RBBP5 32376

Name: RBBP5	Sequence: fasta or formatted (538aa)		NCBI GI: 53759148
Description: retinoblastoma binding protein 5		Referenced in: Histones, Related Proteins, and Modifying Enzymes RB1 and Related Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 36 2 C cysteine 2.2 12 2 D aspartate 8.0 43 3 E glutamate 7.8 42 2 F phenylalanine 2.8 15 1 G glycine 7.4 40 2 H histidine 1.7 9 1 I isoleucine 5.6 30 2 K lysine 7.2 39 3 L leucine 8.6 46 3 M methionine 1.1 6 1 N asparagine 3.3 18 1 P proline 6.1 33 3 Q glutamine 3.5 19 1 R arginine 4.3 23 2 S serine 8.6 46 2 T threonine 4.5 24 2 V valine 6.9 37 2 W tryptophan 1.7 9 1 Y tyrosine 2.0 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinoblastoma binding protein 5 SNRNP40 0.047 WD repeat domain 57 (U5 snRNP specific) WDR5B 0.040 WD repeat domain 5B WDR5 0.039 WD repeat domain 5 WDR5 0.039 WD repeat domain 5 TBL1XR1 0.038 transducin (beta)-like 1 X-linked receptor 1 TBL1X 0.037 transducin beta-like 1X isoform b TBL1X 0.037 transducin beta-like 1X isoform b TBL1X 0.037 transducin beta-like 1X isoform a TBL1X 0.037 transducin beta-like 1X isoform a TBL1Y 0.037 transducin beta-like 1Y TBL1Y 0.037 transducin beta-like 1Y TBL1Y 0.037 transducin beta-like 1Y AHI1 0.036 Abelson helper integration site 1 isoform b AHI1 0.036 Abelson helper integration site 1 isoform a AHI1 0.036 Abelson helper integration site 1 isoform a AHI1 0.036 Abelson helper integration site 1 isoform a WDR44 0.035 WD repeat domain 44 protein TAF5 0.030 TBP-associated factor 5 SMU1 0.029 smu-1 suppressor of mec-8 and unc-52 homolog PWP2 0.028 PWP2 periodic tryptophan protein homolog WSB1 0.028 WD repeat and SOCS box-containing 1 isoform 1 WDR69 0.026 WD repeat domain 69 ATG16L1 0.026 APG16 autophagy 16-like isoform 1 ATG16L1 0.026 APG16 autophagy 16-like isoform 2 KATNB1 0.023 katanin p80 subunit B 1 APAF1 0.022 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.022 apoptotic peptidase activating factor 1 isoform b [Ho... TLE1 0.022 transducin-like enhancer protein 1 TLE4 0.022 transducin-like enhancer protein 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.