Guide to the Human Genome
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Name: TRIM69 Sequence: fasta or formatted (341aa) NCBI GI: 37595541
Description:

tripartite motif-containing 69 isoform b

Referenced in:

Tripartite Motif Family

Other entries for this name:
alt prot [500aa] tripartite motif-containing 69 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         13           2
 C cysteine            1.5          5           1
 D aspartate           4.4         15           2
 E glutamate           8.5         29           3
 F phenylalanine       3.5         12           1
 G glycine             5.3         18           2
 H histidine           3.2         11           1
 I isoleucine          4.1         14           2
 K lysine              8.2         28           2
 L leucine            14.7         50           2
 M methionine          3.2         11           1
 N asparagine          4.1         14           2
 P proline             4.1         14           1
 Q glutamine           6.7         23           2
 R arginine            3.2         11           1
 S serine              6.2         21           2
 T threonine           6.7         23           2
 V valine              4.1         14           2
 W tryptophan          1.8          6           1
 Y tyrosine            2.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tripartite motif-containing 69 isoform b 
TRIM69                0.996   tripartite motif-containing 69 isoform a 
TRIM39                0.261   tripartite motif-containing 39 isoform 2 
TRIM62                0.243   tripartite motif-containing 62 
TRIM39                0.238   tripartite motif-containing 39 isoform 1 
TRIML1                0.228   tripartite motif family-like 1 
ERMAP                 0.219   erythroblast membrane-associated protein precursor [...
ERMAP                 0.219   erythroblast membrane-associated protein precursor [...
MEFV                  0.214   Mediterranean fever protein 
TRIM50                0.196   tripartite motif protein 50A 
TRIM7                 0.193   tripartite motif-containing 7 isoform 1 
TRIM27                0.192   ret finger protein 
TRIM7                 0.187   tripartite motif-containing 7 isoform 2 
TRIM7                 0.187   tripartite motif-containing 7 isoform 3 
TRIM7                 0.187   tripartite motif-containing 7 isoform 3 
TRIM7                 0.187   tripartite motif-containing 7 isoform 3 
TRIM68                0.175   ring finger protein 137 
BTN1A1                0.175   butyrophilin, subfamily 1, member A1 
BTN2A2                0.175   butyrophilin, subfamily 2, member A2 isoform b [Homo...
BTN2A2                0.175   butyrophilin, subfamily 2, member A2 isoform a 
TRIM21                0.174   tripartite motif protein 21 
TRIM60                0.172   ring finger protein 129 
TRIM58                0.172   tripartite motif-containing 58 
BTN3A1                0.169   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTN3A1                0.169   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN2A1                0.169   butyrophilin, subfamily 2, member A1 isoform 1 precur...
TRIM75                0.168   tripartite motif-containing 75 
BTN3A3                0.166   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A3                0.166   butyrophilin, subfamily 3, member A3 isoform b [Homo...
TRIM11                0.165   tripartite motif-containing 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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