Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NUDT9 Sequence: fasta or formatted (300aa) NCBI GI: 37594457
Description:

nudix-type motif 9 isoform b

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt prot [350aa] nudix-type motif 9 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         21           2
 C cysteine            0.7          2           1
 D aspartate           6.7         20           2
 E glutamate           9.0         27           2
 F phenylalanine       2.0          6           1
 G glycine             8.3         25           2
 H histidine           3.7         11           1
 I isoleucine          4.7         14           2
 K lysine              9.0         27           1
 L leucine             6.3         19           2
 M methionine          2.0          6           1
 N asparagine          5.7         17           1
 P proline             5.0         15           1
 Q glutamine           2.3          7           1
 R arginine            5.3         16           1
 S serine              7.7         23           2
 T threonine           3.0          9           1
 V valine              6.0         18           1
 W tryptophan          3.0          9           1
 Y tyrosine            2.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nudix-type motif 9 isoform b 
NUDT9                 1.000   nudix-type motif 9 isoform a 
TRPM2                 0.233   transient receptor potential cation channel, subfamil...
NUDT18                0.018   nudix (nucleoside diphosphate linked moiety X)-type...
MTUS1                 0.013   mitochondrial tumor suppressor 1 isoform 5 
MTUS1                 0.013   mitochondrial tumor suppressor 1 isoform 1 
MTUS1                 0.013   mitochondrial tumor suppressor 1 isoform 2 
MTUS1                 0.013   mitochondrial tumor suppressor 1 isoform 4 
ZNF397OS              0.013   zinc finger protein 397 opposite strand 
C20orf194             0.013   hypothetical protein LOC25943 
MYH6                  0.012   myosin heavy chain 6 
SNUPN                 0.010   snurportin 1 
SNUPN                 0.010   snurportin 1 
SNUPN                 0.010   snurportin 1 
MYH3                  0.010   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH1                  0.010   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH4                  0.010   myosin, heavy polypeptide 4, skeletal muscle 
C20orf117             0.010   hypothetical protein LOC140710 
LOC100291878          0.008   PREDICTED: similar to RIKEN cDNA C230030N03 
C3orf44               0.008   hypothetical protein LOC131831 
MYH8                  0.008   myosin, heavy chain 8, skeletal muscle, perinatal [...
RBBP5                 0.008   retinoblastoma binding protein 5 
MYH2                  0.008   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.008   myosin, heavy chain 2, skeletal muscle, adult [Homo...
HDX                   0.008   highly divergent homeobox 
DCTN1                 0.007   dynactin 1 isoform 4 
DCTN1                 0.007   dynactin 1 isoform 3 
DCTN1                 0.007   dynactin 1 isoform 2 
DCTN1                 0.007   dynactin 1 isoform 1 
MYH13                 0.007   myosin, heavy polypeptide 13, skeletal muscle [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press