVLQ---PGA---SPLPDGESEASR 531
E ++PG E + LP+ + E +S P+ VL+ PG S LP GE +
Sbjct: 1021 ETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLETT 1080
Query: 532 PPRVHGPPTETLPTPRERNLASPSPSTL--VEAREVGE--ATGGPELSGVPRGESEETGS 587
P V LP+ A+P + + + EV E A G ++SG+P GE ET
Sbjct: 1081 APGVED--ISGLPSGEVLETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLET-- 1136
Query: 588 SEGAPSLLPATRAPEG-TRELEAPS-EDNSG 616
AP + + P G E AP ED SG
Sbjct: 1137 --AAPGVEDISGLPSGEVLETAAPGVEDISG 1165
Score = 31.6 bits (70), Expect = 3.5
Identities = 50/162 (30%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 485 ELSSPGPE--ASLPT----EPAAQE-ESLSQAPARAVLQPGA------SPLPDGESEASR 531
E ++PG E + LP+ E AA E +S P+ VL+ A S LP GE +
Sbjct: 1230 ETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLETAAPGVEDISGLPSGEVLETT 1289
Query: 532 PPRVHGPPTETLPTPRERNLASPSPSTL--VEAREVGEAT--GGPELSGVPRGESEETGS 587
P V LP+ +P + + + EV E T G E+SG+P GE ET +
Sbjct: 1290 APGVE--EISGLPSGEVLETTAPGVDEISGLPSGEVLETTAPGVEEISGLPSGEVLETST 1347
Query: 588 SEGAPSLLPATRAPEGTRELE---APSEDNSGRTAPAGTSVQ 626
S ++ + P G LE + ED SG P+G V+
Sbjct: 1348 S----AVGDLSGLPSGGEVLEISVSGVEDISG--LPSGEVVE 1383
Score = 30.8 bits (68), Expect = 6.0
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 25/151 (16%)
Query: 485 ELSSPGPE--ASLPTEPAAQE-----ESLSQAPARAVLQ---PGA---SPLPDGESEASR 531
E ++PG E + LP+ + E +S P+ VL+ PG S LP GE +
Sbjct: 983 ETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLETT 1042
Query: 532 PPRVHGPPTETLPTPRERNLASPSPSTL--VEAREVGEAT--GGPELSGVPRGESEETGS 587
P V LP+ +P + + + EV E T G ++SG+P GE ET
Sbjct: 1043 APGVED--ISGLPSGEVLETTAPGVEDISGLPSGEVLETTAPGVEDISGLPSGEVLET-- 1098
Query: 588 SEGAPSLLPATRAPEG-TRELEAPS-EDNSG 616
AP + + P G E AP ED SG
Sbjct: 1099 --AAPGVEDISGLPSGEVLETAAPGVEDISG 1127
>gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]
Length = 1321
Score = 332 bits (851), Expect = 1e-90
Identities = 182/447 (40%), Positives = 256/447 (57%), Gaps = 17/447 (3%)
Query: 4 LFLPLLAALVLAQAPAALADVLEGDSSEDRAFRVRIAGDAPLQGVLGGALTIPCHVHYLR 63
L L +L L+ D+ + + +R ++ G +Q L + +PC + L+
Sbjct: 9 LGLLMLQMLLFVAGEQGTQDITD---ASERGLHMQKLGSGSVQAALAELVALPC-LFTLQ 64
Query: 64 PPPSRRAVLGSPRVKWTFL----SRGREAEVLVARGVRVKVNEAYRFRVALPAYPASLTD 119
P PS A +PR+KWT + + ++ +LVA+ V+V ++++ RV+LP+YP +
Sbjct: 65 PRPS--AARDAPRIKWTKVRTASGQRQDLPILVAKDNVVRVAKSWQGRVSLPSYPRRRAN 122
Query: 120 VSLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFSGAQEAC 179
+L L LR +DSG+YRC+V GI+D D V ++V GVVF YR RYA +F+ AQEAC
Sbjct: 123 ATLLLGPLRASDSGLYRCQVVRGIEDEQDLVPLEVTGVVFHYRSARDRYALTFAEAQEAC 182
Query: 180 ARIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGV 239
A IA P L AA+ G++ CDAGWLSD+TVRYPI R CYGD PGVR+YG
Sbjct: 183 RLSSAIIAAPRHLQAAFEDGFDNCDAGWLSDRTVRYPITQSRPGCYGDRSSLPGVRSYGR 242
Query: 240 VDPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIATTGQLYAAWDGGLD 299
+P +LYDVYC+A +L GE+F P +LTL ARA C+ +GA +A+ GQL+ AW GLD
Sbjct: 243 RNPQELYDVYCFARELGGEVFYVGPARRLTLAGARAQCRRQGAALASVGQLHLAWHEGLD 302
Query: 300 HCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSAQP 359
C PGWLADGSVRYPI TP +RCGG PGV+T++ F N+TGFP+ RF+ YCFR
Sbjct: 303 QCDPGWLADGSVRYPIQTPRRRCGGPAPGVRTVYRFANRTGFPSPAERFDAYCFRAHHPT 362
Query: 360 SAIPEASNPASNPASDGLEAIVTVTETLEELQLPQEATESESRGAIYSIPIMEDGGGGSS 419
S + P+S + L A LE +E + + P++ G +
Sbjct: 363 SQHGDLETPSSGDEGEILSAEGPPVRELEPTLEEEEVVTPD-----FQEPLVSSGEEETL 417
Query: 420 TPEDPAEAPRTLLEFETQSMVP--PTG 444
E+ E+ +TL M+ PTG
Sbjct: 418 ILEEKQESQQTLSPTPGDPMLASWPTG 444
Score = 294 bits (753), Expect = 2e-79
Identities = 185/526 (35%), Positives = 255/526 (48%), Gaps = 48/526 (9%)
Query: 364 EASNPASNPASDGLEAIVTVTETLEELQLPQEA-TESESRGAIYSIP-----IMEDGGGG 417
+AS+P++ S G+ + VT LE E T + + P I E G
Sbjct: 791 DASSPSAPLGSPGVFLVPKVTPNLEPWVATDEGPTVNPMDSTVTPAPSDASGIWEPGSQV 850
Query: 418 SSTPEDPAEAPRTLLEFETQSMVPPTGFSEEEGKALEEEEKYEDEEEKEEEEEEEEVEDE 477
E +P+ L+ T + P T + + + + E E++VE +
Sbjct: 851 FEEAESTTLSPQVALD--TSIVTPLTTLEQGDKVGVPAMSTLGSSSSQPHPEPEDQVETQ 908
Query: 478 ALWAWPSELSSPGPEASLPTEPAAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHG 537
S S P ++S +PA + P A+ + + S +S P V
Sbjct: 909 GT----SGASVPPHQSSPLGKPAVPPGT-----------PTAASVGESASVSSGEPTVPW 953
Query: 538 PPTETLPTPRERNLASPSPSTL-VEAREVGEATGGPELSGVPRGESEETGSSEGAPSLLP 596
P+ TL P TL +E E+ G P GV E E A LP
Sbjct: 954 DPSSTL-----------LPVTLGIEDFELEVLAGSP---GVESFWEEVASGEEPA---LP 996
Query: 597 ATRAPEGTRELEA-PSEDNSGRTAPAGTSVQAQPVLPTDSASRG--GVAVVPASGDCVPS 653
T G E+ + P E+N G + A + S +G G DC+ S
Sbjct: 997 GTPMNAGAEEVHSDPCENNP---CLHGGTCNANGTMYGCSCDQGFAGENCEIDIDDCLCS 1053
Query: 654 PCHNGGTCLEEEEGVRCLCLPGYGGDLCDVGLRFCNPGWDAFQGACYKHFSTRRSWEEAE 713
PC NGGTC++E G CLCLP YGG C+ C+ GW FQG CY++F+ RR+WE+AE
Sbjct: 1054 PCENGGTCIDEVNGFVCLCLPSYGGSFCEKDTEGCDRGWHKFQGHCYRYFAHRRAWEDAE 1113
Query: 714 TQCRMYGAHLASISTPEEQDFINNRYREYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQ 773
CR HL S+ +PEE FIN+ E WIGLNDR +E DF W+D L +ENW Q
Sbjct: 1114 KDCRRRSGHLTSVHSPEEHSFINSFGHENTWIGLNDRIVERDFQWTDNTGLQFENWRENQ 1173
Query: 774 PDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPELPLAQVFGRPRLR 833
PD++F GE+CVVMV H+ G+W+DVPCNY+L Y CK G V CGPPP + A + G + +
Sbjct: 1174 PDNFFAGGEDCVVMVAHESGRWNDVPCNYNLPYVCKKGTVLCGPPPAVENASLIGARKAK 1233
Query: 834 YEVDTVLRYRCREGLAQRNLPLIRCQENGRWEAPQISCV-PRRPAR 878
Y V +RY+C EG AQ ++ IRC+ NG+W+ PQI C PRR R
Sbjct: 1234 YNVHATVRYQCNEGFAQHHVATIRCRSNGKWDRPQIVCTKPRRSHR 1279
>gi|21361116 versican isoform 1 [Homo sapiens]
Length = 3396
Score = 324 bits (830), Expect = 3e-88
Identities = 176/446 (39%), Positives = 251/446 (56%), Gaps = 24/446 (5%)
Query: 36 RVRIAGDAPLQGVLGGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRGR------EAE 89
+V++ P++G L G +++PCH + P R+KW+ + + E
Sbjct: 23 KVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSEFLRIKWSKIEVDKNGKDLKETT 82
Query: 90 VLVARGVRVKVNEAYRFRVALPAYPASLTDVSLALSELRPNDSGIYRCEVQHGIDDSSDA 149
VLVA+ +K+ + Y+ RV++P +P ++ D SL + +L +D+G+YRC+V +GI+D+ D
Sbjct: 83 VLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKLLASDAGLYRCDVMYGIEDTQDT 142
Query: 150 VEVKVKGVVFLYREGSARYAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCDAGWLS 209
V + V GVVF YR ++RY +F AQ+AC +GA IATPEQL+AAY G+EQCDAGWL+
Sbjct: 143 VSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIATPEQLFAAYEDGFEQCDAGWLA 202
Query: 210 DQTVRYPIQTPREACYGDMDGFPGVRNYGVVDPDDLYDVYCYAEDLNGELFLGDPPEKLT 269
DQTVRYPI+ PR CYGD G GVR YG P + YDVYCY + L+G++F P K T
Sbjct: 203 DQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYDVYCYVDHLDGDVFHLTVPSKFT 262
Query: 270 LEEARAYCQERGAEIATTGQLYAAWDGGLDHCSPGWLADGSVRYPIVTPSQRCGGGLPGV 329
EEA C+ + A +AT G+L AAW G D C GWL+D SVR+P+ +CGGGL GV
Sbjct: 263 FEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLSDASVRHPVTVARAQCGGGLLGV 322
Query: 330 KTLFLFPNQTGFPNKHSRFNVYCFR----DSAQPSAIPEASNPASNP----ASDGLEAIV 381
+TL+ F NQTGFP SRF+ YCF+ + S + E ++P+ + SD I+
Sbjct: 323 RTLYRFENQTGFPPPDSRFDAYCFKPKEATTIDLSILAETASPSLSKEPQMVSDRTTPII 382
Query: 382 TVTETLEELQLPQEATESESRGAIYSIPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVP 441
+ + +LP TE G I S + P+ ++ T L T S
Sbjct: 383 PLVD-----ELPVIPTEFPPVGNIVSFE-----QKATVQPQAITDSLATKLPTPTGSTKK 432
Query: 442 PTGFSEEEGKALEEEEKYEDEEEKEE 467
P + A K + E KEE
Sbjct: 433 PWDMDDYSPSASGPLGKLDISEIKEE 458
Score = 300 bits (768), Expect = 4e-81
Identities = 186/557 (33%), Positives = 277/557 (49%), Gaps = 60/557 (10%)
Query: 346 SRFNVYCFRDSAQPSAIPEASNPASNPASDGLEAIVTVTETLEELQLPQEATESESRGAI 405
S +Y +++ + IP+ P++ P D ++++ ++ +E+ + EAT S
Sbjct: 2827 SPLTIYSGSEASGHTEIPQ---PSALPGIDVGSSVMSPQDSFKEIHVNIEATFKPSSEEY 2883
Query: 406 YSIPIMEDGGGGSSTPEDPAE---APRTLLEFETQSMVPPTGFSEEEGKALEEEEKYEDE 462
+ I E T +P+E P L E E S E A+E E +D
Sbjct: 2884 --LHITEPPSLSPDTKLEPSEDDGKPELLEEMEA---------SPTELIAVEGTEILQDF 2932
Query: 463 EEKEEEEEEEEVEDEALWAWPSELSSPGPEASLPTEPAAQEESLSQAP----------AR 512
+ K + + V EA+ +P+ + +P + T + E +Q P
Sbjct: 2933 QNKTDGQ----VSGEAIKMFPT-IKTPEAGTVITTADEIELEGATQWPHSTSASATYGVE 2987
Query: 513 AVLQPGASPLPDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVGE-ATGG 571
A + P SP S P ++ L ++ +A+ + + AT
Sbjct: 2988 AGVVPWLSPQTSERPTLSSSPEINPETQAALIRGQDSTIAASEQQVAARILDSNDQATVN 3047
Query: 572 PELSGVPRGESEETGSSEGAP--SLLPATRAPEGTRELEAPSEDNSGRTAPAGTSVQAQP 629
P E + P SLL + + + S + + P + P
Sbjct: 3048 PV----------EFNTEVATPPFSLLETSNETDFLIGINEESVEGTAIYLPGPDRCKMNP 3097
Query: 630 VL------PTDSASRGGVAVVPASGD--------CVPSPCHNGGTCLEEEEGVRCLCLPG 675
L PT++ S V SGD C +PC NG TC++ RCLCLP
Sbjct: 3098 CLNGGTCYPTET-SYVCTCVPGYSGDQCELDFDECHSNPCRNGATCVDGFNTFRCLCLPS 3156
Query: 676 YGGDLCDVGLRFCNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI 735
Y G LC+ C+ GW FQG CYK+F+ RR+W+ AE +CR+ GAHL SI + EEQ F+
Sbjct: 3157 YVGALCEQDTETCDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAHLTSILSHEEQMFV 3216
Query: 736 NNRYREYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQW 795
N +YQWIGLND+ E DF W+DG L YENW P QPDS+F +GE+CVV++WH+ GQW
Sbjct: 3217 NRVGHDYQWIGLNDKMFEHDFRWTDGSTLQYENWRPNQPDSFFSAGEDCVVIIWHENGQW 3276
Query: 796 SDVPCNYHLSYTCKMGLVSCGPPPELPLAQVFGRPRLRYEVDTVLRYRCREGLAQRNLPL 855
+DVPCNYHL+YTCK G V+CG PP + A+ FG+ + RYE+++++RY C++G QR+LP
Sbjct: 3277 NDVPCNYHLTYTCKKGTVACGQPPVVENAKTFGKMKPRYEINSLIRYHCKDGFIQRHLPT 3336
Query: 856 IRCQENGRWEAPQISCV 872
IRC NGRW P+I+C+
Sbjct: 3337 IRCLGNGRWAIPKITCM 3353
>gi|187607300 versican isoform 2 [Homo sapiens]
Length = 655
Score = 322 bits (826), Expect = 8e-88
Identities = 151/325 (46%), Positives = 210/325 (64%), Gaps = 6/325 (1%)
Query: 36 RVRIAGDAPLQGVLGGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRGR------EAE 89
+V++ P++G L G +++PCH + P R+KW+ + + E
Sbjct: 23 KVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSEFLRIKWSKIEVDKNGKDLKETT 82
Query: 90 VLVARGVRVKVNEAYRFRVALPAYPASLTDVSLALSELRPNDSGIYRCEVQHGIDDSSDA 149
VLVA+ +K+ + Y+ RV++P +P ++ D SL + +L +D+G+YRC+V +GI+D+ D
Sbjct: 83 VLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKLLASDAGLYRCDVMYGIEDTQDT 142
Query: 150 VEVKVKGVVFLYREGSARYAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCDAGWLS 209
V + V GVVF YR ++RY +F AQ+AC +GA IATPEQL+AAY G+EQCDAGWL+
Sbjct: 143 VSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIATPEQLFAAYEDGFEQCDAGWLA 202
Query: 210 DQTVRYPIQTPREACYGDMDGFPGVRNYGVVDPDDLYDVYCYAEDLNGELFLGDPPEKLT 269
DQTVRYPI+ PR CYGD G GVR YG P + YDVYCY + L+G++F P K T
Sbjct: 203 DQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYDVYCYVDHLDGDVFHLTVPSKFT 262
Query: 270 LEEARAYCQERGAEIATTGQLYAAWDGGLDHCSPGWLADGSVRYPIVTPSQRCGGGLPGV 329
EEA C+ + A +AT G+L AAW G D C GWL+D SVR+P+ +CGGGL GV
Sbjct: 263 FEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLSDASVRHPVTVARAQCGGGLLGV 322
Query: 330 KTLFLFPNQTGFPNKHSRFNVYCFR 354
+TL+ F NQTGFP SRF+ YCF+
Sbjct: 323 RTLYRFENQTGFPPPDSRFDAYCFK 347
Score = 296 bits (758), Expect = 6e-80
Identities = 122/224 (54%), Positives = 163/224 (72%)
Query: 649 DCVPSPCHNGGTCLEEEEGVRCLCLPGYGGDLCDVGLRFCNPGWDAFQGACYKHFSTRRS 708
+C +PC NG TC++ RCLCLP Y G LC+ C+ GW FQG CYK+F+ RR+
Sbjct: 389 ECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYFAHRRT 448
Query: 709 WEEAETQCRMYGAHLASISTPEEQDFINNRYREYQWIGLNDRTIEGDFLWSDGVPLLYEN 768
W+ AE +CR+ GAHL SI + EEQ F+N +YQWIGLND+ E DF W+DG L YEN
Sbjct: 449 WDAAERECRLQGAHLTSILSHEEQMFVNRVGHDYQWIGLNDKMFEHDFRWTDGSTLQYEN 508
Query: 769 WNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPELPLAQVFG 828
W P QPDS+F +GE+CVV++WH+ GQW+DVPCNYHL+YTCK G V+CG PP + A+ FG
Sbjct: 509 WRPNQPDSFFSAGEDCVVIIWHENGQWNDVPCNYHLTYTCKKGTVACGQPPVVENAKTFG 568
Query: 829 RPRLRYEVDTVLRYRCREGLAQRNLPLIRCQENGRWEAPQISCV 872
+ + RYE+++++RY C++G QR+LP IRC NGRW P+I+C+
Sbjct: 569 KMKPRYEINSLIRYHCKDGFIQRHLPTIRCLGNGRWAIPKITCM 612
>gi|30102948 hyaluronan and proteoglycan link protein 3 [Homo
sapiens]
Length = 360
Score = 233 bits (593), Expect = 8e-61
Identities = 141/310 (45%), Positives = 181/310 (58%), Gaps = 19/310 (6%)
Query: 50 GGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRGR--EAEVLVARGVRVKVNEAYRFR 107
G ++ +PC Y S R V RVKW LS E +VLVA G+R + Y+ R
Sbjct: 63 GASVILPCRYRYEPALVSPRRV----RVKWWKLSENGAPEKDVLVAIGLRHRSFGDYQGR 118
Query: 108 VALPAYPASLTDVSLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSAR 167
V L DVSL + +LR D G YRCEV G++D S VE++++GVVF Y+ + R
Sbjct: 119 VHLRQDKEH--DVSLEIQDLRLEDYGRYRCEVIDGLEDESGLVELELRGVVFPYQSPNGR 176
Query: 168 YAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGD 227
Y F+F Q+ CA A +A+ EQL+ A+ G + C+AGWL D TV+YPI PR+ C G
Sbjct: 177 YQFNFHEGQQVCAEQAAVVASFEQLFRAWEEGLDWCNAGWLQDATVQYPIMLPRQPC-GG 235
Query: 228 MDGFPGVRNYGVVDPD-DLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIAT 286
PGVR+YG YDV+C+A L G ++ + PEKLTL EAR CQE A IA
Sbjct: 236 PGLAPGVRSYGPRHRRLHRYDVFCFATALKGRVYYLEHPEKLTLTEAREACQEDDATIAK 295
Query: 287 TGQLYAAWD-GGLDHCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKH 345
GQL+AAW GLD C GWLADGSVRYP+V P CG PGV++ GFP+
Sbjct: 296 VGQLFAAWKFHGLDRCDAGWLADGSVRYPVVHPHPNCGPPEPGVRSF-------GFPDPQ 348
Query: 346 SR-FNVYCFR 354
SR + VYC+R
Sbjct: 349 SRLYGVYCYR 358
>gi|4503053 hyaluronan and proteoglycan link protein 1 [Homo
sapiens]
Length = 354
Score = 224 bits (572), Expect = 2e-58
Identities = 132/310 (42%), Positives = 178/310 (57%), Gaps = 17/310 (5%)
Query: 50 GGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRG--REAEVLVARGVRVKVNEAYRFR 107
GG +T+PC + R P + + + R+KWT L+ +E +V V+ G K Y+ R
Sbjct: 54 GGNVTLPCK--FYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQGR 111
Query: 108 VALPAYPASLTDVSLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSAR 167
V L S +D SL +++L D G Y+CEV G++D + V + ++GVVF Y R
Sbjct: 112 VFLKG--GSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGR 169
Query: 168 YAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGD 227
Y +F AQ+AC A IA+ +QLY A+ GG + C+AGWLSD +V+YPI PRE C G
Sbjct: 170 YNLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPC-GG 228
Query: 228 MDGFPGVRNYGVVDPD-DLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIAT 286
+ PGVRNYG D D YDV+C+ + NG + P KLT +EA C GA+IA
Sbjct: 229 QNTVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAK 288
Query: 287 TGQLYAAWD-GGLDHCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPN-K 344
GQ++AAW G D C GWLADGSVRYPI P +RC V+ + GFP+ K
Sbjct: 289 VGQIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFV-------GFPDKK 341
Query: 345 HSRFNVYCFR 354
H + VYCFR
Sbjct: 342 HKLYGVYCFR 351
>gi|30794472 hyaluronan and proteoglycan link protein 4 [Homo
sapiens]
Length = 402
Score = 209 bits (532), Expect = 9e-54
Identities = 138/374 (36%), Positives = 187/374 (50%), Gaps = 41/374 (10%)
Query: 12 LVLAQAPAA-------LADVLEGDSSEDRAFRVRIAGDAPLQGVL--GGALTIPCHVHYL 62
++L APA + VLEG+S + AP Q V GG + +PC HY
Sbjct: 20 VLLLTAPAGAQRGRKKVVHVLEGESGSV------VVQTAPGQVVSHRGGTIVLPCRYHYE 73
Query: 63 RPPPSRRAVLGSPRVKWT-FLSRGREAEVLVARGVRVKVNEAYRFRVALPAYPASLTDVS 121
V R+KWT + +V VA G + + +YR R L D S
Sbjct: 74 AAAHGHDGV----RLKWTKVVDPLAFTDVFVALGPQHRAFGSYRGRAELQGDGPG--DAS 127
Query: 122 LALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFSGAQEACAR 181
L L + D G Y CEV + ++D + V++ ++GVVF Y RY +F+ AQ ACA
Sbjct: 128 LVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYHPRGGRYKLTFAEAQRACAE 187
Query: 182 IGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREAC---------YGDMDGFP 232
+A+ EQL+AA+ G + C+AGWL D +V+YP+ PRE C G D
Sbjct: 188 QDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPREPCGGLGGTGSAGGGGDANG 247
Query: 233 GVRNYGV-VDPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIATTGQLY 291
G+RNYG + ++ YD +C+ +L G +F P + A C RGA +A GQL+
Sbjct: 248 GLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSGAARACAARGAAVAKVGQLF 307
Query: 292 AAWD-GGLDHCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSR-FN 349
AAW LD C+ GWLADGS RYPIV P RCGG PGV++L GFP+ R F
Sbjct: 308 AAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPGVRSL-------GFPDATRRLFG 360
Query: 350 VYCFRDSAQPSAIP 363
VYC+R P P
Sbjct: 361 VYCYRAPGAPDPAP 374
>gi|11141887 brain link protein-1 [Homo sapiens]
Length = 340
Score = 204 bits (518), Expect = 4e-52
Identities = 123/313 (39%), Positives = 173/313 (55%), Gaps = 28/313 (8%)
Query: 50 GGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRG--REAEVLVARGVRVKVNEAYRFR 107
G T+PC V PP S +V+W+ + G RE +L+ G+ + R
Sbjct: 50 GATATLPC-VLGTTPP--------SYKVRWSKVEPGELRETLILITNGLHARGYGPLGGR 100
Query: 108 VALPAYPASLTDVSLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSAR 167
+ D SL ++ +R D G YRCE+ +GI+D S A+ + ++GVVF Y+ R
Sbjct: 101 ARMRR--GHRLDASLVIAGVRLEDEGRYRCELINGIEDESVALTLSLEGVVFPYQPSRGR 158
Query: 168 YAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGD 227
Y F++ A++AC +AT QLY A+ G + C+AGWL + +VRYP+ T R C G
Sbjct: 159 YQFNYYEAKQACEEQDGRLATYSQLYQAWTEGLDWCNAGWLLEGSVRYPVLTARAPCGG- 217
Query: 228 MDGFPGVRNYGVVD-PDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAYCQERGAEIAT 286
G PG+R+YG D D YD +C+ L G++F P +LTL EA A C+ RGA +A
Sbjct: 218 -RGRPGIRSYGPRDRMRDRYDAFCFTSALAGQVFF--VPGRLTLSEAHAACRRRGAVVAK 274
Query: 287 TGQLYAAWD-GGLDHCSPGWLADGSVRYPIVTPSQRCGG-GLPGVKTLFLFPNQTGFPN- 343
G LYAAW GLD C GWLADGSVR+PI TP RCGG PGV++ GFP
Sbjct: 275 VGHLYAAWKFSGLDQCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSF-------GFPRP 327
Query: 344 KHSRFNVYCFRDS 356
+ + + YC+ ++
Sbjct: 328 QQAAYGTYCYAEN 340
>gi|110624774 mannose receptor, C type 2 [Homo sapiens]
Length = 1479
Score = 107 bits (267), Expect = 5e-23
Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Query: 688 CNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRYR---EYQW 744
C P W FQG CY+ + +RSW+E++ C G L SI + E +FI + + E W
Sbjct: 382 CEPSWQPFQGHCYRLQAEKRSWQESKKACLRGGGDLVSIHSMAELEFITKQIKQEVEELW 441
Query: 745 IGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHL 804
IGLND ++ +F WSDG + + +W+P +P+++ S E+CV +W +G+W+D PCN L
Sbjct: 442 IGLNDLKLQMNFEWSDGSLVSFTHWHPFEPNNFRDSLEDCVT-IWGPEGRWNDSPCNQSL 500
Query: 805 SYTC-KMGLVSCGPPPE 820
C K G +S G E
Sbjct: 501 PSICKKAGQLSQGAAEE 517
Score = 96.3 bits (238), Expect = 1e-19
Identities = 61/164 (37%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 657 NGGTCLEEEEG-VRCLCLPGYGGD----LCDVGLRFCNPGWDAFQ--GACYK-HFSTRRS 708
+G T E+G + C YG D C + C WD Q +CY+ +F + S
Sbjct: 199 HGCTSTGREDGHLWCATTQDYGKDERWGFCPIKSNDCETFWDKDQLTDSCYQFNFQSTLS 258
Query: 709 WEEAETQCRMYGAHLASISTPEEQDFINNRYREYQ---WIGLNDRTIEGDFLWSDGVPLL 765
W EA C GA L SI+ EQ +IN Y WIGLND G + WSD PL
Sbjct: 259 WREAWASCEQQGADLLSITEIHEQTYINGLLTGYSSTLWIGLNDLDTSGGWQWSDNSPLK 318
Query: 766 YENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCK 809
Y NW QPD+ S ENC V+ G W + C+ L Y CK
Sbjct: 319 YLNWESDQPDN--PSEENCGVIRTESSGGWQNRDCSIALPYVCK 360
Score = 76.6 bits (187), Expect = 1e-13
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 692 WDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRYREYQ-------W 744
W FQ A YK F +W +A+ C + A L S+ + E DF+++ +++ W
Sbjct: 829 WLRFQEAEYKFFEHHSTWAQAQRICTWFQAELTSVHSQAELDFLSHNLQKFSRAQEQHWW 888
Query: 745 IGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHL 804
IGL+ +G F W+DG + + +W PG+P + CV M + W D C L
Sbjct: 889 IGLHTSESDGRFRWTDGSIINFISWAPGKPRPVG-KDKKCVYMT-ASREDWGDQRCLTAL 946
Query: 805 SYTCKMGLVSC-GPPPELPLAQVFGRP 830
Y CK V+ PP+LP + G P
Sbjct: 947 PYICKRSNVTKETQPPDLPTTALGGCP 973
Score = 66.6 bits (161), Expect = 1e-10
Identities = 56/196 (28%), Positives = 79/196 (40%), Gaps = 24/196 (12%)
Query: 688 CNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFIN----NRYREYQ 743
C GW +CY + ++ EA C +G+ L +I+ EQ F++ N EY
Sbjct: 521 CRKGWTWHSPSCYWLGEDQVTYSEARRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYF 580
Query: 744 WIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHD-QGQWSDVPC-N 801
W L D G F W G ++Y +WN QP S CV + G W C +
Sbjct: 581 WTALQDLNSTGSFFWLSGDEVMYTHWNRDQPG---YSRGGCVALATGSAMGLWEVKNCTS 637
Query: 802 YHLSYTCKMGLVSCGPP--PEL----PLAQVFGRPRLRYEVDTVLRYRCREGLAQRNLPL 855
+ Y C+ L G P PEL P + G + DT LRY C + +
Sbjct: 638 FRARYICRQSL---GTPVTPELPGPDPTPSLTGSCPQGWASDTKLRY-CYKVFSSE---- 689
Query: 856 IRCQENGRWEAPQISC 871
R Q+ W Q +C
Sbjct: 690 -RLQDKKSWVQAQGAC 704
Score = 64.3 bits (155), Expect = 5e-10
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Query: 688 CNPGW--DAFQGACYKHFSTRR-----SWEEAETQCRMYGAHLASISTPEEQDFINN--- 737
C GW D CYK FS+ R SW +A+ C+ GA L S+++ EE+ F+ N
Sbjct: 669 CPQGWASDTKLRYCYKVFSSERLQDKKSWVQAQGACQELGAQLLSLASYEEEHFVANMLN 728
Query: 738 ----------RYREYQWIGLNDRTIEG--DFLWSDGVPLLYENWNPGQPDSYFLSGENCV 785
+ + WIGLN R G + WSDGV Y N++ + D + G C
Sbjct: 729 KIFGESEPEIHEQHWFWIGLNRRDPRGGQSWRWSDGVGFSYHNFDRSRHDDDDIRG--CA 786
Query: 786 VMVWHDQGQWSDVPCNYHLSYTCKM 810
V+ QW + C+ L + CK+
Sbjct: 787 VLDLASL-QWVAMQCDTQLDWICKI 810
Score = 64.3 bits (155), Expect = 5e-10
Identities = 50/159 (31%), Positives = 67/159 (42%), Gaps = 20/159 (12%)
Query: 679 DLCDVGLRFCNPGWDAFQGACYK----HFSTRRSWEEAETQCRMYGAHLASISTPEEQDF 734
DL L C W F C++ +R W EA+ C A L +I+ P EQ F
Sbjct: 963 DLPTTALGGCPSDWIQFLNKCFQVQGQEPQSRVKWSEAQFSCEQQEAQLVTITNPLEQAF 1022
Query: 735 INNRYREYQ---WIGLNDRTIEGDFLWSDGVPLLYENWNPGQPD--SYFLSGE---NCVV 786
I WIGL+ + DF W + PL+Y NW PG+P S SG +C V
Sbjct: 1023 ITASLPNVTFDLWIGLH--ASQRDFQWVEQEPLMYANWAPGEPSGPSPAPSGNKPTSCAV 1080
Query: 787 MVW----HDQGQWSDVPCNYHL-SYTCKMGL-VSCGPPP 819
++ H G+W D C + C+ G S P P
Sbjct: 1081 VLHSPSAHFTGRWDDRSCTEETHGFICQKGTDPSLSPSP 1119
Score = 53.5 bits (127), Expect = 9e-07
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 11/138 (7%)
Query: 681 CDVGLRFCNPGWDAFQGACYK-HFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRY 739
C GL + W F+ CY H +EA +C+ G + SI E F+
Sbjct: 1261 CPQGL--ADSAWIPFREHCYSFHMELLLGHKEARQRCQRAGGAVLSILDEMENVFVWEHL 1318
Query: 740 REYQ------WIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQG 793
+ Y+ W+G+N G +W D + Y NW P LS +C + + G
Sbjct: 1319 QSYEGQSRGAWLGMNFNPKGGTLVWQDNTAVNYSNWGPPGLGPSMLSHNSC-YWIQSNSG 1377
Query: 794 QWSDVPC-NYHLSYTCKM 810
W C N + CK+
Sbjct: 1378 LWRPGACTNITMGVVCKL 1395
Score = 42.0 bits (97), Expect = 0.003
Identities = 35/115 (30%), Positives = 42/115 (36%), Gaps = 13/115 (11%)
Query: 709 WEEAETQCRMYGAHLASISTPEEQDFINNRYREYQ---WIGLNDRTIEGDFLWSDGVPLL 765
W +A C A LA + P Q F+ R + WIGL + W PL
Sbjct: 1146 WHDALLLCESRNASLAYVPDPYTQAFLTQAARGLRTPLWIGLAGEEGSRRYSWVSEEPLN 1205
Query: 766 YENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHL-SYTCKMGLVSCGPPP 819
Y W G+P G V V G W C+ L C VS GPPP
Sbjct: 1206 YVGWQDGEPQQ---PGGCTYVDV---DGAWRTTSCDTKLQGAVCG---VSSGPPP 1251
>gi|57546917 mannose receptor, C type 1-like 1 [Homo sapiens]
Length = 1456
Score = 95.1 bits (235), Expect = 3e-19
Identities = 56/135 (41%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 688 CNPGWDAFQGACYK-HFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRY----REY 742
C W + G CYK H ++ +A T CR G+ LASI T EE DFI ++ +
Sbjct: 362 CPSQWWPYAGHCYKIHRDEKKIQRDALTTCRKEGSDLASIHTIEEFDFIISQLGYEPNDE 421
Query: 743 QWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNY 802
WIGLND I+ F WSDG P+ + W G+P E+CVVM D G W+D C +
Sbjct: 422 LWIGLNDIKIQMYFEWSDGTPVTFTKWLRGEPSHENNRQEDCVVMKGKD-GYWADRGCEW 480
Query: 803 HLSYTCKMGLVSCGP 817
L Y CKM S GP
Sbjct: 481 PLGYICKMKSRSQGP 495
Score = 83.2 bits (204), Expect = 1e-15
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 688 CNPGWDAFQGACYKHFS----TRRSWEEAETQCRMYGAHLASISTPEEQDFINNRYREYQ 743
C GW+ + C+K F R++W+EA C +G +L SI +EQ F+ ++
Sbjct: 945 CKEGWNFYSNKCFKIFGFMEEERKNWQEARKACIGFGGNLVSIQNEKEQAFLTYHMKDST 1004
Query: 744 ---WIGLNDRTIEGDFLWSDGVPLLYENWNPGQP----DSYFLSGENCVVMVW---HDQG 793
W GLND E FLW+DG + Y NW G P S +CVV++ ++ G
Sbjct: 1005 FSAWTGLNDVNSEHTFLWTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAG 1064
Query: 794 QWSDVPCNYHLSYTCK 809
+W D C+ Y C+
Sbjct: 1065 KWMDDTCDSKRGYICQ 1080
Score = 74.7 bits (182), Expect = 4e-13
Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 692 WDAFQGACYK-HFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRYREYQ-----WI 745
W F G CY S R+W +A +C G+ L SI + E F++ R + WI
Sbjct: 1238 WIPFHGHCYYIESSYTRNWGQASLECLRMGSSLVSIESAAESSFLSYRVEPLKSKTNFWI 1297
Query: 746 GLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGE-NCVVMVWHDQGQWSDVPCNYHL 804
GL R +EG +LW + P+ + NWN G P SGE N V + G WS++ C+ +
Sbjct: 1298 GLF-RNVEGTWLWINNSPVSFVNWNTGDP-----SGERNDCVALHASSGFWSNIHCSSYK 1351
Query: 805 SYTCKM-GLVSCGPPPEL 821
Y CK ++ P EL
Sbjct: 1352 GYICKRPKIIDAKPTHEL 1369
Score = 72.8 bits (177), Expect = 1e-12
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 688 CNPGWDAFQ--GACYKHFST----RRSWEEAETQCRMYGAHLASISTPEEQDFI------ 735
C W A C+K ++ +++W E+ CR G LASI+ EEQ I
Sbjct: 646 CPEDWGASSRTSLCFKLYAKGKHEKKTWFESRDFCRALGGDLASINNKEEQQTIWRLITA 705
Query: 736 NNRYREYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQW 795
+ Y + W+GL + F WSDG P+ YENW G+P++Y + E C + W
Sbjct: 706 SGSYHKLFWLGLTYGSPSEGFTWSDGSPVSYENWAYGEPNNY-QNVEYCGELKGDPTMSW 764
Query: 796 SDVPCNYHLSYTCKMGLVSCGPPPELPLAQ 825
+D+ C + ++ C++ P P Q
Sbjct: 765 NDINCEHLNNWICQIQKGQTPKPEPTPAPQ 794
Score = 66.6 bits (161), Expect = 1e-10
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 708 SWEEAETQCRMYGAHLASISTPEEQDFINNRYREYQ---WIGLNDRTIEGDFLWSDGVPL 764
+W +A C+ A L SI+ EQ ++ WIGLN + + WSD P
Sbjct: 239 TWHQARKSCQQQNAELLSITEIHEQTYLTGLTSSLTSGLWIGLNSLSFNSGWQWSDRSPF 298
Query: 765 LYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCKMG 811
Y NW PG P + G++CV + +W ++ C L Y CK G
Sbjct: 299 RYLNWLPGSPSAE--PGKSCVSLNPGKNAKWENLECVQKLGYICKKG 343
Score = 56.2 bits (134), Expect = 1e-07
Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Query: 688 CNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINN----RYREYQ 743
C GW CY T ++ EA C A+L +I EQ F+ + R +Y
Sbjct: 504 CRKGWKKHHFYCYMIGHTLSTFAEANQTCNNENAYLTTIEDRYEQAFLTSFVGLRPEKYF 563
Query: 744 WIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVM-VWHDQGQWSDVPCNY 802
W GL+D +G F W+ + + +WN P CV M G W + C+
Sbjct: 564 WTGLSDIQTKGTFQWTIEEEVRFTHWNSDMPG----RKPGCVAMRTGIAGGLWDVLKCDE 619
Query: 803 HLSYTCKMGLVSCGPPPE 820
+ CK PP+
Sbjct: 620 KAKFVCKHWAEGVTHPPK 637
Score = 56.2 bits (134), Expect = 1e-07
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 691 GWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRYREYQWIGL 747
G+ + + Y + W EAET C+++ + +ASI P F E WI L
Sbjct: 1098 GFVKYGKSSYSLMRQKFQWHEAETYCKLHNSLIASILDPYSNAFAWLQMETSNERVWIAL 1157
Query: 748 NDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYT 807
N + + W+D + Y NW +P CV + G W CN +
Sbjct: 1158 NSNLTDNQYTWTDKWRVRYTNWAADEPK----LKSACVYL--DLDGYWKTAHCNESFYFL 1211
Query: 808 CKMG-LVSCGPPPELP 822
CK + PP+LP
Sbjct: 1212 CKRSDEIPATEPPQLP 1227
Score = 54.7 bits (130), Expect = 4e-07
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 691 GWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI-----NNRYREYQWI 745
GW ++ Y + + + A C+ L SI + E+ F+ N + +I
Sbjct: 803 GWVIYKDYQYYFSKEKETMDNARAFCKRNFGDLVSIQSESEKKFLWKYVNRNDAQSAYFI 862
Query: 746 GLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLS 805
GL +++ F W DG + Y +W G+P+ + ENCV M + + G W+D+ C Y +
Sbjct: 863 GLLI-SLDKKFAWMDGSKVDYVSWATGEPN-FANEDENCVTM-YSNSGFWNDINCGYPNA 919
Query: 806 YTCK 809
+ C+
Sbjct: 920 FICQ 923
>gi|31542313 C-type lectin domain family 4, member D [Homo sapiens]
Length = 215
Score = 93.6 bits (231), Expect = 8e-19
Identities = 51/129 (39%), Positives = 72/129 (55%), Gaps = 9/129 (6%)
Query: 688 CNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRYREYQW 744
C W AFQ CY + ++W E+E C GAHL +IST EQ+FI +R Y +
Sbjct: 84 CPIDWRAFQSNCYFPLTDNKTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDRRLSY-F 142
Query: 745 IGLNDRTIEGDFLWSDGVPLLYEN--WNPGQPDSYFLSGENCVVMVWH-DQGQWSDVPCN 801
+GL D +G + W D P W+ +PD+ GENCVV+V++ D+ W+DVPCN
Sbjct: 143 LGLRDENAKGQWRWVDQTPFNPRRVFWHKNEPDN--SQGENCVVLVYNQDKWAWNDVPCN 200
Query: 802 YHLSYTCKM 810
+ S CK+
Sbjct: 201 FEASRICKI 209
>gi|4505245 mannose receptor C type 1 precursor [Homo sapiens]
Length = 1456
Score = 93.6 bits (231), Expect = 8e-19
Identities = 55/135 (40%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 688 CNPGWDAFQGACYK-HFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRY----REY 742
C W + G CYK H ++ +A T CR G L SI T EE DFI ++ +
Sbjct: 362 CPSQWWPYAGHCYKIHRDEKKIQRDALTTCRKEGGDLTSIHTIEELDFIISQLGYEPNDE 421
Query: 743 QWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNY 802
WIGLND I+ F WSDG P+ + W G+P E+CVVM D G W+D C +
Sbjct: 422 LWIGLNDIKIQMYFEWSDGTPVTFTKWLRGEPSHENNRQEDCVVMKGKD-GYWADRGCEW 480
Query: 803 HLSYTCKMGLVSCGP 817
L Y CKM S GP
Sbjct: 481 PLGYICKMKSRSQGP 495
Score = 83.2 bits (204), Expect = 1e-15
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 688 CNPGWDAFQGACYKHFS----TRRSWEEAETQCRMYGAHLASISTPEEQDFINNRYREYQ 743
C GW+ + C+K F R++W+EA C +G +L SI +EQ F+ ++
Sbjct: 945 CKEGWNFYSNKCFKIFGFMEEERKNWQEARKACIGFGGNLVSIQNEKEQAFLTYHMKDST 1004
Query: 744 ---WIGLNDRTIEGDFLWSDGVPLLYENWNPGQP----DSYFLSGENCVVMVW---HDQG 793
W GLND E FLW+DG + Y NW G P S +CVV++ ++ G
Sbjct: 1005 FSAWTGLNDVNSEHTFLWTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAG 1064
Query: 794 QWSDVPCNYHLSYTCK 809
+W D C+ Y C+
Sbjct: 1065 KWMDDTCDSKRGYICQ 1080
Score = 74.7 bits (182), Expect = 4e-13
Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 692 WDAFQGACYK-HFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRYREYQ-----WI 745
W F G CY S R+W +A +C G+ L SI + E F++ R + WI
Sbjct: 1238 WIPFHGHCYYIESSYTRNWGQASLECLRMGSSLVSIESAAESSFLSYRVEPLKSKTNFWI 1297
Query: 746 GLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGE-NCVVMVWHDQGQWSDVPCNYHL 804
GL R +EG +LW + P+ + NWN G P SGE N V + G WS++ C+ +
Sbjct: 1298 GLF-RNVEGTWLWINNSPVSFVNWNTGDP-----SGERNDCVALHASSGFWSNIHCSSYK 1351
Query: 805 SYTCKM-GLVSCGPPPEL 821
Y CK ++ P EL
Sbjct: 1352 GYICKRPKIIDAKPTHEL 1369
Score = 72.8 bits (177), Expect = 1e-12
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 688 CNPGWDAFQ--GACYKHFST----RRSWEEAETQCRMYGAHLASISTPEEQDFI------ 735
C W A C+K ++ +++W E+ CR G LASI+ EEQ I
Sbjct: 646 CPEDWGASSRTSLCFKLYAKGKHEKKTWFESRDFCRALGGDLASINNKEEQQTIWRLITA 705
Query: 736 NNRYREYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQW 795
+ Y + W+GL + F WSDG P+ YENW G+P++Y + E C + W
Sbjct: 706 SGSYHKLFWLGLTYGSPSEGFTWSDGSPVSYENWAYGEPNNY-QNVEYCGELKGDPTMSW 764
Query: 796 SDVPCNYHLSYTCKMGLVSCGPPPELPLAQ 825
+D+ C + ++ C++ P P Q
Sbjct: 765 NDINCEHLNNWICQIQKGQTPKPEPTPAPQ 794
Score = 66.6 bits (161), Expect = 1e-10
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 708 SWEEAETQCRMYGAHLASISTPEEQDFINNRYREYQ---WIGLNDRTIEGDFLWSDGVPL 764
+W +A C+ A L SI+ EQ ++ WIGLN + + WSD P
Sbjct: 239 TWHQARKSCQQQNAELLSITEIHEQTYLTGLTSSLTSGLWIGLNSLSFNSGWQWSDRSPF 298
Query: 765 LYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYTCKMG 811
Y NW PG P + G++CV + +W ++ C L Y CK G
Sbjct: 299 RYLNWLPGSPSAE--PGKSCVSLNPGKNAKWENLECVQKLGYICKKG 343
Score = 56.2 bits (134), Expect = 1e-07
Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Query: 688 CNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINN----RYREYQ 743
C GW CY T ++ EA C A+L +I EQ F+ + R +Y
Sbjct: 504 CRKGWKKHHFYCYMIGHTLSTFAEANQTCNNENAYLTTIEDRYEQAFLTSFVGLRPEKYF 563
Query: 744 WIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVM-VWHDQGQWSDVPCNY 802
W GL+D +G F W+ + + +WN P CV M G W + C+
Sbjct: 564 WTGLSDIQTKGTFQWTIEEEVRFTHWNSDMPG----RKPGCVAMRTGIAGGLWDVLKCDE 619
Query: 803 HLSYTCKMGLVSCGPPPE 820
+ CK PP+
Sbjct: 620 KAKFVCKHWAEGVTHPPK 637
Score = 56.2 bits (134), Expect = 1e-07
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 691 GWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRYREYQWIGL 747
G+ + + Y + W EAET C+++ + +ASI P F E WI L
Sbjct: 1098 GFVKYGKSSYSLMRQKFQWHEAETYCKLHNSLIASILDPYSNAFAWLQMETSNERVWIAL 1157
Query: 748 NDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSYT 807
N + + W+D + Y NW +P CV + G W CN +
Sbjct: 1158 NSNLTDNQYTWTDKWRVRYTNWAADEPK----LKSACVYL--DLDGYWKTAHCNESFYFL 1211
Query: 808 CKMG-LVSCGPPPELP 822
CK + PP+LP
Sbjct: 1212 CKRSDEIPATEPPQLP 1227
Score = 54.7 bits (130), Expect = 4e-07
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 691 GWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI-----NNRYREYQWI 745
GW ++ Y + + + A C+ L SI + E+ F+ N + +I
Sbjct: 803 GWVIYKDYQYYFSKEKETMDNARAFCKRNFGDLVSIQSESEKKFLWKYVNRNDAQSAYFI 862
Query: 746 GLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLS 805
GL +++ F W DG + Y +W G+P+ + ENCV M + + G W+D+ C Y +
Sbjct: 863 GLLI-SLDKKFAWMDGSKVDYVSWATGEPN-FANEDENCVTM-YSNSGFWNDINCGYPNA 919
Query: 806 YTCK 809
+ C+
Sbjct: 920 FICQ 923
>gi|18641360 collectin sub-family member 12 [Homo sapiens]
Length = 742
Score = 90.1 bits (222), Expect = 8e-18
Identities = 72/247 (29%), Positives = 103/247 (41%), Gaps = 34/247 (13%)
Query: 570 GGPELSGVPRGESEETGSSEGAPSL--LPATRAPEGTRELEAPSEDNSGRTAPAGTSVQA 627
G P G P+G S + G G P LP + P G + L+ + G P G +
Sbjct: 512 GSPGKPG-PQGPSGDPGPP-GPPGKEGLPGPQGPPGFQGLQG-TVGEPGVPGPRG--LPG 566
Query: 628 QPVLPTDSASRGGVAVVPASGDCVPSPCHNGGTCLEEEEGVRCLCLPGYGGDLCDVGLRF 687
P +P +G SG VP N T E+ G
Sbjct: 567 LPGVPGMPGPKGPPGPPGPSGAVVPLALQNEPTPAPEDNG-------------------- 606
Query: 688 CNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRY--REYQWI 745
C P W F CY + +E+A+ C +HL I+T EEQ +I + RE WI
Sbjct: 607 CPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINTREEQQWIKKQMVGRESHWI 666
Query: 746 GLNDRTIEGDFLWSDGVPLLYENWNPGQPDSY---FLSGENCVVMVWHDQGQWSDVPCNY 802
GL D E ++ W DG Y+NW GQPD++ GE+C +++ GQW+D C
Sbjct: 667 GLTDSERENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGLIY--AGQWNDFQCED 724
Query: 803 HLSYTCK 809
++ C+
Sbjct: 725 VNNFICE 731
>gi|20149533 Fc fragment of IgE, low affinity II, receptor for
(CD23A) [Homo sapiens]
Length = 321
Score = 89.4 bits (220), Expect = 1e-17
Identities = 50/142 (35%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 688 CNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRYREY-QWIG 746
C W FQ CY + W A C L SI +PEEQDF+ WIG
Sbjct: 163 CPEKWINFQRKCYYFGKGTKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIG 222
Query: 747 LNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVPCNYHLSY 806
L + ++G+F+W DG + Y NW PG+P S GE+CV+M G+W+D C+ L
Sbjct: 223 LRNLDLKGEFIWVDGSHVDYSNWAPGEPTSR-SQGEDCVMM--RGSGRWNDAFCDRKLGA 279
Query: 807 TCKMGLVSCGPPPELPLAQVFG 828
L +C PP A+ G
Sbjct: 280 WVCDRLATCTPPASEGSAESMG 301
>gi|223029517 CD209 molecule isoform 8 [Homo sapiens]
Length = 243
Score = 87.8 bits (216), Expect = 4e-17
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 14/144 (9%)
Query: 686 RFCNP---GWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRY 739
R C+P W FQG CY +++R+W ++ T C+ GA L I + EEQ+F+ ++R
Sbjct: 90 RLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRS 149
Query: 740 REYQWIGLNDRTIEGDFLWSDGVPLL---YENWNPGQPDSYFLSGENCVVMVWHDQGQWS 796
+ W+GL+D EG + W DG PLL + WN G+P++ + E+C W+
Sbjct: 150 NRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNN--VGEEDCAEF---SGNGWN 204
Query: 797 DVPCNYHLSYTCKMGLVSCGPPPE 820
D CN + CK SC E
Sbjct: 205 DDKCNLAKFWICKKSAASCSRDEE 228
>gi|223029386 CD209 molecule isoform 3 [Homo sapiens]
Length = 380
Score = 87.8 bits (216), Expect = 4e-17
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 14/144 (9%)
Query: 686 RFCNP---GWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRY 739
R C+P W FQG CY +++R+W ++ T C+ GA L I + EEQ+F+ ++R
Sbjct: 227 RLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRS 286
Query: 740 REYQWIGLNDRTIEGDFLWSDGVPLL---YENWNPGQPDSYFLSGENCVVMVWHDQGQWS 796
+ W+GL+D EG + W DG PLL + WN G+P++ + E+C W+
Sbjct: 287 NRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNN--VGEEDCAEF---SGNGWN 341
Query: 797 DVPCNYHLSYTCKMGLVSCGPPPE 820
D CN + CK SC E
Sbjct: 342 DDKCNLAKFWICKKSAASCSRDEE 365
>gi|223029384 CD209 molecule isoform 7 [Homo sapiens]
Length = 312
Score = 87.8 bits (216), Expect = 4e-17
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 14/144 (9%)
Query: 686 RFCNP---GWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRY 739
R C+P W FQG CY +++R+W ++ T C+ GA L I + EEQ+F+ ++R
Sbjct: 159 RLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRS 218
Query: 740 REYQWIGLNDRTIEGDFLWSDGVPLL---YENWNPGQPDSYFLSGENCVVMVWHDQGQWS 796
+ W+GL+D EG + W DG PLL + WN G+P++ + E+C W+
Sbjct: 219 NRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNN--VGEEDCAEF---SGNGWN 273
Query: 797 DVPCNYHLSYTCKMGLVSCGPPPE 820
D CN + CK SC E
Sbjct: 274 DDKCNLAKFWICKKSAASCSRDEE 297
>gi|223029382 CD209 molecule isoform 6 [Homo sapiens]
Length = 360
Score = 87.8 bits (216), Expect = 4e-17
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 14/144 (9%)
Query: 686 RFCNP---GWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRY 739
R C+P W FQG CY +++R+W ++ T C+ GA L I + EEQ+F+ ++R
Sbjct: 207 RLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRS 266
Query: 740 REYQWIGLNDRTIEGDFLWSDGVPLL---YENWNPGQPDSYFLSGENCVVMVWHDQGQWS 796
+ W+GL+D EG + W DG PLL + WN G+P++ + E+C W+
Sbjct: 267 NRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNN--VGEEDCAEF---SGNGWN 321
Query: 797 DVPCNYHLSYTCKMGLVSCGPPPE 820
D CN + CK SC E
Sbjct: 322 DDKCNLAKFWICKKSAASCSRDEE 345
>gi|223029380 CD209 molecule isoform 5 [Homo sapiens]
Length = 268
Score = 87.8 bits (216), Expect = 4e-17
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 14/144 (9%)
Query: 686 RFCNP---GWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRY 739
R C+P W FQG CY +++R+W ++ T C+ GA L I + EEQ+F+ ++R
Sbjct: 115 RLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRS 174
Query: 740 REYQWIGLNDRTIEGDFLWSDGVPLL---YENWNPGQPDSYFLSGENCVVMVWHDQGQWS 796
+ W+GL+D EG + W DG PLL + WN G+P++ + E+C W+
Sbjct: 175 NRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNN--VGEEDCAEF---SGNGWN 229
Query: 797 DVPCNYHLSYTCKMGLVSCGPPPE 820
D CN + CK SC E
Sbjct: 230 DDKCNLAKFWICKKSAASCSRDEE 253
>gi|10863957 CD209 molecule isoform 1 [Homo sapiens]
Length = 404
Score = 87.8 bits (216), Expect = 4e-17
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 14/144 (9%)
Query: 686 RFCNP---GWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRY 739
R C+P W FQG CY +++R+W ++ T C+ GA L I + EEQ+F+ ++R
Sbjct: 251 RLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQNFLQLQSSRS 310
Query: 740 REYQWIGLNDRTIEGDFLWSDGVPLL---YENWNPGQPDSYFLSGENCVVMVWHDQGQWS 796
+ W+GL+D EG + W DG PLL + WN G+P++ + E+C W+
Sbjct: 311 NRFTWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNN--VGEEDCAEF---SGNGWN 365
Query: 797 DVPCNYHLSYTCKMGLVSCGPPPE 820
D CN + CK SC E
Sbjct: 366 DDKCNLAKFWICKKSAASCSRDEE 389
>gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo
sapiens]
Length = 316
Score = 85.9 bits (211), Expect = 2e-16
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 688 CNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRY-REYQWIG 746
C W Q +CY + SW EAE C++ AHL I++ EEQ+F+ Y W+G
Sbjct: 181 CPVNWVEHQDSCYWFSHSGMSWAEAEKYCQLKNAHLVVINSREEQNFVQKYLGSAYTWMG 240
Query: 747 LNDRTIEGDFLWSDGVPLL--YENWNPGQPDSY----FLSGENCVVMVWHDQGQWSDVPC 800
L+D EG + W DG ++NW PGQPD + GE+C +H G+W+D C
Sbjct: 241 LSDP--EGAWKWVDGTDYATGFQNWKPGQPDDWQGHGLGGGEDCA--HFHPDGRWNDDVC 296
Query: 801 NYHLSYTCKMGL 812
+ C+ GL
Sbjct: 297 QRPYHWVCEAGL 308
>gi|53832016 C-type lectin, superfamily member 14 isoform 2 [Homo
sapiens]
Length = 292
Score = 85.9 bits (211), Expect = 2e-16
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 688 CNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRY-REYQWIG 746
C W Q +CY + SW EAE C++ AHL I++ EEQ+F+ Y W+G
Sbjct: 157 CPVNWVEHQDSCYWFSHSGMSWAEAEKYCQLKNAHLVVINSREEQNFVQKYLGSAYTWMG 216
Query: 747 LNDRTIEGDFLWSDGVPLL--YENWNPGQPDSY----FLSGENCVVMVWHDQGQWSDVPC 800
L+D EG + W DG ++NW PGQPD + GE+C +H G+W+D C
Sbjct: 217 LSDP--EGAWKWVDGTDYATGFQNWKPGQPDDWQGHGLGGGEDCA--HFHPDGRWNDDVC 272
Query: 801 NYHLSYTCKMGL 812
+ C+ GL
Sbjct: 273 QRPYHWVCEAGL 284
>gi|223029388 CD209 molecule isoform 4 [Homo sapiens]
Length = 398
Score = 85.1 bits (209), Expect = 3e-16
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 686 RFCNP---GWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRYREY 742
R C+P W FQG CY +++R+W ++ T C+ GA L I + EEQ +NR +
Sbjct: 251 RLCHPCPWEWTFFQGNCYFMSNSQRNWHDSITACKEVGAQLVVIKSAEEQSSRSNR---F 307
Query: 743 QWIGLNDRTIEGDFLWSDGVPLL---YENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVP 799
W+GL+D EG + W DG PLL + WN G+P++ + E+C W+D
Sbjct: 308 TWMGLSDLNQEGTWQWVDGSPLLPSFKQYWNRGEPNN--VGEEDCAEF---SGNGWNDDK 362
Query: 800 CNYHLSYTCKMGLVSCGPPPE 820
CN + CK SC E
Sbjct: 363 CNLAKFWICKKSAASCSRDEE 383
>gi|223278347 C-type lectin domain family 4, member M isoform 9
[Homo sapiens]
Length = 353
Score = 78.6 bits (192), Expect = 3e-14
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 686 RFCNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRYREY 742
R C W FQG CY +++R+W ++ T C+ A L I T EEQ+F+ +R +
Sbjct: 220 RHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 279
Query: 743 QWIGLNDRTIEGDFLWSDGVPL---LYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVP 799
W+GL+D EG + W DG PL WN G+P++ E+C W+D
Sbjct: 280 SWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNN--SGNEDCAEF---SGSGWNDNR 334
Query: 800 CNYHLSYTCK 809
C+ + CK
Sbjct: 335 CDVDNYWICK 344
>gi|223278339 C-type lectin domain family 4, member M isoform 7
[Homo sapiens]
Length = 263
Score = 78.6 bits (192), Expect = 3e-14
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 686 RFCNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRYREY 742
R C W FQG CY +++R+W ++ T C+ A L I T EEQ+F+ +R +
Sbjct: 130 RHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 189
Query: 743 QWIGLNDRTIEGDFLWSDGVPL---LYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVP 799
W+GL+D EG + W DG PL WN G+P++ E+C W+D
Sbjct: 190 SWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNN--SGNEDCAEF---SGSGWNDNR 244
Query: 800 CNYHLSYTCK 809
C+ + CK
Sbjct: 245 CDVDNYWICK 254
>gi|223278337 C-type lectin domain family 4, member M isoform 12
[Homo sapiens]
Length = 375
Score = 78.6 bits (192), Expect = 3e-14
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 686 RFCNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRYREY 742
R C W FQG CY +++R+W ++ T C+ A L I T EEQ+F+ +R +
Sbjct: 242 RHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 301
Query: 743 QWIGLNDRTIEGDFLWSDGVPL---LYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVP 799
W+GL+D EG + W DG PL WN G+P++ E+C W+D
Sbjct: 302 SWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNN--SGNEDCAEF---SGSGWNDNR 356
Query: 800 CNYHLSYTCK 809
C+ + CK
Sbjct: 357 CDVDNYWICK 366
>gi|223278335 C-type lectin domain family 4, member M isoform 2
[Homo sapiens]
Length = 348
Score = 78.6 bits (192), Expect = 3e-14
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 686 RFCNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFI---NNRYREY 742
R C W FQG CY +++R+W ++ T C+ A L I T EEQ+F+ +R +
Sbjct: 215 RHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRF 274
Query: 743 QWIGLNDRTIEGDFLWSDGVPL---LYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDVP 799
W+GL+D EG + W DG PL WN G+P++ E+C W+D
Sbjct: 275 SWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNN--SGNEDCAEF---SGSGWNDNR 329
Query: 800 CNYHLSYTCK 809
C+ + CK
Sbjct: 330 CDVDNYWICK 339
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,743,108
Number of Sequences: 37866
Number of extensions: 2786845
Number of successful extensions: 38907
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 1267
Number of HSP's that attempted gapping in prelim test: 17612
Number of HSP's gapped (non-prelim): 11515
length of query: 911
length of database: 18,247,518
effective HSP length: 111
effective length of query: 800
effective length of database: 14,044,392
effective search space: 11235513600
effective search space used: 11235513600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.